RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 SEPT12Q8IYM1 358 aa15.82■□□□□ 0.12
LIG1-203ENST00000536218 CLIC6Q96NY7 704 aa15.82■□□□□ 0.12
LIG1-203ENST00000536218 PNKPQ96T60 521 aa15.82■□□□□ 0.12
LIG1-203ENST00000536218 SLC12A7Q9Y666 1083 aa15.82■□□□□ 0.12
LIG1-203ENST00000536218 PRDM1O75626 825 aa15.82■□□□□ 0.12
LIG1-203ENST00000536218 FANCCQ00597 558 aa15.82■□□□□ 0.12
LIG1-203ENST00000536218 ALX1Q15699 326 aa15.82■□□□□ 0.12
LIG1-203ENST00000536218 NUP133Q8WUM0 1156 aa15.82■□□□□ 0.12
LIG1-203ENST00000536218 ALG1Q9BT22 464 aa15.82■□□□□ 0.12
LIG1-203ENST00000536218 LY9Q9HBG7 655 aa15.82■□□□□ 0.12
LIG1-203ENST00000536218 MYH7P12883 1935 aa15.82■□□□□ 0.12
LIG1-203ENST00000536218 CASP8Q14790 479 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 SLC10A5Q5PT55 438 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 SLC24A3Q9HC58 644 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 ATRNO75882 1429 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 H0YHG0 523 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 HSPA1LP34931 641 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 KCNV1Q6PIU1 500 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 FAM71BQ8TC56 605 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 IRX2Q9BZI1 471 aaPredicted RBP15.81■□□□□ 0.12
LIG1-203ENST00000536218 ANKIB1Q9P2G1 1089 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 CLIC4Q9Y696 253 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 DDX60Q8IY21 1712 aaKnown RBP15.81■□□□□ 0.12
LIG1-203ENST00000536218 CPLX2Q6PUV4 134 aaKnown RBP15.81■□□□□ 0.12
LIG1-203ENST00000536218 SGSM3Q96HU1 749 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 TMEM87BQ96K49 555 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 GPR101Q96P66 508 aaPredicted RBP15.81■□□□□ 0.12
LIG1-203ENST00000536218 DESI2Q9BSY9 194 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 RCOR1Q9UKL0 485 aa15.81■□□□□ 0.12
LIG1-203ENST00000536218 KIF28PB7ZC32 967 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 NEBLO76041 1014 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 HIBADHP31937 336 aaKnown RBP15.8■□□□□ 0.12
LIG1-203ENST00000536218 UBASH3AP57075 661 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 FAM160A1Q05DH4 1040 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 BIRC2Q13490 618 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 STK38Q15208 465 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 SYNE3Q6ZMZ3 975 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 AFAP1L1Q8TED9 768 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 SLC26A6Q9BXS9 759 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 FAM107BQ9H098 131 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 LRRC4BQ9NT99 713 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 ZMYM6O95789 1325 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 A0A1B0GVL5 298 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 RNF40O75150 1001 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 TOP1P11387 765 aaKnown RBP15.8■□□□□ 0.12
LIG1-203ENST00000536218 GNAT2P19087 354 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 IARSP41252 1262 aaKnown RBP15.8■□□□□ 0.12
LIG1-203ENST00000536218 PPARAQ07869 468 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 HSP90AA4PQ58FG1 418 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 ANKZF1Q9H8Y5 726 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 L1RE1Q9UN81 338 aa15.8■□□□□ 0.12
LIG1-203ENST00000536218 KRT23Q9C075 422 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 AATFQ9NY61 560 aaKnown RBP eCLIP15.79■□□□□ 0.12
LIG1-203ENST00000536218 FAM169AQ9Y6X4 670 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 ZNF804BA4D1E1 1349 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 ERICH2A1L162 156 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 PRDX5P30044 214 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 NFIXQ14938 502 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 DPF2Q92785 391 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 ACBD3Q9H3P7 528 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 LRP5O75197 1615 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.79■□□□□ 0.12
LIG1-203ENST00000536218 EBAG9O00559 213 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 EVX2Q03828 476 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 WTAPQ15007 396 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 ZNF384Q8TF68 577 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 CNNM2Q9H8M5 875 aa15.79■□□□□ 0.12
LIG1-203ENST00000536218 RANBP6O60518 1105 aaKnown RBP15.78■□□□□ 0.12
LIG1-203ENST00000536218 RDXP35241 583 aaKnown RBP15.78■□□□□ 0.12
LIG1-203ENST00000536218 TOGARAM2Q6ZUX3 1019 aa15.78■□□□□ 0.12
LIG1-203ENST00000536218 LZTFL1Q9NQ48 299 aa15.78■□□□□ 0.12
LIG1-203ENST00000536218 PCDHA7Q9UN72 937 aa15.78■□□□□ 0.12
LIG1-203ENST00000536218 PNPLA7Q6ZV29 1317 aa15.78■□□□□ 0.12
LIG1-203ENST00000536218 TFRCP02786 760 aaKnown RBP15.78■□□□□ 0.12
LIG1-203ENST00000536218 INPP5BP32019 993 aa15.78■□□□□ 0.12
LIG1-203ENST00000536218 ATP2B2Q01814 1243 aa15.78■□□□□ 0.12
LIG1-203ENST00000536218 KRT40Q6A162 431 aa15.78■□□□□ 0.12
LIG1-203ENST00000536218 SRGAP1Q7Z6B7 1085 aa15.78■□□□□ 0.12
LIG1-203ENST00000536218 UBAC1Q9BSL1 405 aa15.78■□□□□ 0.12
LIG1-203ENST00000536218 SPATA31A6Q5VVP1 1343 aa15.78■□□□□ 0.12
LIG1-203ENST00000536218 WDR19Q8NEZ3 1342 aa15.78■□□□□ 0.12
LIG1-203ENST00000536218 COL1A1P02452 1464 aaPredicted RBP15.78■□□□□ 0.12
LIG1-203ENST00000536218 MARCKSP29966 332 aaPredicted RBP15.77■□□□□ 0.12
LIG1-203ENST00000536218 VSNL1P62760 191 aa15.77■□□□□ 0.12
LIG1-203ENST00000536218 MECOMQ03112 1051 aa15.77■□□□□ 0.12
LIG1-203ENST00000536218 FAM43BQ6ZT52 329 aaPredicted RBP15.77■□□□□ 0.12
LIG1-203ENST00000536218 FBXO33Q7Z6M2 555 aa15.77■□□□□ 0.12
LIG1-203ENST00000536218 FAM217BQ9NTX9 383 aaPredicted RBP15.77■□□□□ 0.12
LIG1-203ENST00000536218 CAPN7Q9Y6W3 813 aa15.77■□□□□ 0.12
LIG1-203ENST00000536218 PPP1R12AO14974 1030 aaPredicted RBP15.77■□□□□ 0.12
LIG1-203ENST00000536218 CDKL5O76039 1030 aa15.77■□□□□ 0.12
LIG1-203ENST00000536218 MYSM1Q5VVJ2 828 aa15.77■□□□□ 0.12
LIG1-203ENST00000536218 CNBD1Q8NA66 436 aa15.77■□□□□ 0.12
LIG1-203ENST00000536218 RIOK1Q9BRS2 568 aaKnown RBP15.77■□□□□ 0.12
LIG1-203ENST00000536218 TMEM232C9JQI7 657 aa15.77■□□□□ 0.11
LIG1-203ENST00000536218 ARHGAP6O43182 974 aa15.77■□□□□ 0.11
LIG1-203ENST00000536218 TM4SF1P30408 202 aa15.77■□□□□ 0.11
LIG1-203ENST00000536218 KIF23Q02241 960 aaPredicted RBP15.77■□□□□ 0.11
LIG1-203ENST00000536218 STAG1Q8WVM7 1258 aa15.77■□□□□ 0.11
LIG1-203ENST00000536218 GDAP1L1Q96MZ0 367 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms