RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 ZSCAN23Q3MJ62 389 aa24.28■■□□□ 1.48
PDXDC1-205ENST00000535621 FTOQ9C0B1 505 aaKnown RBP eCLIP24.28■■□□□ 1.48
PDXDC1-205ENST00000535621 TAOK2Q9UL54 1235 aa24.28■■□□□ 1.48
PDXDC1-205ENST00000535621 CNTNAP5Q8WYK1 1306 aa24.28■■□□□ 1.48
PDXDC1-205ENST00000535621 AKR1B1P15121 316 aa24.27■■□□□ 1.48
PDXDC1-205ENST00000535621 GRM4Q14833 912 aa24.27■■□□□ 1.48
PDXDC1-205ENST00000535621 SHROOM1Q2M3G4 852 aaPredicted RBP24.27■■□□□ 1.48
PDXDC1-205ENST00000535621 TMOD2Q9NZR1 351 aa24.27■■□□□ 1.48
PDXDC1-205ENST00000535621 PI4KBQ9UBF8 816 aa24.27■■□□□ 1.48
PDXDC1-205ENST00000535621 V9GY48 417 aaPredicted RBP24.27■■□□□ 1.48
PDXDC1-205ENST00000535621 U2AF2P26368 475 aaKnown RBP eCLIP24.27■■□□□ 1.489e-7■■■□□ 17.9
PDXDC1-205ENST00000535621 MYSM1Q5VVJ2 828 aa24.27■■□□□ 1.48
PDXDC1-205ENST00000535621 GPC2Q8N158 579 aa24.27■■□□□ 1.48
PDXDC1-205ENST00000535621 TMEM39BQ9GZU3 492 aa24.27■■□□□ 1.48
PDXDC1-205ENST00000535621 IGKV6D-41A0A0C4DH26 115 aa24.26■■□□□ 1.47
PDXDC1-205ENST00000535621 ENTPD3O75355 529 aa24.26■■□□□ 1.47
PDXDC1-205ENST00000535621 MMP1P03956 469 aa24.26■■□□□ 1.47
PDXDC1-205ENST00000535621 CEBPZQ03701 1054 aaKnown RBP24.26■■□□□ 1.47
PDXDC1-205ENST00000535621 TRPM4Q8TD43 1214 aa24.26■■□□□ 1.47
PDXDC1-205ENST00000535621 MAD2L2Q9UI95 211 aa24.26■■□□□ 1.47
PDXDC1-205ENST00000535621 RCOR1Q9UKL0 485 aa24.26■■□□□ 1.47
PDXDC1-205ENST00000535621 TOP1P11387 765 aaKnown RBP24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 EPS15P42566 896 aa24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 TPRNQ4KMQ1 711 aa24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 CLEC10AQ8IUN9 316 aa24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 MTMR4Q9NYA4 1195 aa24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 GPRC5DQ9NZD1 345 aa24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 ATRNL1Q5VV63 1379 aa24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 hCG_1642624A0A1W2PR95 340 aa24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 FSD2A1L4K1 749 aa24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 KIF4BQ2VIQ3 1234 aa24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 STAG2Q8N3U4 1231 aa24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 KCNJ14Q9UNX9 436 aa24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 BAZ2BQ9UIF8 2168 aaKnown RBP24.25■■□□□ 1.47
PDXDC1-205ENST00000535621 POLR2AP24928 1970 aaKnown RBP24.24■■□□□ 1.47
PDXDC1-205ENST00000535621 COL2A1P02458 1487 aaPredicted RBP24.24■■□□□ 1.47
PDXDC1-205ENST00000535621 SHISA4Q96DD7 197 aa24.24■■□□□ 1.47
PDXDC1-205ENST00000535621 RTEL1Q9NZ71 1219 aa24.24■■□□□ 1.47
PDXDC1-205ENST00000535621 GREB1LQ9C091 1923 aaPredicted RBP24.24■■□□□ 1.47
PDXDC1-205ENST00000535621 ZNF445P59923 1031 aa24.23■■□□□ 1.47
PDXDC1-205ENST00000535621 SYAP1Q96A49 352 aaPredicted RBP24.23■■□□□ 1.47
PDXDC1-205ENST00000535621 PGBD1Q96JS3 809 aa24.23■■□□□ 1.47
PDXDC1-205ENST00000535621 CSRNP1Q96S65 589 aa24.23■■□□□ 1.47
PDXDC1-205ENST00000535621 MYO1BO43795 1136 aa24.23■■□□□ 1.47
PDXDC1-205ENST00000535621 GNAQP50148 359 aa24.23■■□□□ 1.47
PDXDC1-205ENST00000535621 METTL16Q86W50 562 aaKnown RBP24.23■■□□□ 1.47
PDXDC1-205ENST00000535621 PALM3A6NDB9 673 aaPredicted RBP24.22■■□□□ 1.47
PDXDC1-205ENST00000535621 GNL2Q13823 731 aaKnown RBP24.22■■□□□ 1.47
PDXDC1-205ENST00000535621 SAFBQ15424 915 aaKnown RBP eCLIP24.22■■□□□ 1.47
PDXDC1-205ENST00000535621 FOXP4Q8IVH2 680 aaPredicted RBP24.22■■□□□ 1.47
PDXDC1-205ENST00000535621 FAM151AQ8WW52 585 aa24.22■■□□□ 1.47
PDXDC1-205ENST00000535621 CCDC17Q96LX7 622 aa24.22■■□□□ 1.47
PDXDC1-205ENST00000535621 POLR3EQ9NVU0 708 aa24.22■■□□□ 1.47
PDXDC1-205ENST00000535621 XBP1P17861 261 aa24.22■■□□□ 1.47
PDXDC1-205ENST00000535621 GAS2L3Q86XJ1 694 aa24.22■■□□□ 1.47
PDXDC1-205ENST00000535621 DIS3L2Q8IYB7 885 aaKnown RBP24.22■■□□□ 1.47
PDXDC1-205ENST00000535621 VPS54Q9P1Q0 977 aa24.22■■□□□ 1.47
PDXDC1-205ENST00000535621 GOLGA6L3A6NEY3 463 aa24.21■■□□□ 1.47
PDXDC1-205ENST00000535621 BTBD18B2RXH4 712 aa24.21■■□□□ 1.47
PDXDC1-205ENST00000535621 H7C1D1 291 aa24.21■■□□□ 1.47
PDXDC1-205ENST00000535621 HIRAP54198 1017 aaPredicted RBP24.21■■□□□ 1.47
PDXDC1-205ENST00000535621 RRP1BQ14684 758 aaKnown RBP24.21■■□□□ 1.47
PDXDC1-205ENST00000535621 RASGRP2Q7LDG7 609 aa24.21■■□□□ 1.47
PDXDC1-205ENST00000535621 FOXP1Q9H334 677 aaPredicted RBP24.21■■□□□ 1.47
PDXDC1-205ENST00000535621 HACL1Q9UJ83 578 aa24.21■■□□□ 1.47
PDXDC1-205ENST00000535621 MTMR7Q9Y216 660 aa24.21■■□□□ 1.47
PDXDC1-205ENST00000535621 CLIC4Q9Y696 253 aa24.21■■□□□ 1.47
PDXDC1-205ENST00000535621 GOLGA6L4A6NEF3 574 aa24.2■■□□□ 1.47
PDXDC1-205ENST00000535621 TATDN1Q6P1N9 297 aa24.2■■□□□ 1.47
PDXDC1-205ENST00000535621 NOSTRINQ8IVI9 506 aa24.2■■□□□ 1.47
PDXDC1-205ENST00000535621 PHF20Q9BVI0 1012 aa24.2■■□□□ 1.47
PDXDC1-205ENST00000535621 PGAP2Q9UHJ9 254 aa24.2■■□□□ 1.47
PDXDC1-205ENST00000535621 TTLL1O95922 423 aa24.2■■□□□ 1.46
PDXDC1-205ENST00000535621 NASPP49321 788 aaPredicted RBP24.2■■□□□ 1.46
PDXDC1-205ENST00000535621 PFKFB3Q16875 520 aaPredicted RBP24.2■■□□□ 1.46
PDXDC1-205ENST00000535621 SLC35G1Q2M3R5 365 aa24.2■■□□□ 1.46
PDXDC1-205ENST00000535621 LINC00301Q8NCQ3 95 aa24.2■■□□□ 1.46
PDXDC1-205ENST00000535621 ISY1Q9ULR0 285 aaKnown RBP24.2■■□□□ 1.46
PDXDC1-205ENST00000535621 MYH4Q9Y623 1939 aa24.19■■□□□ 1.46
PDXDC1-205ENST00000535621 SCG2P13521 617 aa24.19■■□□□ 1.46
PDXDC1-205ENST00000535621 JAG1P78504 1218 aa24.19■■□□□ 1.46
PDXDC1-205ENST00000535621 RASA3Q14644 834 aa24.19■■□□□ 1.46
PDXDC1-205ENST00000535621 MPHOSPH10O00566 681 aaKnown RBP24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 YEATS4O95619 227 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 GOLGA8HP0CJ92 632 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 CERKLQ49MI3 558 aaPredicted RBP24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 FKBP1CQ5VVH2 108 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 MIGA2Q7L4E1 593 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 LZTS2Q9BRK4 669 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 TRIM34Q9BYJ4 488 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 SYCE3A1L190 88 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 CYTH3O43739 400 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 GDF11O95390 407 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 PARP1P09874 1014 aaKnown RBP24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 VEGFAP15692 232 aaPredicted RBP24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 CCDC183Q5T5S1 534 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 ANO1Q5XXA6 986 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 USP17L2Q6R6M4 530 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 OXER1Q8TDS5 423 aa24.18■■□□□ 1.46
PDXDC1-205ENST00000535621 CLIP2Q9UDT6 1046 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms