RNA–Protein interactions for RNA: ENST00000534788.1

UPK2-202, Transcript of uroplakin 2, humanhuman

TSL 3

Gene UPK2, Length 958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2-202ENST00000534788 TTYH1Q9H313 450 aaPredicted RBP16.26■□□□□ 0.19
UPK2-202ENST00000534788 SPDYE16A6NNV3 312 aaPredicted RBP16.25■□□□□ 0.19
UPK2-202ENST00000534788 IFIT2P09913 472 aaKnown RBP16.25■□□□□ 0.19
UPK2-202ENST00000534788 SLC39A5Q6ZMH5 540 aa16.25■□□□□ 0.19
UPK2-202ENST00000534788 AACSQ86V21 672 aa16.25■□□□□ 0.19
UPK2-202ENST00000534788 MYLIPQ8WY64 445 aa16.25■□□□□ 0.19
UPK2-202ENST00000534788 KIAA1683Q9H0B3 1180 aa16.25■□□□□ 0.19
UPK2-202ENST00000534788 DBNLQ9UJU6 430 aaKnown RBP16.25■□□□□ 0.19
UPK2-202ENST00000534788 IVNS1ABPQ9Y6Y0 642 aa16.25■□□□□ 0.19
UPK2-202ENST00000534788 PRUNE2Q8WUY3 3088 aa16.24■□□□□ 0.19
UPK2-202ENST00000534788 USP14P54578 494 aa16.24■□□□□ 0.19
UPK2-202ENST00000534788 SNX17Q15036 470 aa16.24■□□□□ 0.19
UPK2-202ENST00000534788 TRIM60Q495X7 471 aa16.24■□□□□ 0.19
UPK2-202ENST00000534788 ACER1Q8TDN7 264 aa16.24■□□□□ 0.19
UPK2-202ENST00000534788 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.24■□□□□ 0.19
UPK2-202ENST00000534788 BADQ92934 168 aa16.24■□□□□ 0.19
UPK2-202ENST00000534788 LRRCC1Q9C099 1032 aa16.24■□□□□ 0.19
UPK2-202ENST00000534788 PIH1D3Q9NQM4 214 aaKnown RBP16.24■□□□□ 0.19
UPK2-202ENST00000534788 PRDM6Q9NQX0 595 aa16.24■□□□□ 0.19
UPK2-202ENST00000534788 PRDM5Q9NQX1 630 aaPredicted RBP16.24■□□□□ 0.19
UPK2-202ENST00000534788 NAV1Q8NEY1 1877 aa16.24■□□□□ 0.19
UPK2-202ENST00000534788 PARP14Q460N5 1801 aa16.24■□□□□ 0.19
UPK2-202ENST00000534788 ZAP70P43403 619 aa16.23■□□□□ 0.19
UPK2-202ENST00000534788 SMAD3P84022 425 aaKnown RBP16.23■□□□□ 0.19
UPK2-202ENST00000534788 RAB3GAP1Q15042 981 aa16.23■□□□□ 0.19
UPK2-202ENST00000534788 ANO1Q5XXA6 986 aa16.23■□□□□ 0.19
UPK2-202ENST00000534788 CERS3Q8IU89 383 aa16.23■□□□□ 0.19
UPK2-202ENST00000534788 ARRDC4Q8NCT1 418 aa16.23■□□□□ 0.19
UPK2-202ENST00000534788 CCDC8Q9H0W5 538 aaPredicted RBP16.23■□□□□ 0.19
UPK2-202ENST00000534788 DCTPP1Q9H773 170 aa16.23■□□□□ 0.19
UPK2-202ENST00000534788 PDLIM7Q9NR12 457 aa16.23■□□□□ 0.19
UPK2-202ENST00000534788 KBTBD13C9JR72 458 aa16.22■□□□□ 0.19
UPK2-202ENST00000534788 TTF1Q15361 905 aaPredicted RBP16.22■□□□□ 0.19
UPK2-202ENST00000534788 OLFML2BQ68BL8 750 aa16.22■□□□□ 0.19
UPK2-202ENST00000534788 SH3RF1Q7Z6J0 888 aa16.22■□□□□ 0.19
UPK2-202ENST00000534788 EHD4Q9H223 541 aa16.22■□□□□ 0.19
UPK2-202ENST00000534788 RPAP3Q9H6T3 665 aaPredicted RBP16.22■□□□□ 0.19
UPK2-202ENST00000534788 SERPINB13Q9UIV8 391 aa16.22■□□□□ 0.19
UPK2-202ENST00000534788 ZNFX1Q9P2E3 1918 aaKnown RBP16.21■□□□□ 0.19
UPK2-202ENST00000534788 TRIM43BA6NCK2 446 aa16.21■□□□□ 0.19
UPK2-202ENST00000534788 SEPT4O43236 478 aa16.21■□□□□ 0.19
UPK2-202ENST00000534788 CYP7A1P22680 504 aa16.21■□□□□ 0.19
UPK2-202ENST00000534788 ADORA2AP29274 412 aa16.21■□□□□ 0.19
UPK2-202ENST00000534788 GUCY1A2P33402 732 aa16.21■□□□□ 0.19
UPK2-202ENST00000534788 ABCB5Q2M3G0 1257 aa16.21■□□□□ 0.19
UPK2-202ENST00000534788 CERKLQ49MI3 558 aaPredicted RBP16.21■□□□□ 0.19
UPK2-202ENST00000534788 DPP9Q86TI2 863 aa16.21■□□□□ 0.19
UPK2-202ENST00000534788 TRIM43Q96BQ3 446 aaPredicted RBP16.21■□□□□ 0.19
UPK2-202ENST00000534788 MOV10L1Q9BXT6 1211 aaKnown RBP16.21■□□□□ 0.19
UPK2-202ENST00000534788 IL1RAPL2Q9NP60 686 aa16.21■□□□□ 0.19
UPK2-202ENST00000534788 FOSL2P15408 326 aa16.2■□□□□ 0.18
UPK2-202ENST00000534788 SHMT1P34896 483 aa16.2■□□□□ 0.18
UPK2-202ENST00000534788 C1orf53Q5VUE5 145 aa16.2■□□□□ 0.18
UPK2-202ENST00000534788 MIGA1Q8NAN2 632 aa16.2■□□□□ 0.18
UPK2-202ENST00000534788 GPATCH3Q96I76 525 aa16.2■□□□□ 0.18
UPK2-202ENST00000534788 CRBNQ96SW2 442 aa16.2■□□□□ 0.18
UPK2-202ENST00000534788 PLXNA1Q9UIW2 1896 aa16.2■□□□□ 0.18
UPK2-202ENST00000534788 COL11A1P12107 1806 aaPredicted RBP16.19■□□□□ 0.18
UPK2-202ENST00000534788 MYH8P13535 1937 aa16.19■□□□□ 0.18
UPK2-202ENST00000534788 APBB1O00213 710 aa16.19■□□□□ 0.18
UPK2-202ENST00000534788 COBLO75128 1261 aa16.19■□□□□ 0.18
UPK2-202ENST00000534788 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
UPK2-202ENST00000534788 ITGB8P26012 769 aa16.19■□□□□ 0.18
UPK2-202ENST00000534788 ADCYAP1R1P41586 468 aa16.19■□□□□ 0.18
UPK2-202ENST00000534788 USP5P45974 858 aa16.19■□□□□ 0.18
UPK2-202ENST00000534788 TLR7Q9NYK1 1049 aaKnown RBP16.19■□□□□ 0.18
UPK2-202ENST00000534788 ZBTB47Q9UFB7 747 aaPredicted RBP16.19■□□□□ 0.18
UPK2-202ENST00000534788 SMCHD1A6NHR9 2005 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 STRNO43815 780 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 ERCC3P19447 782 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 PLCD1P51178 756 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 EPHB4P54760 987 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 MAP3K12Q12852 859 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 HDAC1Q13547 482 aaPredicted RBP16.18■□□□□ 0.18
UPK2-202ENST00000534788 LRRC41Q15345 812 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 FAM47AQ5JRC9 791 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 PRAMEF19Q5SWL8 479 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 TTC6Q86TZ1 520 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 SHCBP1Q8NEM2 672 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 FERMT2Q96AC1 680 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 SPATC1LQ9H0A9 340 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 CABP5Q9NP86 173 aa16.18■□□□□ 0.18
UPK2-202ENST00000534788 TMEM265A0A087WTH1 108 aa16.17■□□□□ 0.18
UPK2-202ENST00000534788 A0A1W2PRG0 241 aa16.17■□□□□ 0.18
UPK2-202ENST00000534788 IDH1O75874 414 aaKnown RBP16.17■□□□□ 0.18
UPK2-202ENST00000534788 ATP5JP18859 108 aa16.17■□□□□ 0.18
UPK2-202ENST00000534788 TLE2Q04725 743 aa16.17■□□□□ 0.18
UPK2-202ENST00000534788 COG2Q14746 738 aa16.17■□□□□ 0.18
UPK2-202ENST00000534788 SEPT2Q15019 361 aa16.17■□□□□ 0.18
UPK2-202ENST00000534788 MAGEB6Q8N7X4 407 aa16.17■□□□□ 0.18
UPK2-202ENST00000534788 SYMPKQ92797 1274 aaKnown RBP16.17■□□□□ 0.18
UPK2-202ENST00000534788 PCDHB15Q9Y5E8 787 aa16.17■□□□□ 0.18
UPK2-202ENST00000534788 GABPAQ06546 454 aa16.16■□□□□ 0.18
UPK2-202ENST00000534788 USP38Q8NB14 1042 aa16.16■□□□□ 0.18
UPK2-202ENST00000534788 MAML3Q96JK9 1138 aa16.16■□□□□ 0.18
UPK2-202ENST00000534788 RNPC3Q96LT9 517 aaKnown RBP16.16■□□□□ 0.18
UPK2-202ENST00000534788 HOXC10Q9NYD6 342 aa16.16■□□□□ 0.18
UPK2-202ENST00000534788 CLTBP09497 229 aa16.15■□□□□ 0.18
UPK2-202ENST00000534788 EVX2Q03828 476 aa16.15■□□□□ 0.18
UPK2-202ENST00000534788 KIAA1755Q5JYT7 1200 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms