RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 SPDYE16A6NNV3 312 aaPredicted RBP19.84■□□□□ 0.77
PKP3-209ENST00000533069 WDR46O15213 610 aaKnown RBP19.84■□□□□ 0.77
PKP3-209ENST00000533069 EEF2P13639 858 aaKnown RBP19.84■□□□□ 0.77
PKP3-209ENST00000533069 PDE4BQ07343 736 aa19.84■□□□□ 0.77
PKP3-209ENST00000533069 CCAR1Q8IX12 1150 aaKnown RBP19.84■□□□□ 0.77
PKP3-209ENST00000533069 SOCS4Q8WXH5 440 aa19.84■□□□□ 0.77
PKP3-209ENST00000533069 TANGO6Q9C0B7 1094 aa19.84■□□□□ 0.77
PKP3-209ENST00000533069 HOXC10Q9NYD6 342 aa19.84■□□□□ 0.77
PKP3-209ENST00000533069 RBBP6Q7Z6E9 1792 aaKnown RBP19.84■□□□□ 0.77
PKP3-209ENST00000533069 CENPFP49454 3210 aa19.84■□□□□ 0.77
PKP3-209ENST00000533069 ATP2B2Q01814 1243 aa19.83■□□□□ 0.77
PKP3-209ENST00000533069 PPARAQ07869 468 aa19.83■□□□□ 0.77
PKP3-209ENST00000533069 COG2Q14746 738 aa19.83■□□□□ 0.77
PKP3-209ENST00000533069 MCMDC2Q4G0Z9 681 aa19.83■□□□□ 0.77
PKP3-209ENST00000533069 POTEEQ6S8J3 1075 aa19.83■□□□□ 0.77
PKP3-209ENST00000533069 CCDC129Q6ZRS4 1044 aa19.83■□□□□ 0.77
PKP3-209ENST00000533069 CENPQQ7L2Z9 268 aaPredicted RBP19.83■□□□□ 0.77
PKP3-209ENST00000533069 ZNF444Q8N0Y2 327 aaPredicted RBP19.83■□□□□ 0.77
PKP3-209ENST00000533069 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.83■□□□□ 0.77
PKP3-209ENST00000533069 GOPCQ9HD26 462 aa19.83■□□□□ 0.77
PKP3-209ENST00000533069 MGAMO43451 1857 aa19.82■□□□□ 0.76
PKP3-209ENST00000533069 FOXP2O15409 715 aa19.82■□□□□ 0.76
PKP3-209ENST00000533069 CNMDO75829 334 aa19.82■□□□□ 0.76
PKP3-209ENST00000533069 MYCP01106 439 aaPredicted RBP19.82■□□□□ 0.76
PKP3-209ENST00000533069 Q3C1V9 767 aa19.82■□□□□ 0.76
PKP3-209ENST00000533069 STK11IPQ8N1F8 1099 aa19.82■□□□□ 0.76
PKP3-209ENST00000533069 RILPL2Q969X0 211 aa19.82■□□□□ 0.76
PKP3-209ENST00000533069 NYAP2Q9P242 653 aa19.82■□□□□ 0.76
PKP3-209ENST00000533069 GJD2Q9UKL4 321 aa19.82■□□□□ 0.76
PKP3-209ENST00000533069 A0A0D9SFI3 127 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 PEX10O60683 326 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 CCL5P13501 91 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 ELNP15502 786 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 EN2P19622 333 aaPredicted RBP19.81■□□□□ 0.76
PKP3-209ENST00000533069 MTFR1Q15390 333 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 KIAA1755Q5JYT7 1200 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 SPICE1Q8N0Z3 855 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 MB21D1Q8N884 522 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 NKX2-3Q8TAU0 364 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 FAM227BQ96M60 508 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 NUDT12Q9BQG2 462 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 PORCNQ9H237 461 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 CWC22Q9HCG8 908 aaKnown RBP19.81■□□□□ 0.76
PKP3-209ENST00000533069 PLIN4Q96Q06 1357 aa19.81■□□□□ 0.76
PKP3-209ENST00000533069 IGKV6D-41A0A0C4DH26 115 aa19.8■□□□□ 0.76
PKP3-209ENST00000533069 PRDM1O75626 825 aa19.8■□□□□ 0.76
PKP3-209ENST00000533069 INHAP05111 366 aa19.8■□□□□ 0.76
PKP3-209ENST00000533069 ALX1Q15699 326 aa19.8■□□□□ 0.76
PKP3-209ENST00000533069 GPR142Q7Z601 462 aa19.8■□□□□ 0.76
PKP3-209ENST00000533069 PLEKHH3Q7Z736 793 aa19.8■□□□□ 0.76
PKP3-209ENST00000533069 SYNPO2Q9UMS6 1093 aa19.8■□□□□ 0.76
PKP3-209ENST00000533069 MYH8P13535 1937 aa19.8■□□□□ 0.76
PKP3-209ENST00000533069 ZMYM6O95789 1325 aa19.79■□□□□ 0.76
PKP3-209ENST00000533069 TNRC18O15417 2968 aaPredicted RBP19.79■□□□□ 0.76
PKP3-209ENST00000533069 FLOT1O75955 427 aa19.79■□□□□ 0.76
PKP3-209ENST00000533069 HMGCRP04035 888 aa19.79■□□□□ 0.76
PKP3-209ENST00000533069 GJB1P08034 283 aa19.79■□□□□ 0.76
PKP3-209ENST00000533069 TSPY3P0CV98 308 aa19.79■□□□□ 0.76
PKP3-209ENST00000533069 TSPY8P0CW00 308 aa19.79■□□□□ 0.76
PKP3-209ENST00000533069 XRCC5P13010 732 aaKnown RBP19.79■□□□□ 0.76
PKP3-209ENST00000533069 DSG3P32926 999 aa19.79■□□□□ 0.76
PKP3-209ENST00000533069 MFAP1P55081 439 aaKnown RBP19.79■□□□□ 0.76
PKP3-209ENST00000533069 NMIQ13287 307 aaPredicted RBP19.79■□□□□ 0.76
PKP3-209ENST00000533069 VPS53Q5VIR6 699 aa19.79■□□□□ 0.76
PKP3-209ENST00000533069 TRMT44Q8IYL2 757 aaKnown RBP19.79■□□□□ 0.76
PKP3-209ENST00000533069 RNF208Q9H0X6 261 aa19.79■□□□□ 0.76
PKP3-209ENST00000533069 BTBD7Q9P203 1132 aa19.79■□□□□ 0.76
PKP3-209ENST00000533069 ANAPC4Q9UJX5 808 aa19.79■□□□□ 0.76
PKP3-209ENST00000533069 CCDC171Q6TFL3 1326 aa19.78■□□□□ 0.76
PKP3-209ENST00000533069 HIP1O00291 1037 aa19.78■□□□□ 0.76
PKP3-209ENST00000533069 CAPN2P17655 700 aa19.78■□□□□ 0.76
PKP3-209ENST00000533069 SDSP20132 328 aa19.78■□□□□ 0.76
PKP3-209ENST00000533069 RGS2P41220 211 aa19.78■□□□□ 0.76
PKP3-209ENST00000533069 PPP4R3BQ5MIZ7 849 aa19.78■□□□□ 0.76
PKP3-209ENST00000533069 NEDD1Q8NHV4 660 aa19.78■□□□□ 0.76
PKP3-209ENST00000533069 GREB1LQ9C091 1923 aaPredicted RBP19.78■□□□□ 0.76
PKP3-209ENST00000533069 GJA8P48165 433 aa19.77■□□□□ 0.76
PKP3-209ENST00000533069 MORN1Q5T089 497 aa19.77■□□□□ 0.76
PKP3-209ENST00000533069 USP6NLQ92738 828 aa19.77■□□□□ 0.76
PKP3-209ENST00000533069 APBA2Q99767 749 aa19.77■□□□□ 0.76
PKP3-209ENST00000533069 UNC93B1Q9H1C4 597 aa19.77■□□□□ 0.76
PKP3-209ENST00000533069 DIAPH3Q9NSV4 1193 aa19.77■□□□□ 0.76
PKP3-209ENST00000533069 MTMR4Q9NYA4 1195 aa19.77■□□□□ 0.76
PKP3-209ENST00000533069 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.77■□□□□ 0.762e-6■■■■□ 20.8
PKP3-209ENST00000533069 IVNS1ABPQ9Y6Y0 642 aa19.77■□□□□ 0.76
PKP3-209ENST00000533069 RAD21O60216 631 aa19.76■□□□□ 0.75
PKP3-209ENST00000533069 TTLL1O95922 423 aa19.76■□□□□ 0.75
PKP3-209ENST00000533069 CYP2B6P20813 491 aa19.76■□□□□ 0.75
PKP3-209ENST00000533069 TFAP4Q01664 338 aa19.76■□□□□ 0.75
PKP3-209ENST00000533069 WDR78Q5VTH9 848 aa19.76■□□□□ 0.75
PKP3-209ENST00000533069 ZNF589Q86UQ0 364 aaPredicted RBP19.76■□□□□ 0.75
PKP3-209ENST00000533069 SHCBP1Q8NEM2 672 aa19.76■□□□□ 0.75
PKP3-209ENST00000533069 MKL1Q969V6 931 aa19.76■□□□□ 0.75
PKP3-209ENST00000533069 CEP95Q96GE4 821 aa19.76■□□□□ 0.75
PKP3-209ENST00000533069 SPATC1LQ9H0A9 340 aa19.76■□□□□ 0.75
PKP3-209ENST00000533069 CLIP2Q9UDT6 1046 aa19.76■□□□□ 0.75
PKP3-209ENST00000533069 SLC15A5A6NIM6 579 aa19.75■□□□□ 0.75
PKP3-209ENST00000533069 F5H6K3 240 aa19.75■□□□□ 0.75
PKP3-209ENST00000533069 HSPD1P10809 573 aaKnown RBP19.75■□□□□ 0.75
PKP3-209ENST00000533069 PTPREP23469 700 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms