RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 PPFIBP1Q86W92 1011 aa10□□□□□ -0.81
CASP4-213ENST00000534356 ARMC5Q96C12 935 aa10□□□□□ -0.81
CASP4-213ENST00000534356 FBXL18Q96ME1 805 aa10□□□□□ -0.81
CASP4-213ENST00000534356 ASPNQ9BXN1 380 aa10□□□□□ -0.81
CASP4-213ENST00000534356 PCDHB10Q9UN67 800 aa10□□□□□ -0.81
CASP4-213ENST00000534356 CAPN6Q9Y6Q1 641 aa10□□□□□ -0.81
CASP4-213ENST00000534356 C9IYK1 514 aa9.99□□□□□ -0.81
CASP4-213ENST00000534356 KLF4O43474 513 aa9.99□□□□□ -0.81
CASP4-213ENST00000534356 KIR3DL1P43629 444 aa9.99□□□□□ -0.81
CASP4-213ENST00000534356 PMS1P54277 932 aaKnown RBP9.99□□□□□ -0.81
CASP4-213ENST00000534356 NKPD1Q17RQ9 610 aa9.99□□□□□ -0.81
CASP4-213ENST00000534356 TDRD10Q5VZ19 366 aaKnown RBP9.99□□□□□ -0.81
CASP4-213ENST00000534356 PLD6Q8N2A8 252 aaKnown RBP9.99□□□□□ -0.81
CASP4-213ENST00000534356 MFSD4AQ8N468 514 aa9.99□□□□□ -0.81
CASP4-213ENST00000534356 ZNF214Q9UL59 606 aaPredicted RBP9.99□□□□□ -0.81
CASP4-213ENST00000534356 CEACAM5P06731 702 aa9.98□□□□□ -0.81
CASP4-213ENST00000534356 RNF4P78317 190 aa9.98□□□□□ -0.81
CASP4-213ENST00000534356 TNK2Q07912 1038 aa9.98□□□□□ -0.81
CASP4-213ENST00000534356 RBL2Q08999 1139 aa9.98□□□□□ -0.81
CASP4-213ENST00000534356 PHAXQ9H814 394 aaKnown RBP9.98□□□□□ -0.81
CASP4-213ENST00000534356 FAM86C1Q9NVL1 165 aa9.98□□□□□ -0.81
CASP4-213ENST00000534356 MED26O95402 600 aa9.97□□□□□ -0.81
CASP4-213ENST00000534356 TP53P04637 393 aaPredicted RBP9.97□□□□□ -0.81
CASP4-213ENST00000534356 LARP1BQ659C4 914 aaKnown RBP9.97□□□□□ -0.81
CASP4-213ENST00000534356 SPACA3Q8IXA5 215 aa9.97□□□□□ -0.81
CASP4-213ENST00000534356 CKAP2LQ8IYA6 745 aa9.97□□□□□ -0.81
CASP4-213ENST00000534356 DTWD2Q8NBA8 298 aa9.97□□□□□ -0.81
CASP4-213ENST00000534356 NETO1Q8TDF5 533 aa9.97□□□□□ -0.81
CASP4-213ENST00000534356 R3HCC1Q9Y3T6 440 aaKnown RBP9.97□□□□□ -0.81
CASP4-213ENST00000534356 FAM155AB1AL88 458 aaPredicted RBP9.96□□□□□ -0.82
CASP4-213ENST00000534356 COBLO75128 1261 aa9.96□□□□□ -0.82
CASP4-213ENST00000534356 GRIK1P39086 918 aa9.96□□□□□ -0.82
CASP4-213ENST00000534356 MSMPQ1L6U9 139 aa9.96□□□□□ -0.82
CASP4-213ENST00000534356 GNPTABQ3T906 1256 aa9.96□□□□□ -0.82
CASP4-213ENST00000534356 CELF2-AS1Q8N7Q2 184 aa9.96□□□□□ -0.82
CASP4-213ENST00000534356 MICAL1Q8TDZ2 1067 aa9.96□□□□□ -0.82
CASP4-213ENST00000534356 KLHL6Q8WZ60 621 aa9.96□□□□□ -0.82
CASP4-213ENST00000534356 DNAJC2Q99543 621 aaKnown RBP9.96□□□□□ -0.82
CASP4-213ENST00000534356 HIRIP3Q9BW71 556 aaPredicted RBP9.96□□□□□ -0.82
CASP4-213ENST00000534356 MKRN2Q9H000 416 aaKnown RBP9.96□□□□□ -0.82
CASP4-213ENST00000534356 SSTR4P31391 388 aa9.95□□□□□ -0.82
CASP4-213ENST00000534356 SLC7A5Q01650 507 aa9.95□□□□□ -0.82
CASP4-213ENST00000534356 IFI16Q16666 785 aaKnown RBP9.95□□□□□ -0.82
CASP4-213ENST00000534356 NBPF9Q3BBW0 867 aa9.95□□□□□ -0.82
CASP4-213ENST00000534356 AXDND1Q5T1B0 1012 aaPredicted RBP9.95□□□□□ -0.82
CASP4-213ENST00000534356 INTS5Q6P9B9 1019 aaKnown RBP9.95□□□□□ -0.82
CASP4-213ENST00000534356 VHLLQ6RSH7 139 aa9.95□□□□□ -0.82
CASP4-213ENST00000534356 CCDC144CPQ8IYA2 1237 aa9.95□□□□□ -0.82
CASP4-213ENST00000534356 KCNH3Q9ULD8 1083 aa9.95□□□□□ -0.82
CASP4-213ENST00000534356 RAB33AQ14088 237 aa9.94□□□□□ -0.82
CASP4-213ENST00000534356 BBS9Q3SYG4 887 aa9.94□□□□□ -0.82
CASP4-213ENST00000534356 CDKAL1Q5VV42 579 aa9.94□□□□□ -0.82
CASP4-213ENST00000534356 C6orf15Q6UXA7 325 aaPredicted RBP9.94□□□□□ -0.82
CASP4-213ENST00000534356 PIWIL2Q8TC59 973 aaKnown RBP9.94□□□□□ -0.82
CASP4-213ENST00000534356 UBXN4Q92575 508 aa9.94□□□□□ -0.82
CASP4-213ENST00000534356 USP35Q9P2H5 1018 aa9.94□□□□□ -0.82
CASP4-213ENST00000534356 ST14Q9Y5Y6 855 aa9.94□□□□□ -0.82
CASP4-213ENST00000534356 B2RBV5 119 aa9.93□□□□□ -0.82
CASP4-213ENST00000534356 SNW1Q13573 536 aaKnown RBP9.93□□□□□ -0.82
CASP4-213ENST00000534356 FXNQ16595 210 aa9.93□□□□□ -0.82
CASP4-213ENST00000534356 DCAF15Q66K64 600 aa9.93□□□□□ -0.82
CASP4-213ENST00000534356 KIAA1211LQ6NV74 962 aa9.93□□□□□ -0.82
CASP4-213ENST00000534356 HSPA12BQ96MM6 686 aa9.93□□□□□ -0.82
CASP4-213ENST00000534356 ST7Q9NRC1 585 aa9.93□□□□□ -0.82
CASP4-213ENST00000534356 TMEM265A0A087WTH1 108 aa9.92□□□□□ -0.82
CASP4-213ENST00000534356 SHOXO15266 292 aa9.92□□□□□ -0.82
CASP4-213ENST00000534356 CD97P48960 835 aa9.92□□□□□ -0.82
CASP4-213ENST00000534356 AUHQ13825 339 aaKnown RBP9.92□□□□□ -0.82
CASP4-213ENST00000534356 FAM178BQ8IXR5 827 aa9.92□□□□□ -0.82
CASP4-213ENST00000534356 C7orf61Q8IZ16 206 aa9.92□□□□□ -0.82
CASP4-213ENST00000534356 PMFBP1Q8TBY8 1022 aa9.92□□□□□ -0.82
CASP4-213ENST00000534356 SMARCC1Q92922 1105 aaPredicted RBP9.92□□□□□ -0.82
CASP4-213ENST00000534356 TRIM55Q9BYV6 548 aa9.92□□□□□ -0.82
CASP4-213ENST00000534356 PRDM14Q9GZV8 571 aa9.92□□□□□ -0.82
CASP4-213ENST00000534356 SHISA3A0PJX4 238 aa9.91□□□□□ -0.82
CASP4-213ENST00000534356 H3BS24 57 aa9.91□□□□□ -0.82
CASP4-213ENST00000534356 DDAH1O94760 285 aa9.91□□□□□ -0.82
CASP4-213ENST00000534356 CLCN7P51798 805 aa9.91□□□□□ -0.82
CASP4-213ENST00000534356 DDR2Q16832 855 aa9.91□□□□□ -0.82
CASP4-213ENST00000534356 TMC3Q7Z5M5 1100 aa9.91□□□□□ -0.82
CASP4-213ENST00000534356 DUSP15Q9H1R2 295 aaPredicted RBP9.91□□□□□ -0.82
CASP4-213ENST00000534356 FBXL21Q9UKT6 434 aa9.91□□□□□ -0.82
CASP4-213ENST00000534356 SNX11Q9Y5W9 270 aa9.91□□□□□ -0.82
CASP4-213ENST00000534356 WASH4PA8MWX3 477 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 CBFA2T2O43439 604 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 GJB6O95452 261 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 SRFP11831 508 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 NCAPHQ15003 741 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 ANKRD39Q53RE8 183 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 ZMYM1Q5SVZ6 1142 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 NBPF6Q5VWK0 638 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 NBPF4Q96M43 638 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 GPR62Q9BZJ7 368 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 SEMA3GQ9NS98 782 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 BSDC1Q9NW68 430 aaPredicted RBP9.9□□□□□ -0.82
CASP4-213ENST00000534356 ZNF451Q9Y4E5 1061 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 PCDHB12Q9Y5F1 795 aa9.9□□□□□ -0.82
CASP4-213ENST00000534356 SPINK2P20155 84 aa9.89□□□□□ -0.83
CASP4-213ENST00000534356 BNIP3Q12983 259 aa9.89□□□□□ -0.83
CASP4-213ENST00000534356 NMIQ13287 307 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms