RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 NEK4P51957 841 aa12.7□□□□□ -0.38
UBE3B-205ENST00000535900 GPAT2Q6NUI2 795 aa12.7□□□□□ -0.38
UBE3B-205ENST00000535900 CCDC84Q86UT8 332 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-205ENST00000535900 FOXP4Q8IVH2 680 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-205ENST00000535900 ESR2Q92731 530 aa12.7□□□□□ -0.38
UBE3B-205ENST00000535900 PI4KBQ9UBF8 816 aa12.7□□□□□ -0.38
UBE3B-205ENST00000535900 BIN2Q9UBW5 565 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-205ENST00000535900 AFG3L2Q9Y4W6 797 aa12.7□□□□□ -0.38
UBE3B-205ENST00000535900 DDX60LQ5H9U9 1706 aaKnown RBP12.7□□□□□ -0.38
UBE3B-205ENST00000535900 SIPA1L1O43166 1804 aa12.69□□□□□ -0.38
UBE3B-205ENST00000535900 RPS6KB1P23443 525 aa12.69□□□□□ -0.38
UBE3B-205ENST00000535900 HAND2P61296 217 aa12.69□□□□□ -0.38
UBE3B-205ENST00000535900 PRKCZQ05513 592 aa12.69□□□□□ -0.38
UBE3B-205ENST00000535900 ADCK5Q3MIX3 580 aa12.69□□□□□ -0.38
UBE3B-205ENST00000535900 CCDC178Q5BJE1 867 aa12.69□□□□□ -0.38
UBE3B-205ENST00000535900 C16orf86Q6ZW13 317 aa12.69□□□□□ -0.38
UBE3B-205ENST00000535900 METTL16Q86W50 562 aaKnown RBP12.69□□□□□ -0.38
UBE3B-205ENST00000535900 NBPF3Q9H094 633 aa12.69□□□□□ -0.38
UBE3B-205ENST00000535900 SERPINB13Q9UIV8 391 aa12.69□□□□□ -0.38
UBE3B-205ENST00000535900 PNMA3Q9UL41 463 aa12.69□□□□□ -0.38
UBE3B-205ENST00000535900 AGTPBP1Q9UPW5 1226 aa12.69□□□□□ -0.38
UBE3B-205ENST00000535900 SLC45A1Q9Y2W3 748 aa12.69□□□□□ -0.38
UBE3B-205ENST00000535900 TNPO2O14787 897 aaKnown RBP12.68□□□□□ -0.38
UBE3B-205ENST00000535900 UBXN2AP68543 259 aa12.68□□□□□ -0.38
UBE3B-205ENST00000535900 EXOSC10Q01780 885 aaKnown RBP12.68□□□□□ -0.38
UBE3B-205ENST00000535900 MAP3K10Q02779 954 aa12.68□□□□□ -0.38
UBE3B-205ENST00000535900 SART3Q15020 963 aaKnown RBP12.68□□□□□ -0.38
UBE3B-205ENST00000535900 MTFR1Q15390 333 aa12.68□□□□□ -0.38
UBE3B-205ENST00000535900 PPP4R3BQ5MIZ7 849 aa12.68□□□□□ -0.38
UBE3B-205ENST00000535900 STOX1Q6ZVD7 989 aa12.68□□□□□ -0.38
UBE3B-205ENST00000535900 TBC1D10CQ8IV04 446 aa12.68□□□□□ -0.38
UBE3B-205ENST00000535900 SLAIN1Q8ND83 568 aa12.68□□□□□ -0.38
UBE3B-205ENST00000535900 CHMP4CQ96CF2 233 aa12.68□□□□□ -0.38
UBE3B-205ENST00000535900 TMEM87BQ96K49 555 aa12.68□□□□□ -0.38
UBE3B-205ENST00000535900 TRIM34Q9BYJ4 488 aa12.68□□□□□ -0.38
UBE3B-205ENST00000535900 PDRG1Q9NUG6 133 aa12.68□□□□□ -0.38
UBE3B-205ENST00000535900 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
UBE3B-205ENST00000535900 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBE3B-205ENST00000535900 MKI67P46013 3256 aaKnown RBP12.68□□□□□ -0.38
UBE3B-205ENST00000535900 TBC1D12O60347 775 aa12.67□□□□□ -0.38
UBE3B-205ENST00000535900 CTDSPL2Q05D32 466 aa12.67□□□□□ -0.38
UBE3B-205ENST00000535900 GABPAQ06546 454 aa12.67□□□□□ -0.38
UBE3B-205ENST00000535900 HSCBQ8IWL3 235 aa12.67□□□□□ -0.38
UBE3B-205ENST00000535900 MB21D2Q8IYB1 491 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-205ENST00000535900 TMTC2Q8N394 836 aa12.67□□□□□ -0.38
UBE3B-205ENST00000535900 PROCA1Q8NCQ7 364 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-205ENST00000535900 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
UBE3B-205ENST00000535900 CCDC17Q96LX7 622 aa12.67□□□□□ -0.38
UBE3B-205ENST00000535900 TTC14Q96N46 770 aa12.67□□□□□ -0.38
UBE3B-205ENST00000535900 TBC1D2Q9BYX2 928 aa12.67□□□□□ -0.38
UBE3B-205ENST00000535900 MKNK2Q9HBH9 465 aa12.67□□□□□ -0.38
UBE3B-205ENST00000535900 SAP30BPQ9UHR5 308 aaKnown RBP12.67□□□□□ -0.38
UBE3B-205ENST00000535900 CCL5P13501 91 aa12.66□□□□□ -0.38
UBE3B-205ENST00000535900 PABPC4Q13310 644 aaKnown RBP eCLIP12.66□□□□□ -0.38
UBE3B-205ENST00000535900 HABP4Q5JVS0 413 aaKnown RBP12.66□□□□□ -0.38
UBE3B-205ENST00000535900 TREML2Q5T2D2 321 aa12.66□□□□□ -0.38
UBE3B-205ENST00000535900 IQCA1Q86XH1 822 aa12.66□□□□□ -0.38
UBE3B-205ENST00000535900 ZNF444Q8N0Y2 327 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-205ENST00000535900 CRACR2BQ8N4Y2 399 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-205ENST00000535900 ANKRD13CQ8N6S4 541 aa12.66□□□□□ -0.38
UBE3B-205ENST00000535900 ZNF280CQ8ND82 737 aa12.66□□□□□ -0.38
UBE3B-205ENST00000535900 SHISA4Q96DD7 197 aa12.66□□□□□ -0.38
UBE3B-205ENST00000535900 ZSCAN31Q96LW9 406 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-205ENST00000535900 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
UBE3B-205ENST00000535900 UPF3BQ9BZI7 483 aaKnown RBP12.66□□□□□ -0.38
UBE3B-205ENST00000535900 RNF208Q9H0X6 261 aa12.66□□□□□ -0.38
UBE3B-205ENST00000535900 AS3MTQ9HBK9 375 aa12.66□□□□□ -0.38
UBE3B-205ENST00000535900 GABRQQ9UN88 632 aa12.66□□□□□ -0.38
UBE3B-205ENST00000535900 TAF6LQ9Y6J9 622 aa12.66□□□□□ -0.38
UBE3B-205ENST00000535900 CYP2D7A0A087X1C5 515 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 ERICH2A1L162 156 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 PRC1O43663 620 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 CYP2D6P10635 497 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 CAP2P40123 477 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 LIFRP42702 1097 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 CDK8P49336 464 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 PLCD1P51178 756 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 HMGCS2P54868 508 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 FGD1P98174 961 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 SPP2Q13103 211 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 SH2B1Q9NRF2 756 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-205ENST00000535900 TOMM22Q9NS69 142 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 TCP11L1Q9NUJ3 509 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 LIMCH1Q9UPQ0 1083 aa12.65□□□□□ -0.38
UBE3B-205ENST00000535900 NEDD4P46934 1319 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 B4E1Z4 1266 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 ADCY3O60266 1144 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 KDM4AO75164 1064 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 INHAP05111 366 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 FLT3LGP49771 235 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 RCAN1P53805 252 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 EVCP57679 992 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 FAM110CQ1W6H9 321 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 COA7Q96BR5 231 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 UBAC1Q9BSL1 405 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 GINM1Q9NU53 330 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 ZSWIM5Q9P217 1185 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 PLIN4Q96Q06 1357 aa12.64□□□□□ -0.39
UBE3B-205ENST00000535900 TSPY2A6NKD2 308 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms