RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 NFIBO00712 420 aa6.12□□□□□ -1.43
YBX3-205ENST00000536107 EREGO14944 169 aa6.12□□□□□ -1.43
YBX3-205ENST00000536107 ARHGEF10O15013 1369 aa6.12□□□□□ -1.43
YBX3-205ENST00000536107 CEACAM5P06731 702 aa6.12□□□□□ -1.43
YBX3-205ENST00000536107 OXCT1P55809 520 aa6.12□□□□□ -1.43
YBX3-205ENST00000536107 TNS2Q63HR2 1409 aa6.12□□□□□ -1.43
YBX3-205ENST00000536107 TNS3Q68CZ2 1445 aa6.12□□□□□ -1.43
YBX3-205ENST00000536107 PRR23BQ6ZRT6 265 aa6.12□□□□□ -1.43
YBX3-205ENST00000536107 LMTK2Q8IWU2 1503 aa6.12□□□□□ -1.43
YBX3-205ENST00000536107 NALCNQ8IZF0 1738 aa6.12□□□□□ -1.43
YBX3-205ENST00000536107 XRN1Q8IZH2 1706 aaKnown RBP6.12□□□□□ -1.43
YBX3-205ENST00000536107 PMFBP1Q8TBY8 1022 aa6.12□□□□□ -1.43
YBX3-205ENST00000536107 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
YBX3-205ENST00000536107 GLI1P08151 1106 aa6.11□□□□□ -1.43
YBX3-205ENST00000536107 AFMP43652 599 aa6.11□□□□□ -1.43
YBX3-205ENST00000536107 PCDH1Q08174 1060 aa6.11□□□□□ -1.43
YBX3-205ENST00000536107 CDK5R2Q13319 367 aa6.11□□□□□ -1.43
YBX3-205ENST00000536107 TXNRD1Q16881 649 aa6.11□□□□□ -1.43
YBX3-205ENST00000536107 EDEM1Q92611 657 aa6.11□□□□□ -1.43
YBX3-205ENST00000536107 CLEC4MQ9H2X3 399 aaPredicted RBP6.11□□□□□ -1.43
YBX3-205ENST00000536107 PLAGL2Q9UPG8 496 aa6.11□□□□□ -1.43
YBX3-205ENST00000536107 CTNND2Q9UQB3 1225 aa6.11□□□□□ -1.43
YBX3-205ENST00000536107 SNX11Q9Y5W9 270 aa6.11□□□□□ -1.43
YBX3-205ENST00000536107 NWD2Q9ULI1 1742 aa6.11□□□□□ -1.43
YBX3-205ENST00000536107 PLCH1Q4KWH8 1693 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 NEXMIFQ5QGS0 1516 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 A6NHS1 94 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 AOC2O75106 756 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 ELOAQ14241 798 aaKnown RBP6.1□□□□□ -1.43
YBX3-205ENST00000536107 CHRNA2Q15822 529 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 ZNF423Q2M1K9 1284 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 C8orf34Q49A92 452 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 CFAP70Q5T0N1 1121 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 FBXO15Q8NCQ5 510 aaPredicted RBP6.1□□□□□ -1.43
YBX3-205ENST00000536107 TTC16Q8NEE8 873 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 CORO1BQ9BR76 489 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 TNKS2Q9H2K2 1166 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 PRDM7Q9NQW5 492 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 CASZ1Q86V15 1759 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 GCC2Q8IWJ2 1684 aa6.1□□□□□ -1.43
YBX3-205ENST00000536107 HFM1A2PYH4 1435 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 TECPR2O15040 1411 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 RRBP1Q9P2E9 1410 aaKnown RBP6.09□□□□□ -1.43
YBX3-205ENST00000536107 USP19O94966 1318 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 CCDC85CA6NKD9 419 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 METTL12A8MUP2 240 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 PDGFAP04085 211 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 DNM1Q05193 864 aaKnown RBP6.09□□□□□ -1.43
YBX3-205ENST00000536107 FYB2Q5VWT5 728 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 PEAR1Q5VY43 1037 aaPredicted RBP6.09□□□□□ -1.43
YBX3-205ENST00000536107 MPZL3Q6UWV2 235 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 ARHGAP27Q6ZUM4 889 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 PTF1AQ7RTS3 328 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 TCP11L2Q8N4U5 519 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 TRIM56Q9BRZ2 755 aaKnown RBP6.09□□□□□ -1.43
YBX3-205ENST00000536107 WDR18Q9BV38 432 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 ZMIZ1Q9ULJ6 1067 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 PPP1R9AQ9ULJ8 1098 aa6.09□□□□□ -1.43
YBX3-205ENST00000536107 ADCY9O60503 1353 aa6.08□□□□□ -1.44
YBX3-205ENST00000536107 THSD7AQ9UPZ6 1657 aa6.08□□□□□ -1.44
YBX3-205ENST00000536107 NPIPB6E9PJ23 425 aa6.08□□□□□ -1.44
YBX3-205ENST00000536107 PHACTR2O75167 634 aa6.08□□□□□ -1.44
YBX3-205ENST00000536107 ECEL1O95672 775 aa6.08□□□□□ -1.44
YBX3-205ENST00000536107 MZF1P28698 734 aaPredicted RBP6.08□□□□□ -1.44
YBX3-205ENST00000536107 CDCA8Q53HL2 280 aa6.08□□□□□ -1.44
YBX3-205ENST00000536107 CSRNP1Q96S65 589 aa6.08□□□□□ -1.44
YBX3-205ENST00000536107 STK26Q9P289 416 aa6.08□□□□□ -1.44
YBX3-205ENST00000536107 MYOM3Q5VTT5 1437 aa6.08□□□□□ -1.44
YBX3-205ENST00000536107 SBNO1A3KN83 1393 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 DHX57Q6P158 1386 aaKnown RBP6.07□□□□□ -1.44
YBX3-205ENST00000536107 A0A096LPE4 126 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 A0A1W2PPZ6 126 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 TNFRSF21O75509 655 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 HOXA5P20719 270 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 FSTL1Q12841 308 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 KCNA10Q16322 511 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 DDX54Q8TDD1 881 aaKnown RBP6.07□□□□□ -1.44
YBX3-205ENST00000536107 SNX29Q8TEQ0 813 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 ASB11Q8WXH4 323 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 CLUAP1Q96AJ1 413 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 C20orf173Q96LM9 149 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 CD320Q9NPF0 282 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 NMRK2Q9NPI5 230 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 LATS2Q9NRM7 1088 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 OVOS2A0A0G2JMS6 1433 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 OVOS2A0A0J9YW53 1432 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 PCNTO95613 3336 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 NAIPQ13075 1403 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 OVOS2Q6IE36 1432 aa6.07□□□□□ -1.44
YBX3-205ENST00000536107 ANKRD30AQ9BXX3 1397 aa6.06□□□□□ -1.44
YBX3-205ENST00000536107 MYO5BQ9ULV0 1848 aa6.06□□□□□ -1.44
YBX3-205ENST00000536107 TMPRSS2O15393 492 aa6.06□□□□□ -1.44
YBX3-205ENST00000536107 LEFTY1O75610 366 aa6.06□□□□□ -1.44
YBX3-205ENST00000536107 ZC3H6P61129 1189 aaKnown RBP6.06□□□□□ -1.44
YBX3-205ENST00000536107 ZP2Q05996 745 aa6.06□□□□□ -1.44
YBX3-205ENST00000536107 DDB1Q16531 1140 aa6.06□□□□□ -1.44
YBX3-205ENST00000536107 CIAPIN1Q6FI81 312 aa6.06□□□□□ -1.44
YBX3-205ENST00000536107 DBX2Q6ZNG2 339 aa6.06□□□□□ -1.44
YBX3-205ENST00000536107 WAPLQ7Z5K2 1190 aa6.06□□□□□ -1.44
YBX3-205ENST00000536107 RELTQ969Z4 430 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms