RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 GUCD1Q96NT3 240 aa14.01□□□□□ -0.17
CMTM1-216ENST00000533078 SPATC1LQ9H0A9 340 aa14.01□□□□□ -0.17
CMTM1-216ENST00000533078 MROH8Q9H579 483 aa14.01□□□□□ -0.17
CMTM1-216ENST00000533078 MAGEB6P1A0A0J9YX57 407 aa14□□□□□ -0.17
CMTM1-216ENST00000533078 SEPT2Q15019 361 aa14□□□□□ -0.17
CMTM1-216ENST00000533078 POTEEQ6S8J3 1075 aa14□□□□□ -0.17
CMTM1-216ENST00000533078 SLC39A5Q6ZMH5 540 aa14□□□□□ -0.17
CMTM1-216ENST00000533078 NCAPG2Q86XI2 1143 aa14□□□□□ -0.17
CMTM1-216ENST00000533078 ITPRIPQ8IWB1 547 aa14□□□□□ -0.17
CMTM1-216ENST00000533078 AMOTL1Q8IY63 956 aa14□□□□□ -0.17
CMTM1-216ENST00000533078 MOV10L1Q9BXT6 1211 aaKnown RBP14□□□□□ -0.17
CMTM1-216ENST00000533078 ARHGEF10LQ9HCE6 1279 aa14□□□□□ -0.17
CMTM1-216ENST00000533078 MCM9Q9NXL9 1143 aa14□□□□□ -0.17
CMTM1-216ENST00000533078 TLR7Q9NYK1 1049 aaKnown RBP14□□□□□ -0.17
CMTM1-216ENST00000533078 NOP58Q9Y2X3 529 aaKnown RBP14□□□□□ -0.17
CMTM1-216ENST00000533078 FLOT1O75955 427 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 ERCC3P19447 782 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 SHMT1P34896 483 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 PLCD1P51178 756 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 HSP90AB4PQ58FF6 505 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 TMEM179Q6ZVK1 233 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 AACSQ86V21 672 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 ABRAQ8N0Z2 381 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 EAF2Q96CJ1 260 aaPredicted RBP13.99□□□□□ -0.17
CMTM1-216ENST00000533078 C1orf115Q9H7X2 142 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 SWAP70Q9UH65 585 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 TNNQ9UQP3 1299 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 NAV1Q8NEY1 1877 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 ZNF236Q9UL36 1845 aa13.99□□□□□ -0.17
CMTM1-216ENST00000533078 RARBP10826 455 aa13.98□□□□□ -0.17
CMTM1-216ENST00000533078 FCER1AP12319 257 aa13.98□□□□□ -0.17
CMTM1-216ENST00000533078 TRIM60Q495X7 471 aa13.98□□□□□ -0.17
CMTM1-216ENST00000533078 ANO1Q5XXA6 986 aa13.98□□□□□ -0.17
CMTM1-216ENST00000533078 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
CMTM1-216ENST00000533078 RNF180Q86T96 592 aa13.98□□□□□ -0.17
CMTM1-216ENST00000533078 TRPV1Q8NER1 839 aa13.98□□□□□ -0.17
CMTM1-216ENST00000533078 MAFAQ8NHW3 353 aaPredicted RBP13.98□□□□□ -0.17
CMTM1-216ENST00000533078 DDRGK1Q96HY6 314 aa13.98□□□□□ -0.17
CMTM1-216ENST00000533078 SLC25A27O95847 323 aa13.97□□□□□ -0.17
CMTM1-216ENST00000533078 ADCYAP1R1P41586 468 aa13.97□□□□□ -0.17
CMTM1-216ENST00000533078 SMAD3P84022 425 aaKnown RBP13.97□□□□□ -0.17
CMTM1-216ENST00000533078 SHHQ15465 462 aa13.97□□□□□ -0.17
CMTM1-216ENST00000533078 SLC9C2Q5TAH2 1124 aa13.97□□□□□ -0.17
CMTM1-216ENST00000533078 BADQ92934 168 aa13.97□□□□□ -0.17
CMTM1-216ENST00000533078 CDX2Q99626 313 aaPredicted RBP13.97□□□□□ -0.17
CMTM1-216ENST00000533078 RIOK1Q9BRS2 568 aaKnown RBP13.97□□□□□ -0.17
CMTM1-216ENST00000533078 ANTXR1Q9H6X2 564 aa13.97□□□□□ -0.17
CMTM1-216ENST00000533078 NRBP1Q9UHY1 535 aa13.97□□□□□ -0.17
CMTM1-216ENST00000533078 TACC3Q9Y6A5 838 aa13.97□□□□□ -0.17
CMTM1-216ENST00000533078 RLFQ13129 1914 aa13.97□□□□□ -0.17
CMTM1-216ENST00000533078 LTBP2Q14767 1821 aa13.97□□□□□ -0.17
CMTM1-216ENST00000533078 SPTBN5Q9NRC6 3674 aaKnown RBP13.96□□□□□ -0.17
CMTM1-216ENST00000533078 CCER2I3L3R5 266 aa13.96□□□□□ -0.17
CMTM1-216ENST00000533078 FOSL2P15408 326 aa13.96□□□□□ -0.17
CMTM1-216ENST00000533078 DSG3P32926 999 aa13.96□□□□□ -0.17
CMTM1-216ENST00000533078 ICA1Q05084 483 aa13.96□□□□□ -0.17
CMTM1-216ENST00000533078 GABPAQ06546 454 aa13.96□□□□□ -0.17
CMTM1-216ENST00000533078 SNX17Q15036 470 aa13.96□□□□□ -0.17
CMTM1-216ENST00000533078 LRRC41Q15345 812 aa13.96□□□□□ -0.17
CMTM1-216ENST00000533078 C1orf53Q5VUE5 145 aa13.96□□□□□ -0.17
CMTM1-216ENST00000533078 SYMPKQ92797 1274 aaKnown RBP13.96□□□□□ -0.17
CMTM1-216ENST00000533078 FERMT2Q96AC1 680 aa13.96□□□□□ -0.17
CMTM1-216ENST00000533078 SEMA6BQ9H3T3 888 aa13.96□□□□□ -0.17
CMTM1-216ENST00000533078 XPNPEP3Q9NQH7 507 aa13.96□□□□□ -0.17
CMTM1-216ENST00000533078 PDLIM7Q9NR12 457 aa13.96□□□□□ -0.17
CMTM1-216ENST00000533078 MYH8P13535 1937 aa13.96□□□□□ -0.18
CMTM1-216ENST00000533078 TMEM265A0A087WTH1 108 aa13.95□□□□□ -0.18
CMTM1-216ENST00000533078 WDR46O15213 610 aaKnown RBP13.95□□□□□ -0.18
CMTM1-216ENST00000533078 COBLO75128 1261 aa13.95□□□□□ -0.18
CMTM1-216ENST00000533078 RAG1P15918 1043 aa13.95□□□□□ -0.18
CMTM1-216ENST00000533078 PDE6AP16499 860 aa13.95□□□□□ -0.18
CMTM1-216ENST00000533078 GUCY1A2P33402 732 aa13.95□□□□□ -0.18
CMTM1-216ENST00000533078 COPB2P35606 906 aa13.95□□□□□ -0.18
CMTM1-216ENST00000533078 KCTD2Q14681 263 aa13.95□□□□□ -0.18
CMTM1-216ENST00000533078 CLASRPQ8N2M8 674 aaKnown RBP13.95□□□□□ -0.18
CMTM1-216ENST00000533078 MAML3Q96JK9 1138 aa13.95□□□□□ -0.18
CMTM1-216ENST00000533078 RNPC3Q96LT9 517 aaKnown RBP13.95□□□□□ -0.18
CMTM1-216ENST00000533078 CCDC17Q96LX7 622 aa13.95□□□□□ -0.18
CMTM1-216ENST00000533078 MMP19Q99542 508 aa13.95□□□□□ -0.18
CMTM1-216ENST00000533078 DNAJC2Q99543 621 aaKnown RBP13.95□□□□□ -0.18
CMTM1-216ENST00000533078 ZNF532Q9HCE3 1301 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 A0A1W2PRG0 241 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 CLTBP09497 229 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 IFIT2P09913 472 aaKnown RBP13.94□□□□□ -0.18
CMTM1-216ENST00000533078 FAM47AQ5JRC9 791 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 PRAMEF19Q5SWL8 479 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 C9orf50Q5SZB4 431 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 SPICE1Q8N0Z3 855 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 SDR42E1Q8WUS8 393 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 ATG4CQ96DT6 458 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 VCPKMTQ9H867 229 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 CNPY2Q9Y2B0 182 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 EXOC6BQ9Y2D4 811 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 TMX2Q9Y320 296 aa13.94□□□□□ -0.18
CMTM1-216ENST00000533078 A0A0G2JMZ2 1700 aa13.93□□□□□ -0.18
CMTM1-216ENST00000533078 GOLIM4O00461 696 aa13.93□□□□□ -0.18
CMTM1-216ENST00000533078 RAD21O60216 631 aa13.93□□□□□ -0.18
CMTM1-216ENST00000533078 IGHA2P01877 340 aa13.93□□□□□ -0.18
CMTM1-216ENST00000533078 TLE2Q04725 743 aa13.93□□□□□ -0.18
CMTM1-216ENST00000533078 CEP85Q6P2H3 762 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms