RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 GABPAQ06546 454 aa15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 TRIM32Q13049 653 aa15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 MAP3K21Q5TCX8 1036 aa15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 NCAPG2Q86XI2 1143 aa15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 DIS3LQ8TF46 1054 aaKnown RBP15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 LBHD1Q9BQE6 289 aaPredicted RBP15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 KANSL2Q9H9L4 492 aa15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 SIPA1L1O43166 1804 aa15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 USP17L12C9JPN9 530 aa15.87■□□□□ 0.13
CLSTN3-205ENST00000535452 USP17L21D6R901 530 aa15.87■□□□□ 0.13
CLSTN3-205ENST00000535452 ERC2O15083 957 aa15.87■□□□□ 0.13
CLSTN3-205ENST00000535452 ZFYP08048 801 aaPredicted RBP15.87■□□□□ 0.13
CLSTN3-205ENST00000535452 SLC3A2P08195 630 aaKnown RBP15.87■□□□□ 0.13
CLSTN3-205ENST00000535452 GNAT2P19087 354 aa15.87■□□□□ 0.13
CLSTN3-205ENST00000535452 ARRDC4Q8NCT1 418 aa15.87■□□□□ 0.13
CLSTN3-205ENST00000535452 SHCBP1Q8NEM2 672 aa15.87■□□□□ 0.13
CLSTN3-205ENST00000535452 NACAP1Q9BZK3 213 aa15.87■□□□□ 0.13
CLSTN3-205ENST00000535452 SPATC1LQ9H0A9 340 aa15.87■□□□□ 0.13
CLSTN3-205ENST00000535452 VCPKMTQ9H867 229 aa15.87■□□□□ 0.13
CLSTN3-205ENST00000535452 MYO5AQ9Y4I1 1855 aaKnown RBP15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 TCRBV5S4A2TA0A5A2 114 aa15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 KBTBD13C9JR72 458 aa15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 PEX10O60683 326 aa15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 SLC25A27O95847 323 aa15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 MYCNP04198 464 aaPredicted RBP15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 FCER1AP12319 257 aa15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 TDO2P48775 406 aa15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 GRB14Q14449 540 aa15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 CCL14Q16627 93 aa15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 SPICE1Q8N0Z3 855 aa15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 STAP2Q9UGK3 403 aa15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 DDX20Q9UHI6 824 aaKnown RBP15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 ZMYND8Q9ULU4 1186 aaPredicted RBP15.86■□□□□ 0.13
CLSTN3-205ENST00000535452 HOXC6P09630 235 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 CYP2D6P10635 497 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 AKR1B1P15121 316 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 ERCC3P19447 782 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 ADORA2AP29274 412 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 CCND3P30281 292 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 CDK8P49336 464 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 KCTD2Q14681 263 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 C12orf60Q5U649 245 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 SLC44A5Q8NCS7 719 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 USP6NLQ92738 828 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 DYNLL2Q96FJ2 89 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 UBE2OQ9C0C9 1292 aaKnown RBP15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 BTBD7Q9P203 1132 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 TMX2Q9Y320 296 aa15.85■□□□□ 0.13
CLSTN3-205ENST00000535452 MINDY4BA8MYZ0 360 aa15.84■□□□□ 0.13
CLSTN3-205ENST00000535452 PRKAB2O43741 272 aa15.84■□□□□ 0.13
CLSTN3-205ENST00000535452 DSG3P32926 999 aa15.84■□□□□ 0.13
CLSTN3-205ENST00000535452 C16orf86Q6ZW13 317 aa15.84■□□□□ 0.13
CLSTN3-205ENST00000535452 SIRT2Q8IXJ6 389 aa15.84■□□□□ 0.13
CLSTN3-205ENST00000535452 ZNF444Q8N0Y2 327 aaPredicted RBP15.84■□□□□ 0.13
CLSTN3-205ENST00000535452 ABRAQ8N0Z2 381 aa15.84■□□□□ 0.13
CLSTN3-205ENST00000535452 MOV10L1Q9BXT6 1211 aaKnown RBP15.84■□□□□ 0.13
CLSTN3-205ENST00000535452 ISY1Q9ULR0 285 aaKnown RBP15.84■□□□□ 0.13
CLSTN3-205ENST00000535452 DNM1LO00429 736 aa15.83■□□□□ 0.12
CLSTN3-205ENST00000535452 CNMDO75829 334 aa15.83■□□□□ 0.12
CLSTN3-205ENST00000535452 EEF2P13639 858 aaKnown RBP15.83■□□□□ 0.12
CLSTN3-205ENST00000535452 SYN1P17600 705 aa15.83■□□□□ 0.12
CLSTN3-205ENST00000535452 GUCY1A2P33402 732 aa15.83■□□□□ 0.12
CLSTN3-205ENST00000535452 BMP8BP34820 402 aa15.83■□□□□ 0.12
CLSTN3-205ENST00000535452 PPP4R3BQ5MIZ7 849 aa15.83■□□□□ 0.12
CLSTN3-205ENST00000535452 OLFML2BQ68BL8 750 aa15.83■□□□□ 0.12
CLSTN3-205ENST00000535452 GIMAP6Q6P9H5 292 aa15.83■□□□□ 0.12
CLSTN3-205ENST00000535452 APPBP2Q92624 585 aa15.83■□□□□ 0.12
CLSTN3-205ENST00000535452 SENP6Q9GZR1 1112 aaPredicted RBP15.83■□□□□ 0.12
CLSTN3-205ENST00000535452 DOCK3Q8IZD9 2030 aa15.82■□□□□ 0.12
CLSTN3-205ENST00000535452 A0A1W2PRG0 241 aa15.82■□□□□ 0.12
CLSTN3-205ENST00000535452 SMARCA5O60264 1052 aaPredicted RBP15.82■□□□□ 0.12
CLSTN3-205ENST00000535452 CYP2C19P33261 490 aa15.82■□□□□ 0.12
CLSTN3-205ENST00000535452 KBTBD3Q8NAB2 608 aa15.82■□□□□ 0.12
CLSTN3-205ENST00000535452 MMP19Q99542 508 aa15.82■□□□□ 0.12
CLSTN3-205ENST00000535452 RNF113AO15541 343 aaKnown RBP15.81■□□□□ 0.12
CLSTN3-205ENST00000535452 PDE4BQ07343 736 aa15.81■□□□□ 0.12
CLSTN3-205ENST00000535452 CTR9Q6PD62 1173 aa15.81■□□□□ 0.12
CLSTN3-205ENST00000535452 TDHQ8IZJ6 230 aa15.81■□□□□ 0.12
CLSTN3-205ENST00000535452 ATG4CQ96DT6 458 aa15.81■□□□□ 0.12
CLSTN3-205ENST00000535452 CNPY2Q9Y2B0 182 aa15.81■□□□□ 0.12
CLSTN3-205ENST00000535452 DDX60LQ5H9U9 1706 aaKnown RBP15.8■□□□□ 0.12
CLSTN3-205ENST00000535452 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
CLSTN3-205ENST00000535452 ZBED4O75132 1171 aa15.8■□□□□ 0.12
CLSTN3-205ENST00000535452 RARBP10826 455 aa15.8■□□□□ 0.12
CLSTN3-205ENST00000535452 STAT3P40763 770 aa15.8■□□□□ 0.12
CLSTN3-205ENST00000535452 LHX8Q68G74 356 aa15.8■□□□□ 0.12
CLSTN3-205ENST00000535452 STK11IPQ8N1F8 1099 aa15.8■□□□□ 0.12
CLSTN3-205ENST00000535452 DDX11Q96FC9 970 aa15.8■□□□□ 0.12
CLSTN3-205ENST00000535452 FSD1Q9BTV5 496 aa15.8■□□□□ 0.12
CLSTN3-205ENST00000535452 PUS7LQ9H0K6 701 aaKnown RBP15.8■□□□□ 0.12
CLSTN3-205ENST00000535452 NRBP1Q9UHY1 535 aa15.8■□□□□ 0.12
CLSTN3-205ENST00000535452 MYH8P13535 1937 aa15.8■□□□□ 0.12
CLSTN3-205ENST00000535452 CYP2D7A0A087X1C5 515 aa15.79■□□□□ 0.12
CLSTN3-205ENST00000535452 SEPT4O43236 478 aa15.79■□□□□ 0.12
CLSTN3-205ENST00000535452 MAGEA10P43363 369 aaPredicted RBP15.79■□□□□ 0.12
CLSTN3-205ENST00000535452 SLC4A3P48751 1232 aa15.79■□□□□ 0.12
CLSTN3-205ENST00000535452 SBK1Q52WX2 424 aa15.79■□□□□ 0.12
CLSTN3-205ENST00000535452 NPLOC4Q8TAT6 608 aa15.79■□□□□ 0.12
CLSTN3-205ENST00000535452 STRBPQ96SI9 672 aaKnown RBP15.79■□□□□ 0.12
CLSTN3-205ENST00000535452 SLF1Q9BQI6 1058 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms