RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 CDKAL1Q5VV42 579 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 WDR93Q6P2C0 686 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 PLCD3Q8N3E9 789 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 IGDCC4Q8TDY8 1250 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 ATRIPQ8WXE1 791 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 SUGCTQ9HAC7 445 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 LRP5O75197 1615 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 NID2Q14112 1375 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 SYNRGQ9UMZ2 1314 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 NTSR2O95665 410 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 KCNQ4P56696 695 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 LY9Q9HBG7 655 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 SENP2Q9HC62 589 aa16.75■□□□□ 0.27
CAPN1-224ENST00000533129 SRPRBQ9Y5M8 271 aaKnown RBP16.75■□□□□ 0.27
CAPN1-224ENST00000533129 RHOXF2BP0C7M4 288 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 GRAMD1CQ8IYS0 662 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 NKX2-3Q8TAU0 364 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 RHOXF2Q9BQY4 288 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 SLC26A6Q9BXS9 759 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 FOXP1Q9H334 677 aaPredicted RBP16.74■□□□□ 0.27
CAPN1-224ENST00000533129 VIPAS39Q9H9C1 493 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 BTBD18B2RXH4 712 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 FILIP1LQ4L180 1135 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 LDHAL6AQ6ZMR3 332 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 NFXL1Q6ZNB6 911 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 TMTC1Q8IUR5 882 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 CCDC102AQ96A19 550 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 AKAP11Q9UKA4 1901 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 RIC1Q4ADV7 1423 aa16.74■□□□□ 0.27
CAPN1-224ENST00000533129 B4E1Z4 1266 aa16.73■□□□□ 0.27
CAPN1-224ENST00000533129 LIFRP42702 1097 aa16.73■□□□□ 0.27
CAPN1-224ENST00000533129 DIS3L2Q8IYB7 885 aaKnown RBP16.73■□□□□ 0.27
CAPN1-224ENST00000533129 CEP131Q9UPN4 1083 aa16.73■□□□□ 0.27
CAPN1-224ENST00000533129 IFNAR1P17181 557 aa16.73■□□□□ 0.27
CAPN1-224ENST00000533129 ADD2P35612 726 aa16.73■□□□□ 0.27
CAPN1-224ENST00000533129 CUL4BQ13620 913 aa16.73■□□□□ 0.27
CAPN1-224ENST00000533129 WWC2Q6AWC2 1192 aa16.73■□□□□ 0.27
CAPN1-224ENST00000533129 CPLX3Q8WVH0 158 aa16.73■□□□□ 0.27
CAPN1-224ENST00000533129 SEC31BQ9NQW1 1179 aa16.73■□□□□ 0.27
CAPN1-224ENST00000533129 RIPOR2Q9Y4F9 1068 aa16.73■□□□□ 0.27
CAPN1-224ENST00000533129 MYH8P13535 1937 aa16.73■□□□□ 0.27
CAPN1-224ENST00000533129 CHD4Q14839 1912 aa16.73■□□□□ 0.27
CAPN1-224ENST00000533129 GYPCP04921 128 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 CASP14P31944 242 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 AARSP49588 968 aaKnown RBP eCLIP16.72■□□□□ 0.27
CAPN1-224ENST00000533129 TMEM67Q5HYA8 995 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 CDC5LQ99459 802 aaKnown RBP16.72■□□□□ 0.27
CAPN1-224ENST00000533129 NARFQ9UHQ1 456 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 RTL9Q8NET4 1388 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 TAF1LQ8IZX4 1826 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 AMPD2Q01433 879 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 FOXR1Q6PIV2 292 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 LRRC31Q6UY01 552 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 CNNM1Q9NRU3 951 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 EIF3CLB5ME19 914 aaKnown RBP16.72■□□□□ 0.27
CAPN1-224ENST00000533129 GNPATO15228 680 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 CORO7P57737 925 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 TTC31Q49AM3 519 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-224ENST00000533129 METTL24Q5JXM2 366 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 CTCFLQ8NI51 663 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-224ENST00000533129 EIF3CQ99613 913 aaKnown RBP16.72■□□□□ 0.27
CAPN1-224ENST00000533129 RTCBQ9Y3I0 505 aaKnown RBP16.72■□□□□ 0.27
CAPN1-224ENST00000533129 SLC12A7Q9Y666 1083 aa16.72■□□□□ 0.27
CAPN1-224ENST00000533129 LRRIQ3A6PVS8 624 aaPredicted RBP16.71■□□□□ 0.27
CAPN1-224ENST00000533129 UBE2Q2LH0YL09 131 aa16.71■□□□□ 0.27
CAPN1-224ENST00000533129 ICE2Q659A1 982 aa16.71■□□□□ 0.27
CAPN1-224ENST00000533129 FAM196AQ6ZSG2 479 aa16.71■□□□□ 0.27
CAPN1-224ENST00000533129 ACRBPQ8NEB7 543 aa16.71■□□□□ 0.27
CAPN1-224ENST00000533129 MYL10Q9BUA6 226 aa16.71■□□□□ 0.27
CAPN1-224ENST00000533129 FAM204AQ9H8W3 233 aa16.71■□□□□ 0.27
CAPN1-224ENST00000533129 ARHGAP25P42331 645 aa16.71■□□□□ 0.26
CAPN1-224ENST00000533129 FXR1P51114 621 aaKnown RBP eCLIP16.71■□□□□ 0.26
CAPN1-224ENST00000533129 CCDC152Q4G0S7 254 aa16.71■□□□□ 0.26
CAPN1-224ENST00000533129 PI16Q6UXB8 463 aa16.71■□□□□ 0.26
CAPN1-224ENST00000533129 KRT27Q7Z3Y8 459 aa16.71■□□□□ 0.26
CAPN1-224ENST00000533129 MYO6Q9UM54 1294 aa16.71■□□□□ 0.26
CAPN1-224ENST00000533129 PCDHB6Q9Y5E3 794 aa16.71■□□□□ 0.26
CAPN1-224ENST00000533129 CD44P16070 742 aaKnown RBP16.7■□□□□ 0.26
CAPN1-224ENST00000533129 MCM3P25205 808 aa16.7■□□□□ 0.26
CAPN1-224ENST00000533129 TRIM22Q8IYM9 498 aa16.7■□□□□ 0.26
CAPN1-224ENST00000533129 NOA1Q8NC60 698 aaKnown RBP16.7■□□□□ 0.26
CAPN1-224ENST00000533129 PPM1EQ8WY54 764 aa16.7■□□□□ 0.26
CAPN1-224ENST00000533129 YY1AP1Q9H869 796 aa16.7■□□□□ 0.26
CAPN1-224ENST00000533129 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
CAPN1-224ENST00000533129 UBE3CQ15386 1083 aa16.7■□□□□ 0.26
CAPN1-224ENST00000533129 CYP26C1Q6V0L0 522 aa16.7■□□□□ 0.26
CAPN1-224ENST00000533129 SH3RF1Q7Z6J0 888 aa16.7■□□□□ 0.26
CAPN1-224ENST00000533129 CCDC148Q8NFR7 591 aa16.7■□□□□ 0.26
CAPN1-224ENST00000533129 CSRNP2Q9H175 543 aa16.7■□□□□ 0.26
CAPN1-224ENST00000533129 ABHD10Q9NUJ1 306 aa16.7■□□□□ 0.26
CAPN1-224ENST00000533129 AATFQ9NY61 560 aaKnown RBP eCLIP16.7■□□□□ 0.266e-6■■■■■ 54.7
CAPN1-224ENST00000533129 PPFIA4O75335 1185 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 TFRCP02786 760 aaKnown RBP16.69■□□□□ 0.26
CAPN1-224ENST00000533129 APPP05067 770 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 ERVK-24P63145 666 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 TRIM14Q14142 442 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 TTF1Q15361 905 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-224ENST00000533129 ZFP91Q96JP5 570 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-224ENST00000533129 GSDMAQ96QA5 445 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms