RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 VCPKMTQ9H867 229 aa12.98□□□□□ -0.33
SDHD-208ENST00000534010 BTBD7Q9P203 1132 aa12.98□□□□□ -0.33
SDHD-208ENST00000534010 FGRP09769 529 aa12.97□□□□□ -0.33
SDHD-208ENST00000534010 CAPN2P17655 700 aa12.97□□□□□ -0.33
SDHD-208ENST00000534010 NOVP48745 357 aa12.97□□□□□ -0.33
SDHD-208ENST00000534010 LRRFIP1Q32MZ4 808 aaKnown RBP12.97□□□□□ -0.33
SDHD-208ENST00000534010 IFNL3Q8IZI9 196 aa12.97□□□□□ -0.33
SDHD-208ENST00000534010 GPRC5AQ8NFJ5 357 aa12.97□□□□□ -0.33
SDHD-208ENST00000534010 COA7Q96BR5 231 aa12.97□□□□□ -0.33
SDHD-208ENST00000534010 EVI5LQ96CN4 794 aa12.97□□□□□ -0.33
SDHD-208ENST00000534010 CRISPLD2Q9H0B8 497 aa12.97□□□□□ -0.33
SDHD-208ENST00000534010 LAMA3Q16787 3333 aa12.97□□□□□ -0.33
SDHD-208ENST00000534010 LAMA4Q16363 1823 aa12.97□□□□□ -0.33
SDHD-208ENST00000534010 SZT2Q5T011 3432 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 ZMYM6O95789 1325 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 HOXC6P09630 235 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 CCL5P13501 91 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 ELNP15502 786 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 MAPK4P31152 587 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 ICA1Q05084 483 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 ALX1Q15699 326 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 PLEKHM2Q8IWE5 1019 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 MKL1Q969V6 931 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 RPAP3Q9H6T3 665 aaPredicted RBP12.96□□□□□ -0.33
SDHD-208ENST00000534010 KANSL2Q9H9L4 492 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 NYAP2Q9P242 653 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 ANAPC4Q9UJX5 808 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 SYNPO2Q9UMS6 1093 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.96□□□□□ -0.33
SDHD-208ENST00000534010 TACC3Q9Y6A5 838 aa12.96□□□□□ -0.33
SDHD-208ENST00000534010 WDR46O15213 610 aaKnown RBP12.95□□□□□ -0.34
SDHD-208ENST00000534010 INHAP05111 366 aa12.95□□□□□ -0.34
SDHD-208ENST00000534010 EEF2P13639 858 aaKnown RBP12.95□□□□□ -0.34
SDHD-208ENST00000534010 DSG3P32926 999 aa12.95□□□□□ -0.34
SDHD-208ENST00000534010 COG2Q14746 738 aa12.95□□□□□ -0.34
SDHD-208ENST00000534010 ZYXQ15942 572 aaKnown RBP12.95□□□□□ -0.34
SDHD-208ENST00000534010 GPR142Q7Z601 462 aa12.95□□□□□ -0.34
SDHD-208ENST00000534010 CHD1LQ86WJ1 897 aa12.95□□□□□ -0.34
SDHD-208ENST00000534010 REPS2Q8NFH8 660 aa12.95□□□□□ -0.34
SDHD-208ENST00000534010 TRIB2Q92519 343 aa12.95□□□□□ -0.34
SDHD-208ENST00000534010 FEZ1Q99689 392 aa12.95□□□□□ -0.34
SDHD-208ENST00000534010 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
SDHD-208ENST00000534010 UNC93B1Q9H1C4 597 aa12.95□□□□□ -0.34
SDHD-208ENST00000534010 RWDD1Q9H446 243 aaPredicted RBP12.95□□□□□ -0.34
SDHD-208ENST00000534010 ECM2O94769 699 aaPredicted RBP12.94□□□□□ -0.34
SDHD-208ENST00000534010 HMGCRP04035 888 aa12.94□□□□□ -0.34
SDHD-208ENST00000534010 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
SDHD-208ENST00000534010 GRB14Q14449 540 aa12.94□□□□□ -0.34
SDHD-208ENST00000534010 PRPF38BQ5VTL8 546 aaKnown RBP12.94□□□□□ -0.34
SDHD-208ENST00000534010 SHCBP1Q8NEM2 672 aa12.94□□□□□ -0.34
SDHD-208ENST00000534010 SOCS4Q8WXH5 440 aa12.94□□□□□ -0.34
SDHD-208ENST00000534010 DDRGK1Q96HY6 314 aa12.94□□□□□ -0.34
SDHD-208ENST00000534010 FSD1Q9BTV5 496 aa12.94□□□□□ -0.34
SDHD-208ENST00000534010 LNPKQ9C0E8 428 aa12.94□□□□□ -0.34
SDHD-208ENST00000534010 ARHGEF10LQ9HCE6 1279 aa12.94□□□□□ -0.34
SDHD-208ENST00000534010 HELLSQ9NRZ9 838 aa12.94□□□□□ -0.34
SDHD-208ENST00000534010 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
SDHD-208ENST00000534010 A0A0D9SFI3 127 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 MPHOSPH10O00566 681 aaKnown RBP12.93□□□□□ -0.34
SDHD-208ENST00000534010 SGPL1O95470 568 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 UBXN2AP68543 259 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 VPS53Q5VIR6 699 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.93□□□□□ -0.34
SDHD-208ENST00000534010 PLEKHH3Q7Z736 793 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 AMOTL1Q8IY63 956 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 MB21D1Q8N884 522 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 NEDD1Q8NHV4 660 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 U2AF1L4Q8WU68 220 aaKnown RBP12.93□□□□□ -0.34
SDHD-208ENST00000534010 NUDT12Q9BQG2 462 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 SH2D4AQ9H788 454 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 HOXC10Q9NYD6 342 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 PLXNA1Q9UIW2 1896 aa12.93□□□□□ -0.34
SDHD-208ENST00000534010 LAMA2P24043 3122 aaKnown RBP12.92□□□□□ -0.34
SDHD-208ENST00000534010 SLC15A5A6NIM6 579 aa12.92□□□□□ -0.34
SDHD-208ENST00000534010 PTPREP23469 700 aa12.92□□□□□ -0.34
SDHD-208ENST00000534010 PPARAQ07869 468 aa12.92□□□□□ -0.34
SDHD-208ENST00000534010 TRIM32Q13049 653 aa12.92□□□□□ -0.34
SDHD-208ENST00000534010 CCDC129Q6ZRS4 1044 aa12.92□□□□□ -0.34
SDHD-208ENST00000534010 ZNF589Q86UQ0 364 aaPredicted RBP12.92□□□□□ -0.34
SDHD-208ENST00000534010 FAM227BQ96M60 508 aa12.92□□□□□ -0.34
SDHD-208ENST00000534010 MOV10L1Q9BXT6 1211 aaKnown RBP12.92□□□□□ -0.34
SDHD-208ENST00000534010 SPATC1LQ9H0A9 340 aa12.92□□□□□ -0.34
SDHD-208ENST00000534010 RNF208Q9H0X6 261 aa12.92□□□□□ -0.34
SDHD-208ENST00000534010 MTMR4Q9NYA4 1195 aa12.92□□□□□ -0.34
SDHD-208ENST00000534010 ZNF214Q9UL59 606 aaPredicted RBP12.92□□□□□ -0.34
SDHD-208ENST00000534010 RPTORQ8N122 1335 aa12.91□□□□□ -0.34
SDHD-208ENST00000534010 ORC4O43929 436 aa12.91□□□□□ -0.34
SDHD-208ENST00000534010 PDE4AP27815 886 aa12.91□□□□□ -0.34
SDHD-208ENST00000534010 CCNA1P78396 465 aa12.91□□□□□ -0.34
SDHD-208ENST00000534010 MAP2K5Q13163 448 aa12.91□□□□□ -0.34
SDHD-208ENST00000534010 TRMT44Q8IYL2 757 aaKnown RBP12.91□□□□□ -0.34
SDHD-208ENST00000534010 ABRAQ8N0Z2 381 aa12.91□□□□□ -0.34
SDHD-208ENST00000534010 ATG4CQ96DT6 458 aa12.91□□□□□ -0.34
SDHD-208ENST00000534010 CEP95Q96GE4 821 aa12.91□□□□□ -0.34
SDHD-208ENST00000534010 APBA2Q99767 749 aa12.91□□□□□ -0.34
SDHD-208ENST00000534010 PAGR1Q9BTK6 254 aa12.91□□□□□ -0.34
SDHD-208ENST00000534010 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
SDHD-208ENST00000534010 PPP1R9AQ9ULJ8 1098 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms