RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 PCDHA1Q9Y5I3 950 aa13.11□□□□□ -0.31
CSRP1-215ENST00000532313 MROH1Q8NDA8 1641 aa13.11□□□□□ -0.31
CSRP1-215ENST00000532313 XPOTO43592 962 aaKnown RBP13.11□□□□□ -0.31
CSRP1-215ENST00000532313 GTF2A2P52657 109 aa13.11□□□□□ -0.31
CSRP1-215ENST00000532313 KLHL10Q6JEL2 608 aa13.11□□□□□ -0.31
CSRP1-215ENST00000532313 SLC17A8Q8NDX2 589 aa13.11□□□□□ -0.31
CSRP1-215ENST00000532313 TAF4BQ92750 862 aa13.11□□□□□ -0.31
CSRP1-215ENST00000532313 TM6SF1Q9BZW5 370 aa13.11□□□□□ -0.31
CSRP1-215ENST00000532313 TNKSO95271 1327 aa13.11□□□□□ -0.31
CSRP1-215ENST00000532313 SMCO2A6NFE2 343 aa13.11□□□□□ -0.31
CSRP1-215ENST00000532313 POTEAQ6S8J7 498 aa13.11□□□□□ -0.31
CSRP1-215ENST00000532313 SLF1Q9BQI6 1058 aa13.11□□□□□ -0.31
CSRP1-215ENST00000532313 PUF60Q9UHX1 559 aaKnown RBP13.11□□□□□ -0.31
CSRP1-215ENST00000532313 CHMP2AO43633 222 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 CCNT1O60563 726 aaKnown RBP13.1□□□□□ -0.31
CSRP1-215ENST00000532313 IGKV5-2P06315 115 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 SCARF1Q14162 830 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 RCSD1Q6JBY9 416 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 FAM227BQ96M60 508 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 PALD1Q9ULE6 856 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 CCDC169A6NNP5 214 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 DIXDC1Q155Q3 683 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 TMX3Q96JJ7 454 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 TRIM47Q96LD4 638 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 FHDC1Q9C0D6 1143 aaPredicted RBP13.1□□□□□ -0.31
CSRP1-215ENST00000532313 MYOZ2Q9NPC6 264 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 GLIPR1L2Q4G1C9 344 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 ASB14A6NK59 587 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 CALCRLQ16602 461 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 MB21D1Q8N884 522 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 FRMD4BQ9Y2L6 1034 aa13.1□□□□□ -0.31
CSRP1-215ENST00000532313 E7EWF7 191 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 PPP2R5AQ15172 486 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 ANGEL2Q5VTE6 544 aaKnown RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 NCAPH2Q6IBW4 605 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 INTS5Q6P9B9 1019 aaKnown RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 TNNQ9UQP3 1299 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 USP50Q70EL3 339 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 DEPTORQ8TB45 409 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 GOLGA1Q92805 767 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 INTS4Q96HW7 963 aaKnown RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 TCEANC2Q96MN5 208 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 TTC12Q9H892 705 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 STAP2Q9UGK3 403 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 ZSCAN22P10073 491 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 HSPD1P10809 573 aaKnown RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 FCER1AP12319 257 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 PPM1FP49593 454 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 TKFCQ3LXA3 575 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 IQCEQ6IPM2 695 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 FAM151AQ8WW52 585 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 LBHD1Q9BQE6 289 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 KDM6AO15550 1401 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 SPTLC2O15270 562 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 YARSP54577 528 aaKnown RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 MIS18BP1Q6P0N0 1132 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 GPC2Q8N158 579 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 NECAB1Q8N987 351 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 MRPS27Q92552 414 aaKnown RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 LPAR1Q92633 364 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 NAP1L5Q96NT1 182 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 GBA2Q9HCG7 927 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-215ENST00000532313 USP25Q9UHP3 1055 aa13.09□□□□□ -0.31
CSRP1-215ENST00000532313 PSMD14O00487 310 aa13.08□□□□□ -0.31
CSRP1-215ENST00000532313 CYP2E1P05181 493 aaPredicted RBP13.08□□□□□ -0.31
CSRP1-215ENST00000532313 P4HA1P13674 534 aa13.08□□□□□ -0.31
CSRP1-215ENST00000532313 USP8P40818 1118 aa13.08□□□□□ -0.31
CSRP1-215ENST00000532313 RASA3Q14644 834 aa13.08□□□□□ -0.31
CSRP1-215ENST00000532313 WDR44Q5JSH3 913 aa13.08□□□□□ -0.31
CSRP1-215ENST00000532313 ACBD3Q9H3P7 528 aa13.08□□□□□ -0.31
CSRP1-215ENST00000532313 LRWD1Q9UFC0 647 aa13.08□□□□□ -0.31
CSRP1-215ENST00000532313 TRAK2O60296 914 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 GH2P01242 217 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 PHLPP2Q6ZVD8 1323 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 ADGRB2O60241 1585 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 BCL9O00512 1426 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 GCFC2P16383 781 aaKnown RBP13.08□□□□□ -0.32
CSRP1-215ENST00000532313 ATF7P17544 494 aaPredicted RBP13.08□□□□□ -0.32
CSRP1-215ENST00000532313 CDK8P49336 464 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 CTAGE1Q96RT6 745 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 WDR11Q9BZH6 1224 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 STX10O60499 249 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 SRGNP10124 158 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 CCDC183Q5T5S1 534 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 DGKHQ86XP1 1220 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 FANCBQ8NB91 859 aa13.08□□□□□ -0.32
CSRP1-215ENST00000532313 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.32
CSRP1-215ENST00000532313 FCGRTP55899 365 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 TRPC3Q13507 836 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 KCNV1Q6PIU1 500 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 PIK3AP1Q6ZUJ8 805 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 PLA2G4DQ86XP0 818 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 GPR101Q96P66 508 aaPredicted RBP13.07□□□□□ -0.32
CSRP1-215ENST00000532313 RUFY1Q96T51 708 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 KBTBD13C9JR72 458 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 YEATS4O95619 227 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 POLA2Q14181 598 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 TTC38Q5R3I4 469 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms