RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 CARMIL3Q8ND23 1372 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 KCPQ6ZWJ8 1503 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 TJP1Q07157 1748 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 A0A0G2JLW4 131 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 A0A1B0GUL7 405 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 GOLGA6L19H0YKK7 550 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 KINO60870 393 aaKnown RBP6.65□□□□□ -1.34
VPS33A-203ENST00000536212 ADAM23O75077 832 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 TNNT1P13805 278 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 KCNJ6P48051 423 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 CLDN10P78369 228 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 CCT2P78371 535 aaKnown RBP6.65□□□□□ -1.34
VPS33A-203ENST00000536212 LRRC24Q50LG9 513 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 RNFT1Q5M7Z0 435 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 UTP14CQ5TAP6 766 aaKnown RBP6.65□□□□□ -1.34
VPS33A-203ENST00000536212 DRC7Q8IY82 874 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 MB21D2Q8IYB1 491 aaPredicted RBP6.65□□□□□ -1.34
VPS33A-203ENST00000536212 LARGE2Q8N3Y3 721 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 FSIP1Q8NA03 581 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 MRPS27Q92552 414 aaKnown RBP6.65□□□□□ -1.34
VPS33A-203ENST00000536212 APPBP2Q92624 585 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 SCARF2Q96GP6 870 aaPredicted RBP6.65□□□□□ -1.34
VPS33A-203ENST00000536212 ZNF512BQ96KM6 892 aaPredicted RBP6.65□□□□□ -1.34
VPS33A-203ENST00000536212 KCTD15Q96SI1 283 aaPredicted RBP6.65□□□□□ -1.34
VPS33A-203ENST00000536212 IGSF5Q9NSI5 407 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 IMPACTQ9P2X3 320 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 PCDHA7Q9UN72 937 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 AKAP2Q9Y2D5 859 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 PCDHB11Q9Y5F2 797 aa6.65□□□□□ -1.34
VPS33A-203ENST00000536212 PAPPAQ13219 1627 aa6.65□□□□□ -1.35
VPS33A-203ENST00000536212 NUP188Q5SRE5 1749 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 AFDNP55196 1824 aaKnown RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 SETD1BQ9UPS6 1966 aaKnown RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 FAM237AA0A1B0GTK4 181 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 DHX16O60231 1041 aaKnown RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 PCCAP05165 728 aaPredicted RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 CSF1RP07333 972 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 NR3C2P08235 984 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 MARSP56192 900 aaKnown RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 GSDMDP57764 484 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 GTF2IP78347 998 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 CCZ1BP86790 482 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 CCZ1P86791 482 aaPredicted RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 NCBP1Q09161 790 aaKnown RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 DPYDQ12882 1025 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 USP4Q13107 963 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 TCIRG1Q13488 830 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 DHX8Q14562 1220 aaKnown RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 IMMTQ16891 758 aaKnown RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 TTLL5Q6EMB2 1281 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 VASH1Q7L8A9 365 aaPredicted RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 BRAPQ7Z569 592 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 CEP57L1Q8IYX8 460 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 PDCL2Q8N4E4 241 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 FBXO18Q8NFZ0 1043 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 KCNG4Q8TDN1 519 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 IPO4Q8TEX9 1081 aaKnown RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 WHAMMQ8TF30 809 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 NEUROD6Q96NK8 337 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 FEZ1Q99689 392 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 PUS3Q9BZE2 481 aaKnown RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 FTOQ9C0B1 505 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 NCOA5Q9HCD5 579 aaKnown RBP6.64□□□□□ -1.35
VPS33A-203ENST00000536212 NEDD4P46934 1319 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 PCDH11XQ9BZA7 1347 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 PCDH11YQ9BZA8 1340 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 UBR2Q8IWV8 1755 aa6.64□□□□□ -1.35
VPS33A-203ENST00000536212 CCDC69A6NI79 296 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 BECN2A8MW95 431 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 KIF2AO00139 706 aaPredicted RBP6.63□□□□□ -1.35
VPS33A-203ENST00000536212 PRC1O43663 620 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 ATRNO75882 1429 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 FGAP02671 866 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 A1BGP04217 495 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 ATF3P18847 181 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 CMA1P23946 247 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 GRM5P41594 1212 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 ANTXR2P58335 489 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 RAB15P59190 212 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 PTSQ03393 145 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 CEBPZQ03701 1054 aaKnown RBP6.63□□□□□ -1.35
VPS33A-203ENST00000536212 CHRNA2Q15822 529 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 LAMA4Q16363 1823 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 ATP2B3Q16720 1220 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 CCDC158Q5M9N0 1113 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 AXDND1Q5T1B0 1012 aaPredicted RBP6.63□□□□□ -1.35
VPS33A-203ENST00000536212 NBPF11Q86T75 865 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 SIX5Q8N196 739 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 NCOA7Q8NI08 942 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 ZCRB1Q8TBF4 217 aaKnown RBP6.63□□□□□ -1.35
VPS33A-203ENST00000536212 CLP1Q92989 425 aaKnown RBP6.63□□□□□ -1.35
VPS33A-203ENST00000536212 XAGE2Q96GT9 111 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 C8orf76Q96K31 380 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 TIGD1Q96MW7 591 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 CDHR2Q9BYE9 1310 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 NAT10Q9H0A0 1025 aaKnown RBP6.63□□□□□ -1.35
VPS33A-203ENST00000536212 MAP4K5Q9Y4K4 846 aa6.63□□□□□ -1.35
VPS33A-203ENST00000536212 WDR17Q8IZU2 1322 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 FAM177BA6PVY3 158 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms