RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 AMOTL1Q8IY63 956 aa16.86■□□□□ 0.29
SF3B2-215ENST00000534307 RPAP3Q9H6T3 665 aaPredicted RBP16.86■□□□□ 0.29
SF3B2-215ENST00000534307 A0A0G2JMZ2 1700 aa16.86■□□□□ 0.29
SF3B2-215ENST00000534307 INHAP05111 366 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 GJB1P08034 283 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 GNAT2P19087 354 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 UBXN2AP68543 259 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 ICA1Q05084 483 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 LRRFIP1Q32MZ4 808 aaKnown RBP16.85■□□□□ 0.29
SF3B2-215ENST00000534307 ZMYM1Q5SVZ6 1142 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 SMC5Q8IY18 1101 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 LRCH3Q96II8 777 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 SEC62Q99442 399 aaKnown RBP16.85■□□□□ 0.29
SF3B2-215ENST00000534307 HTATIP2Q9BUP3 242 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.85■□□□□ 0.29
SF3B2-215ENST00000534307 UNC93B1Q9H1C4 597 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 PORCNQ9H237 461 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 TMX2Q9Y320 296 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 RABGAP1Q9Y3P9 1069 aa16.85■□□□□ 0.29
SF3B2-215ENST00000534307 PARP14Q460N5 1801 aa16.84■□□□□ 0.29
SF3B2-215ENST00000534307 SPDYE16A6NNV3 312 aaPredicted RBP16.84■□□□□ 0.29
SF3B2-215ENST00000534307 MAPK4P31152 587 aa16.84■□□□□ 0.29
SF3B2-215ENST00000534307 PDE1AP54750 535 aa16.84■□□□□ 0.29
SF3B2-215ENST00000534307 NKX2-3Q8TAU0 364 aa16.84■□□□□ 0.29
SF3B2-215ENST00000534307 USP6NLQ92738 828 aa16.84■□□□□ 0.29
SF3B2-215ENST00000534307 PAGR1Q9BTK6 254 aa16.84■□□□□ 0.29
SF3B2-215ENST00000534307 FSD1Q9BTV5 496 aa16.84■□□□□ 0.29
SF3B2-215ENST00000534307 RNF208Q9H0X6 261 aa16.84■□□□□ 0.29
SF3B2-215ENST00000534307 BIN2Q9UBW5 565 aaPredicted RBP16.84■□□□□ 0.29
SF3B2-215ENST00000534307 PRUNE2Q8WUY3 3088 aa16.83■□□□□ 0.29
SF3B2-215ENST00000534307 A0A1W2PPC1 479 aa16.83■□□□□ 0.28
SF3B2-215ENST00000534307 EXOC6Q8TAG9 804 aa16.83■□□□□ 0.28
SF3B2-215ENST00000534307 SOCS4Q8WXH5 440 aa16.83■□□□□ 0.28
SF3B2-215ENST00000534307 LPAR1Q92633 364 aa16.83■□□□□ 0.28
SF3B2-215ENST00000534307 VCPKMTQ9H867 229 aa16.83■□□□□ 0.28
SF3B2-215ENST00000534307 ARHGEF10LQ9HCE6 1279 aa16.83■□□□□ 0.28
SF3B2-215ENST00000534307 PAK6Q9NQU5 681 aaPredicted RBP16.83■□□□□ 0.28
SF3B2-215ENST00000534307 BTBD7Q9P203 1132 aa16.83■□□□□ 0.28
SF3B2-215ENST00000534307 PATL2C9JE40 543 aaKnown RBP16.82■□□□□ 0.28
SF3B2-215ENST00000534307 FOXP2O15409 715 aa16.82■□□□□ 0.28
SF3B2-215ENST00000534307 IGHDP01880 384 aa16.82■□□□□ 0.28
SF3B2-215ENST00000534307 HMGCRP04035 888 aa16.82■□□□□ 0.28
SF3B2-215ENST00000534307 XRCC5P13010 732 aaKnown RBP16.82■□□□□ 0.28
SF3B2-215ENST00000534307 RASA1P20936 1047 aa16.82■□□□□ 0.28
SF3B2-215ENST00000534307 MNX1P50219 401 aaPredicted RBP16.82■□□□□ 0.28
SF3B2-215ENST00000534307 MORN1Q5T089 497 aa16.82■□□□□ 0.28
SF3B2-215ENST00000534307 GPR142Q7Z601 462 aa16.82■□□□□ 0.28
SF3B2-215ENST00000534307 IFNL3Q8IZI9 196 aa16.82■□□□□ 0.28
SF3B2-215ENST00000534307 KANSL2Q9H9L4 492 aa16.82■□□□□ 0.28
SF3B2-215ENST00000534307 NR2E3Q9Y5X4 410 aa16.82■□□□□ 0.28
SF3B2-215ENST00000534307 DNAH12Q6ZR08 3092 aa16.82■□□□□ 0.28
SF3B2-215ENST00000534307 FARP2O94887 1054 aaPredicted RBP16.81■□□□□ 0.28
SF3B2-215ENST00000534307 EEF2P13639 858 aaKnown RBP16.81■□□□□ 0.28
SF3B2-215ENST00000534307 COG2Q14746 738 aa16.81■□□□□ 0.28
SF3B2-215ENST00000534307 U2AF1L4Q8WU68 220 aaKnown RBP16.81■□□□□ 0.28
SF3B2-215ENST00000534307 TRIB2Q92519 343 aa16.81■□□□□ 0.28
SF3B2-215ENST00000534307 EVI5LQ96CN4 794 aa16.81■□□□□ 0.28
SF3B2-215ENST00000534307 RWDD1Q9H446 243 aaPredicted RBP16.81■□□□□ 0.28
SF3B2-215ENST00000534307 SH2D4AQ9H788 454 aa16.81■□□□□ 0.28
SF3B2-215ENST00000534307 ZBTB47Q9UFB7 747 aaPredicted RBP16.81■□□□□ 0.28
SF3B2-215ENST00000534307 IGKV6D-41A0A0C4DH26 115 aa16.8■□□□□ 0.28
SF3B2-215ENST00000534307 MINDY4BA8MYZ0 360 aa16.8■□□□□ 0.28
SF3B2-215ENST00000534307 SGPL1O95470 568 aa16.8■□□□□ 0.28
SF3B2-215ENST00000534307 TDO2P48775 406 aa16.8■□□□□ 0.28
SF3B2-215ENST00000534307 TRIM32Q13049 653 aa16.8■□□□□ 0.28
SF3B2-215ENST00000534307 MAP3K21Q5TCX8 1036 aa16.8■□□□□ 0.28
SF3B2-215ENST00000534307 PLEKHH3Q7Z736 793 aa16.8■□□□□ 0.28
SF3B2-215ENST00000534307 SPICE1Q8N0Z3 855 aa16.8■□□□□ 0.28
SF3B2-215ENST00000534307 NUDT12Q9BQG2 462 aa16.8■□□□□ 0.28
SF3B2-215ENST00000534307 TANGO6Q9C0B7 1094 aa16.8■□□□□ 0.28
SF3B2-215ENST00000534307 LNPKQ9C0E8 428 aa16.8■□□□□ 0.28
SF3B2-215ENST00000534307 WDR46O15213 610 aaKnown RBP16.79■□□□□ 0.28
SF3B2-215ENST00000534307 APPP05067 770 aa16.79■□□□□ 0.28
SF3B2-215ENST00000534307 CYP2B6P20813 491 aa16.79■□□□□ 0.28
SF3B2-215ENST00000534307 CCNA1P78396 465 aa16.79■□□□□ 0.28
SF3B2-215ENST00000534307 TICAM2Q86XR7 235 aa16.79■□□□□ 0.28
SF3B2-215ENST00000534307 CRISPLD2Q9H0B8 497 aa16.79■□□□□ 0.28
SF3B2-215ENST00000534307 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.79■□□□□ 0.28
SF3B2-215ENST00000534307 HOXC10Q9NYD6 342 aa16.79■□□□□ 0.28
SF3B2-215ENST00000534307 ZNF236Q9UL36 1845 aa16.79■□□□□ 0.28
SF3B2-215ENST00000534307 PLIN4Q96Q06 1357 aa16.78■□□□□ 0.28
SF3B2-215ENST00000534307 CDH23Q9H251 3354 aa16.78■□□□□ 0.28
SF3B2-215ENST00000534307 DSG3P32926 999 aa16.78■□□□□ 0.28
SF3B2-215ENST00000534307 NUCB1Q02818 461 aa16.78■□□□□ 0.28
SF3B2-215ENST00000534307 CCDC129Q6ZRS4 1044 aa16.78■□□□□ 0.28
SF3B2-215ENST00000534307 STK11IPQ8N1F8 1099 aa16.78■□□□□ 0.28
SF3B2-215ENST00000534307 DEFB118Q96PH6 123 aa16.78■□□□□ 0.28
SF3B2-215ENST00000534307 APBA2Q99767 749 aa16.78■□□□□ 0.28
SF3B2-215ENST00000534307 NACAP1Q9BZK3 213 aa16.78■□□□□ 0.28
SF3B2-215ENST00000534307 MKNK2Q9HBH9 465 aa16.78■□□□□ 0.28
SF3B2-215ENST00000534307 NYAP2Q9P242 653 aa16.78■□□□□ 0.28
SF3B2-215ENST00000534307 SUPT16HQ9Y5B9 1047 aaKnown RBP16.78■□□□□ 0.28
SF3B2-215ENST00000534307 FLOT1O75955 427 aa16.77■□□□□ 0.28
SF3B2-215ENST00000534307 RGS2P41220 211 aa16.77■□□□□ 0.28
SF3B2-215ENST00000534307 MAP2K5Q13163 448 aa16.77■□□□□ 0.28
SF3B2-215ENST00000534307 GRB14Q14449 540 aa16.77■□□□□ 0.28
SF3B2-215ENST00000534307 CHD1LQ86WJ1 897 aa16.77■□□□□ 0.28
SF3B2-215ENST00000534307 CCAR1Q8IX12 1150 aaKnown RBP16.77■□□□□ 0.28
SF3B2-215ENST00000534307 TRMT44Q8IYL2 757 aaKnown RBP16.77■□□□□ 0.28
SF3B2-215ENST00000534307 MB21D1Q8N884 522 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms