RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 SWAP70Q9UH65 585 aa20.38■□□□□ 0.85
CAPRIN1-216ENST00000534042 SZT2Q5T011 3432 aa20.37■□□□□ 0.85
CAPRIN1-216ENST00000534042 BAZ2AQ9UIF9 1905 aaKnown RBP20.37■□□□□ 0.85
CAPRIN1-216ENST00000534042 SLC44A5Q8NCS7 719 aa20.37■□□□□ 0.85
CAPRIN1-216ENST00000534042 NPLOC4Q8TAT6 608 aa20.37■□□□□ 0.85
CAPRIN1-216ENST00000534042 BOLA2Q9H3K6 86 aa20.37■□□□□ 0.85
CAPRIN1-216ENST00000534042 CHMP4BQ9H444 224 aaKnown RBP20.37■□□□□ 0.85
CAPRIN1-216ENST00000534042 FRMPD3Q5JV73 1810 aa20.37■□□□□ 0.85
CAPRIN1-216ENST00000534042 MSCO60682 206 aa20.36■□□□□ 0.85
CAPRIN1-216ENST00000534042 CNGA1P29973 690 aa20.36■□□□□ 0.85
CAPRIN1-216ENST00000534042 LRRC26Q2I0M4 334 aa20.36■□□□□ 0.85
CAPRIN1-216ENST00000534042 DYNLL2Q96FJ2 89 aa20.36■□□□□ 0.85
CAPRIN1-216ENST00000534042 MOV10L1Q9BXT6 1211 aaKnown RBP20.36■□□□□ 0.85
CAPRIN1-216ENST00000534042 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.36■□□□□ 0.855e-14■□□□□ 9
CAPRIN1-216ENST00000534042 ATP8A2Q9NTI2 1148 aa20.36■□□□□ 0.85
CAPRIN1-216ENST00000534042 DDX20Q9UHI6 824 aaKnown RBP20.36■□□□□ 0.85
CAPRIN1-216ENST00000534042 PRKAB2O43741 272 aa20.35■□□□□ 0.85
CAPRIN1-216ENST00000534042 STRNO43815 780 aa20.35■□□□□ 0.85
CAPRIN1-216ENST00000534042 MBD4O95243 580 aa20.35■□□□□ 0.85
CAPRIN1-216ENST00000534042 ATP5JP18859 108 aa20.35■□□□□ 0.85
CAPRIN1-216ENST00000534042 CYP2C19P33261 490 aa20.35■□□□□ 0.85
CAPRIN1-216ENST00000534042 ADD2P35612 726 aa20.35■□□□□ 0.85
CAPRIN1-216ENST00000534042 DPP9Q86TI2 863 aa20.35■□□□□ 0.85
CAPRIN1-216ENST00000534042 UBE2OQ9C0C9 1292 aaKnown RBP20.35■□□□□ 0.85
CAPRIN1-216ENST00000534042 ARHGEF10LQ9HCE6 1279 aa20.35■□□□□ 0.85
CAPRIN1-216ENST00000534042 RLFQ13129 1914 aa20.35■□□□□ 0.85
CAPRIN1-216ENST00000534042 SLFNL1Q499Z3 407 aa20.34■□□□□ 0.85
CAPRIN1-216ENST00000534042 AMOTL1Q8IY63 956 aa20.34■□□□□ 0.85
CAPRIN1-216ENST00000534042 TDHQ8IZJ6 230 aa20.34■□□□□ 0.85
CAPRIN1-216ENST00000534042 MB21D1Q8N884 522 aa20.34■□□□□ 0.85
CAPRIN1-216ENST00000534042 SHCBP1Q8NEM2 672 aa20.34■□□□□ 0.85
CAPRIN1-216ENST00000534042 LPAR1Q92633 364 aa20.34■□□□□ 0.85
CAPRIN1-216ENST00000534042 CCDC17Q96LX7 622 aa20.34■□□□□ 0.85
CAPRIN1-216ENST00000534042 SENP6Q9GZR1 1112 aaPredicted RBP20.34■□□□□ 0.85
CAPRIN1-216ENST00000534042 SPATC1LQ9H0A9 340 aa20.34■□□□□ 0.85
CAPRIN1-216ENST00000534042 MYH7P12883 1935 aa20.33■□□□□ 0.85
CAPRIN1-216ENST00000534042 AKR1B1P15121 316 aa20.33■□□□□ 0.85
CAPRIN1-216ENST00000534042 ADORA2AP29274 412 aa20.33■□□□□ 0.85
CAPRIN1-216ENST00000534042 DSG3P32926 999 aa20.33■□□□□ 0.85
CAPRIN1-216ENST00000534042 ICA1Q05084 483 aa20.33■□□□□ 0.85
CAPRIN1-216ENST00000534042 KIAA1755Q5JYT7 1200 aa20.33■□□□□ 0.85
CAPRIN1-216ENST00000534042 GPR153Q6NV75 609 aa20.33■□□□□ 0.85
CAPRIN1-216ENST00000534042 DDRGK1Q96HY6 314 aa20.33■□□□□ 0.85
CAPRIN1-216ENST00000534042 HAUS7Q99871 368 aa20.33■□□□□ 0.85
CAPRIN1-216ENST00000534042 SH2D4AQ9H788 454 aa20.33■□□□□ 0.85
CAPRIN1-216ENST00000534042 TMX2Q9Y320 296 aa20.33■□□□□ 0.85
CAPRIN1-216ENST00000534042 ZNFX1Q9P2E3 1918 aaKnown RBP20.32■□□□□ 0.84
CAPRIN1-216ENST00000534042 FLOT1O75955 427 aa20.32■□□□□ 0.84
CAPRIN1-216ENST00000534042 ERCC3P19447 782 aa20.32■□□□□ 0.84
CAPRIN1-216ENST00000534042 CDK8P49336 464 aa20.32■□□□□ 0.84
CAPRIN1-216ENST00000534042 PLS1Q14651 629 aa20.32■□□□□ 0.84
CAPRIN1-216ENST00000534042 LRIT3Q3SXY7 679 aa20.32■□□□□ 0.84
CAPRIN1-216ENST00000534042 C12orf60Q5U649 245 aa20.32■□□□□ 0.84
CAPRIN1-216ENST00000534042 OLFML2BQ68BL8 750 aa20.32■□□□□ 0.84
CAPRIN1-216ENST00000534042 CLEC10AQ8IUN9 316 aa20.32■□□□□ 0.84
CAPRIN1-216ENST00000534042 SIAH1Q8IUQ4 282 aa20.32■□□□□ 0.84
CAPRIN1-216ENST00000534042 SPICE1Q8N0Z3 855 aa20.32■□□□□ 0.84
CAPRIN1-216ENST00000534042 SLC5A4Q9NY91 659 aa20.32■□□□□ 0.84
CAPRIN1-216ENST00000534042 CYP2D7A0A087X1C5 515 aa20.31■□□□□ 0.84
CAPRIN1-216ENST00000534042 USP17L12C9JPN9 530 aa20.31■□□□□ 0.84
CAPRIN1-216ENST00000534042 USP17L21D6R901 530 aa20.31■□□□□ 0.84
CAPRIN1-216ENST00000534042 CYBAP13498 195 aa20.31■□□□□ 0.84
CAPRIN1-216ENST00000534042 UBE3CQ15386 1083 aa20.31■□□□□ 0.84
CAPRIN1-216ENST00000534042 SAMD1Q6SPF0 538 aaPredicted RBP20.31■□□□□ 0.84
CAPRIN1-216ENST00000534042 TRPV1Q8NER1 839 aa20.31■□□□□ 0.84
CAPRIN1-216ENST00000534042 MROH8Q9H579 483 aa20.31■□□□□ 0.84
CAPRIN1-216ENST00000534042 VCPKMTQ9H867 229 aa20.31■□□□□ 0.84
CAPRIN1-216ENST00000534042 ZNF236Q9UL36 1845 aa20.31■□□□□ 0.84
CAPRIN1-216ENST00000534042 DNM1LO00429 736 aa20.3■□□□□ 0.84
CAPRIN1-216ENST00000534042 IGHA2P01877 340 aa20.3■□□□□ 0.84
CAPRIN1-216ENST00000534042 MDM2Q00987 491 aaPredicted RBP20.3■□□□□ 0.84
CAPRIN1-216ENST00000534042 NCAPG2Q86XI2 1143 aa20.3■□□□□ 0.84
CAPRIN1-216ENST00000534042 SLC17A8Q8NDX2 589 aa20.3■□□□□ 0.84
CAPRIN1-216ENST00000534042 ATG4CQ96DT6 458 aa20.3■□□□□ 0.84
CAPRIN1-216ENST00000534042 A0A0G2JMZ2 1700 aa20.3■□□□□ 0.84
CAPRIN1-216ENST00000534042 WDR46O15213 610 aaKnown RBP20.29■□□□□ 0.84
CAPRIN1-216ENST00000534042 COBLO75128 1261 aa20.29■□□□□ 0.84
CAPRIN1-216ENST00000534042 ATN1P54259 1190 aaPredicted RBP20.29■□□□□ 0.84
CAPRIN1-216ENST00000534042 ZSCAN25Q6NSZ9 544 aa20.29■□□□□ 0.84
CAPRIN1-216ENST00000534042 C16orf86Q6ZW13 317 aa20.29■□□□□ 0.84
CAPRIN1-216ENST00000534042 DEFB123Q8N688 67 aa20.29■□□□□ 0.84
CAPRIN1-216ENST00000534042 ARRDC4Q8NCT1 418 aa20.29■□□□□ 0.84
CAPRIN1-216ENST00000534042 LRRCC1Q9C099 1032 aa20.29■□□□□ 0.84
CAPRIN1-216ENST00000534042 RCAN3Q9UKA8 241 aa20.29■□□□□ 0.84
CAPRIN1-216ENST00000534042 SLC4A4Q9Y6R1 1079 aa20.29■□□□□ 0.84
CAPRIN1-216ENST00000534042 SMCHD1A6NHR9 2005 aa20.28■□□□□ 0.84
CAPRIN1-216ENST00000534042 SMIM22K7EJ46 135 aa20.28■□□□□ 0.84
CAPRIN1-216ENST00000534042 CHGBP05060 677 aa20.28■□□□□ 0.84
CAPRIN1-216ENST00000534042 ABRAQ8N0Z2 381 aa20.28■□□□□ 0.84
CAPRIN1-216ENST00000534042 LBHD1Q9BQE6 289 aaPredicted RBP20.28■□□□□ 0.84
CAPRIN1-216ENST00000534042 KANSL2Q9H9L4 492 aa20.28■□□□□ 0.84
CAPRIN1-216ENST00000534042 PARP14Q460N5 1801 aa20.27■□□□□ 0.84
CAPRIN1-216ENST00000534042 EEF2P13639 858 aaKnown RBP20.27■□□□□ 0.84
CAPRIN1-216ENST00000534042 GJC2Q5T442 439 aaPredicted RBP20.27■□□□□ 0.84
CAPRIN1-216ENST00000534042 LAMA3Q16787 3333 aa20.27■□□□□ 0.83
CAPRIN1-216ENST00000534042 COL11A1P12107 1806 aaPredicted RBP20.26■□□□□ 0.83
CAPRIN1-216ENST00000534042 KBTBD13C9JR72 458 aa20.26■□□□□ 0.83
CAPRIN1-216ENST00000534042 SEPT4O43236 478 aa20.26■□□□□ 0.83
CAPRIN1-216ENST00000534042 SLC25A27O95847 323 aa20.26■□□□□ 0.83
CAPRIN1-216ENST00000534042 FCER1AP12319 257 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms