RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 SEPT4O43236 478 aa15.41■□□□□ 0.06
AP004550.1-201ENST00000532652 IGSF3O75054 1194 aa15.41■□□□□ 0.06
AP004550.1-201ENST00000532652 FOSL2P15408 326 aa15.41■□□□□ 0.06
AP004550.1-201ENST00000532652 ADORA2AP29274 412 aa15.41■□□□□ 0.06
AP004550.1-201ENST00000532652 USP5P45974 858 aa15.41■□□□□ 0.06
AP004550.1-201ENST00000532652 MIGA1Q8NAN2 632 aa15.41■□□□□ 0.06
AP004550.1-201ENST00000532652 FERMT2Q96AC1 680 aa15.41■□□□□ 0.06
AP004550.1-201ENST00000532652 MOV10L1Q9BXT6 1211 aaKnown RBP15.41■□□□□ 0.06
AP004550.1-201ENST00000532652 REV3LO60673 3130 aa15.4■□□□□ 0.06
AP004550.1-201ENST00000532652 TRIM43BA6NCK2 446 aa15.4■□□□□ 0.06
AP004550.1-201ENST00000532652 GUCY1A2P33402 732 aa15.4■□□□□ 0.06
AP004550.1-201ENST00000532652 ADCYAP1R1P41586 468 aa15.4■□□□□ 0.06
AP004550.1-201ENST00000532652 TRIM43Q96BQ3 446 aaPredicted RBP15.4■□□□□ 0.06
AP004550.1-201ENST00000532652 ZNF512BQ96KM6 892 aaPredicted RBP15.4■□□□□ 0.06
AP004550.1-201ENST00000532652 CABP5Q9NP86 173 aa15.4■□□□□ 0.06
AP004550.1-201ENST00000532652 TNNQ9UQP3 1299 aa15.4■□□□□ 0.06
AP004550.1-201ENST00000532652 BRWD1Q9NSI6 2320 aa15.4■□□□□ 0.06
AP004550.1-201ENST00000532652 ZNF316A6NFI3 1004 aaPredicted RBP15.39■□□□□ 0.05
AP004550.1-201ENST00000532652 STRNO43815 780 aa15.39■□□□□ 0.05
AP004550.1-201ENST00000532652 IDH1O75874 414 aaKnown RBP15.39■□□□□ 0.05
AP004550.1-201ENST00000532652 SHMT1P34896 483 aa15.39■□□□□ 0.05
AP004550.1-201ENST00000532652 OS9Q13438 667 aaPredicted RBP15.39■□□□□ 0.05
AP004550.1-201ENST00000532652 LRRC41Q15345 812 aa15.39■□□□□ 0.05
AP004550.1-201ENST00000532652 PRAMEF19Q5SWL8 479 aa15.39■□□□□ 0.05
AP004550.1-201ENST00000532652 TTC6Q86TZ1 520 aa15.39■□□□□ 0.05
AP004550.1-201ENST00000532652 SPATC1LQ9H0A9 340 aa15.39■□□□□ 0.05
AP004550.1-201ENST00000532652 CHD7Q9P2D1 2997 aa15.39■□□□□ 0.05
AP004550.1-201ENST00000532652 CHD9Q3L8U1 2897 aa15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 PRRC2BQ5JSZ5 2229 aaKnown RBP15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 COBLO75128 1261 aa15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 ERCC3P19447 782 aa15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 PLCD1P51178 756 aa15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 TLE2Q04725 743 aa15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 COG2Q14746 738 aa15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 SEPT2Q15019 361 aa15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 FAM47AQ5JRC9 791 aa15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 C1orf53Q5VUE5 145 aa15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 CERS3Q8IU89 383 aa15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 MAGEB6Q8N7X4 407 aa15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 SYMPKQ92797 1274 aaKnown RBP15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 HOXC10Q9NYD6 342 aa15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 DBNLQ9UJU6 430 aaKnown RBP15.38■□□□□ 0.05
AP004550.1-201ENST00000532652 TMEM265A0A087WTH1 108 aa15.37■□□□□ 0.05
AP004550.1-201ENST00000532652 TRIM27P14373 513 aa15.37■□□□□ 0.05
AP004550.1-201ENST00000532652 ITGB8P26012 769 aa15.37■□□□□ 0.05
AP004550.1-201ENST00000532652 POLA2Q14181 598 aa15.37■□□□□ 0.05
AP004550.1-201ENST00000532652 SHCBP1Q8NEM2 672 aa15.37■□□□□ 0.05
AP004550.1-201ENST00000532652 RNPC3Q96LT9 517 aaKnown RBP15.37■□□□□ 0.05
AP004550.1-201ENST00000532652 TANGO6Q9C0B7 1094 aa15.37■□□□□ 0.05
AP004550.1-201ENST00000532652 TLR7Q9NYK1 1049 aaKnown RBP15.37■□□□□ 0.05
AP004550.1-201ENST00000532652 A0A1W2PRG0 241 aa15.36■□□□□ 0.05
AP004550.1-201ENST00000532652 EPHB4P54760 987 aa15.36■□□□□ 0.05
AP004550.1-201ENST00000532652 PLS1Q14651 629 aa15.36■□□□□ 0.05
AP004550.1-201ENST00000532652 MAML3Q96JK9 1138 aa15.36■□□□□ 0.05
AP004550.1-201ENST00000532652 CCDC8Q9H0W5 538 aaPredicted RBP15.36■□□□□ 0.05
AP004550.1-201ENST00000532652 SLC5A4Q9NY91 659 aa15.36■□□□□ 0.05
AP004550.1-201ENST00000532652 GREB1LQ9C091 1923 aaPredicted RBP15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 IPO8O15397 1037 aaKnown RBP15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 SURF6O75683 361 aaKnown RBP15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 CLTBP09497 229 aa15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 DSG3P32926 999 aa15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 EVX2Q03828 476 aa15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 NCAPG2Q86XI2 1143 aa15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 USP38Q8NB14 1042 aa15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 SSH3Q8TE77 659 aa15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 CLUAP1Q96AJ1 413 aa15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 MROH8Q9H579 483 aa15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 ANTXR1Q9H6X2 564 aa15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 PHF24Q9UPV7 400 aa15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 TACC3Q9Y6A5 838 aa15.35■□□□□ 0.05
AP004550.1-201ENST00000532652 MPHOSPH10O00566 681 aaKnown RBP15.34■□□□□ 0.05
AP004550.1-201ENST00000532652 POLR3DP05423 398 aaPredicted RBP15.34■□□□□ 0.05
AP004550.1-201ENST00000532652 ATP8B2P98198 1209 aa15.34■□□□□ 0.05
AP004550.1-201ENST00000532652 GABPAQ06546 454 aa15.34■□□□□ 0.05
AP004550.1-201ENST00000532652 GRIN2CQ14957 1233 aa15.34■□□□□ 0.05
AP004550.1-201ENST00000532652 KIAA1755Q5JYT7 1200 aa15.34■□□□□ 0.05
AP004550.1-201ENST00000532652 ABRAQ8N0Z2 381 aa15.34■□□□□ 0.05
AP004550.1-201ENST00000532652 MB21D1Q8N884 522 aa15.34■□□□□ 0.05
AP004550.1-201ENST00000532652 FRAT1Q92837 279 aaPredicted RBP15.34■□□□□ 0.05
AP004550.1-201ENST00000532652 XPNPEP3Q9NQH7 507 aa15.34■□□□□ 0.05
AP004550.1-201ENST00000532652 TRIP12Q14669 1992 aaPredicted RBP15.34■□□□□ 0.05
AP004550.1-201ENST00000532652 KIAA0355O15063 1070 aa15.33■□□□□ 0.04
AP004550.1-201ENST00000532652 BCAR3O75815 825 aa15.33■□□□□ 0.04
AP004550.1-201ENST00000532652 RARBP10826 455 aa15.33■□□□□ 0.04
AP004550.1-201ENST00000532652 RAG1P15918 1043 aa15.33■□□□□ 0.04
AP004550.1-201ENST00000532652 MAP3K12Q12852 859 aa15.33■□□□□ 0.04
AP004550.1-201ENST00000532652 TJAP1Q5JTD0 557 aa15.33■□□□□ 0.04
AP004550.1-201ENST00000532652 EAF2Q96CJ1 260 aaPredicted RBP15.33■□□□□ 0.04
AP004550.1-201ENST00000532652 ATG4CQ96DT6 458 aa15.33■□□□□ 0.04
AP004550.1-201ENST00000532652 RIOK1Q9BRS2 568 aaKnown RBP15.33■□□□□ 0.04
AP004550.1-201ENST00000532652 TRANK1O15050 2925 aa15.33■□□□□ 0.04
AP004550.1-201ENST00000532652 SCN5AQ14524 2016 aa15.33■□□□□ 0.04
AP004550.1-201ENST00000532652 PQBP1O60828 265 aaKnown RBP15.32■□□□□ 0.04
AP004550.1-201ENST00000532652 FLOT1O75955 427 aa15.32■□□□□ 0.04
AP004550.1-201ENST00000532652 PGK1P00558 417 aa15.32■□□□□ 0.04
AP004550.1-201ENST00000532652 FCER1AP12319 257 aa15.32■□□□□ 0.04
AP004550.1-201ENST00000532652 COL9A1P20849 921 aa15.32■□□□□ 0.04
AP004550.1-201ENST00000532652 DNAJB2P25686 324 aa15.32■□□□□ 0.04
AP004550.1-201ENST00000532652 FPGSQ05932 587 aa15.32■□□□□ 0.04
AP004550.1-201ENST00000532652 RNF180Q86T96 592 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms