RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 DCP1AQ9NPI6 582 aaPredicted RBP22.31■■□□□ 1.16
SSSCA1-206ENST00000531405 IVNS1ABPQ9Y6Y0 642 aa22.31■■□□□ 1.16
SSSCA1-206ENST00000531405 PLXNA1Q9UIW2 1896 aa22.3■■□□□ 1.16
SSSCA1-206ENST00000531405 MFSD14CQ5VZR4 134 aa22.3■■□□□ 1.16
SSSCA1-206ENST00000531405 CLEC10AQ8IUN9 316 aa22.3■■□□□ 1.16
SSSCA1-206ENST00000531405 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.3■■□□□ 1.16
SSSCA1-206ENST00000531405 TANGO6Q9C0B7 1094 aa22.3■■□□□ 1.16
SSSCA1-206ENST00000531405 COG6Q9Y2V7 657 aa22.3■■□□□ 1.16
SSSCA1-206ENST00000531405 PRKAB2O43741 272 aa22.29■■□□□ 1.16
SSSCA1-206ENST00000531405 CYP2C19P33261 490 aa22.29■■□□□ 1.16
SSSCA1-206ENST00000531405 ATP2B2Q01814 1243 aa22.29■■□□□ 1.16
SSSCA1-206ENST00000531405 KIAA1755Q5JYT7 1200 aa22.29■■□□□ 1.16
SSSCA1-206ENST00000531405 DYNLL2Q96FJ2 89 aa22.29■■□□□ 1.16
SSSCA1-206ENST00000531405 SMCHD1A6NHR9 2005 aa22.29■■□□□ 1.16
SSSCA1-206ENST00000531405 SMIM22K7EJ46 135 aa22.28■■□□□ 1.16
SSSCA1-206ENST00000531405 HOXC6P09630 235 aa22.28■■□□□ 1.16
SSSCA1-206ENST00000531405 CNGA1P29973 690 aa22.28■■□□□ 1.16
SSSCA1-206ENST00000531405 RPAP2Q8IXW5 612 aaPredicted RBP22.28■■□□□ 1.16
SSSCA1-206ENST00000531405 TRPV1Q8NER1 839 aa22.28■■□□□ 1.16
SSSCA1-206ENST00000531405 MOV10L1Q9BXT6 1211 aaKnown RBP22.28■■□□□ 1.16
SSSCA1-206ENST00000531405 UBE2OQ9C0C9 1292 aaKnown RBP22.28■■□□□ 1.16
SSSCA1-206ENST00000531405 BOLA2Q9H3K6 86 aa22.28■■□□□ 1.16
SSSCA1-206ENST00000531405 LTBP2Q14767 1821 aa22.28■■□□□ 1.16
SSSCA1-206ENST00000531405 HMMRO75330 724 aa22.27■■□□□ 1.16
SSSCA1-206ENST00000531405 MBD4O95243 580 aa22.27■■□□□ 1.16
SSSCA1-206ENST00000531405 CHGBP05060 677 aa22.27■■□□□ 1.16
SSSCA1-206ENST00000531405 COG2Q14746 738 aa22.27■■□□□ 1.16
SSSCA1-206ENST00000531405 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.16
SSSCA1-206ENST00000531405 TDHQ8IZJ6 230 aa22.27■■□□□ 1.16
SSSCA1-206ENST00000531405 ZBTB40Q9NUA8 1239 aa22.27■■□□□ 1.16
SSSCA1-206ENST00000531405 PAG1Q9NWQ8 432 aa22.27■■□□□ 1.16
SSSCA1-206ENST00000531405 DDX20Q9UHI6 824 aaKnown RBP22.27■■□□□ 1.16
SSSCA1-206ENST00000531405 CYP2D7A0A087X1C5 515 aa22.26■■□□□ 1.15
SSSCA1-206ENST00000531405 MS4A1P11836 297 aa22.26■■□□□ 1.15
SSSCA1-206ENST00000531405 AKR1B1P15121 316 aa22.26■■□□□ 1.15
SSSCA1-206ENST00000531405 ADD2P35612 726 aa22.26■■□□□ 1.15
SSSCA1-206ENST00000531405 TMEM179Q6ZVK1 233 aa22.26■■□□□ 1.15
SSSCA1-206ENST00000531405 SENP6Q9GZR1 1112 aaPredicted RBP22.26■■□□□ 1.15
SSSCA1-206ENST00000531405 SPATC1LQ9H0A9 340 aa22.26■■□□□ 1.15
SSSCA1-206ENST00000531405 ADORA2AP29274 412 aa22.25■■□□□ 1.15
SSSCA1-206ENST00000531405 MDM2Q00987 491 aaPredicted RBP22.25■■□□□ 1.15
SSSCA1-206ENST00000531405 Q7L0L9 218 aa22.25■■□□□ 1.15
SSSCA1-206ENST00000531405 DPP9Q86TI2 863 aa22.25■■□□□ 1.15
SSSCA1-206ENST00000531405 SIAH1Q8IUQ4 282 aa22.25■■□□□ 1.15
SSSCA1-206ENST00000531405 SPICE1Q8N0Z3 855 aa22.25■■□□□ 1.15
SSSCA1-206ENST00000531405 HOXC10Q9NYD6 342 aa22.25■■□□□ 1.15
SSSCA1-206ENST00000531405 SWAP70Q9UH65 585 aa22.25■■□□□ 1.15
SSSCA1-206ENST00000531405 DDX19BQ9UMR2 479 aa22.25■■□□□ 1.15
SSSCA1-206ENST00000531405 RAB11FIP3O75154 756 aa22.24■■□□□ 1.15
SSSCA1-206ENST00000531405 ERCC3P19447 782 aa22.24■■□□□ 1.15
SSSCA1-206ENST00000531405 LRIT3Q3SXY7 679 aa22.24■■□□□ 1.15
SSSCA1-206ENST00000531405 GREB1LQ9C091 1923 aaPredicted RBP22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 IGHA2P01877 340 aa22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 CYBAP13498 195 aa22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 ATN1P54259 1190 aaPredicted RBP22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 ICA1Q05084 483 aa22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 PLS1Q14651 629 aa22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 SAMD1Q6SPF0 538 aaPredicted RBP22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 DEFB123Q8N688 67 aa22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 SLC17A8Q8NDX2 589 aa22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 LPAR1Q92633 364 aa22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 ATG4CQ96DT6 458 aa22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 MYH4Q9Y623 1939 aa22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 UNC80Q8N2C7 3258 aa22.23■■□□□ 1.15
SSSCA1-206ENST00000531405 MSCO60682 206 aa22.22■■□□□ 1.15
SSSCA1-206ENST00000531405 COBLO75128 1261 aa22.22■■□□□ 1.15
SSSCA1-206ENST00000531405 FLOT1O75955 427 aa22.22■■□□□ 1.15
SSSCA1-206ENST00000531405 ATP5JP18859 108 aa22.22■■□□□ 1.15
SSSCA1-206ENST00000531405 DSG3P32926 999 aa22.22■■□□□ 1.15
SSSCA1-206ENST00000531405 ANO1Q5XXA6 986 aa22.22■■□□□ 1.15
SSSCA1-206ENST00000531405 HAUS7Q99871 368 aa22.22■■□□□ 1.15
SSSCA1-206ENST00000531405 ARHGEF10LQ9HCE6 1279 aa22.22■■□□□ 1.15
SSSCA1-206ENST00000531405 ATP8A2Q9NTI2 1148 aa22.22■■□□□ 1.15
SSSCA1-206ENST00000531405 STRNO43815 780 aa22.21■■□□□ 1.15
SSSCA1-206ENST00000531405 CDK8P49336 464 aa22.21■■□□□ 1.15
SSSCA1-206ENST00000531405 GJC2Q5T442 439 aaPredicted RBP22.21■■□□□ 1.15
SSSCA1-206ENST00000531405 C12orf60Q5U649 245 aa22.21■■□□□ 1.15
SSSCA1-206ENST00000531405 NCAPG2Q86XI2 1143 aa22.21■■□□□ 1.15
SSSCA1-206ENST00000531405 SHCBP1Q8NEM2 672 aa22.21■■□□□ 1.15
SSSCA1-206ENST00000531405 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.21■■□□□ 1.15
SSSCA1-206ENST00000531405 VCPKMTQ9H867 229 aa22.21■■□□□ 1.15
SSSCA1-206ENST00000531405 TMX2Q9Y320 296 aa22.21■■□□□ 1.15
SSSCA1-206ENST00000531405 USP17L12C9JPN9 530 aa22.2■■□□□ 1.14
SSSCA1-206ENST00000531405 USP17L21D6R901 530 aa22.2■■□□□ 1.14
SSSCA1-206ENST00000531405 DNM1LO00429 736 aa22.2■■□□□ 1.14
SSSCA1-206ENST00000531405 OLFML2BQ68BL8 750 aa22.2■■□□□ 1.14
SSSCA1-206ENST00000531405 GPR153Q6NV75 609 aa22.2■■□□□ 1.14
SSSCA1-206ENST00000531405 MB21D1Q8N884 522 aa22.2■■□□□ 1.14
SSSCA1-206ENST00000531405 SMARCA5O60264 1052 aaPredicted RBP22.19■■□□□ 1.14
SSSCA1-206ENST00000531405 PRAMEF19Q5SWL8 479 aa22.19■■□□□ 1.14
SSSCA1-206ENST00000531405 C16orf86Q6ZW13 317 aa22.19■■□□□ 1.14
SSSCA1-206ENST00000531405 SH2D4AQ9H788 454 aa22.19■■□□□ 1.14
SSSCA1-206ENST00000531405 SLC4A4Q9Y6R1 1079 aa22.19■■□□□ 1.14
SSSCA1-206ENST00000531405 CUL9Q8IWT3 2517 aa22.19■■□□□ 1.14
SSSCA1-206ENST00000531405 EEF2P13639 858 aaKnown RBP22.18■■□□□ 1.14
SSSCA1-206ENST00000531405 RTP1P59025 263 aa22.18■■□□□ 1.14
SSSCA1-206ENST00000531405 CCDC17Q96LX7 622 aa22.18■■□□□ 1.14
SSSCA1-206ENST00000531405 PUS7LQ9H0K6 701 aaKnown RBP22.18■■□□□ 1.14
SSSCA1-206ENST00000531405 MROH8Q9H579 483 aa22.18■■□□□ 1.14
SSSCA1-206ENST00000531405 EYSQ5T1H1 3165 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms