RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 PODNQ7Z5L7 613 aa6.53□□□□□ -1.36
PCF11-205ENST00000530906 NCOA7Q8NI08 942 aa6.53□□□□□ -1.36
PCF11-205ENST00000530906 SMARCC2Q8TAQ2 1214 aa6.53□□□□□ -1.36
PCF11-205ENST00000530906 SPOCK3Q9BQ16 436 aa6.53□□□□□ -1.36
PCF11-205ENST00000530906 CFHR5Q9BXR6 569 aa6.53□□□□□ -1.36
PCF11-205ENST00000530906 GNL3LQ9NVN8 582 aaKnown RBP6.53□□□□□ -1.36
PCF11-205ENST00000530906 CFAP45Q9UL16 551 aa6.53□□□□□ -1.36
PCF11-205ENST00000530906 BRPF3Q9ULD4 1205 aa6.53□□□□□ -1.36
PCF11-205ENST00000530906 VPS37CA5D8V6 355 aaPredicted RBP6.52□□□□□ -1.37
PCF11-205ENST00000530906 ZNF213O14771 459 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 MSTNO14793 375 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 GPAA1O43292 621 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 CPA1P15085 419 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 ADORA1P30542 326 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 MCAMP43121 646 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 ZAP70P43403 619 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 PHKA2P46019 1235 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 MAP2K3P46734 347 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 RCAN1P53805 252 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 ST3GAL1Q11201 340 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 TRDNQ13061 729 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 ITPK1Q13572 414 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 UBE4AQ14139 1066 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 WASHC4Q2M389 1173 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 SUSD4Q5VX71 490 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 CCDC102BQ68D86 513 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 CCDC129Q6ZRS4 1044 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 Q6ZUG5 572 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 RALYLQ86SE5 291 aaKnown RBP6.52□□□□□ -1.37
PCF11-205ENST00000530906 USP48Q86UV5 1035 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 GAS2L3Q86XJ1 694 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 OSBP2Q969R2 916 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 TRIM44Q96DX7 344 aaPredicted RBP6.52□□□□□ -1.37
PCF11-205ENST00000530906 TMEM87BQ96K49 555 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 OXCT2Q9BYC2 517 aaPredicted RBP6.52□□□□□ -1.37
PCF11-205ENST00000530906 TSPY26PQ9H489 355 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 CNNM2Q9H8M5 875 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 GPAMQ9HCL2 828 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 TMEM63CQ9P1W3 806 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 NIP7Q9Y221 180 aaKnown RBP eCLIP6.52□□□□□ -1.37
PCF11-205ENST00000530906 CCDC9Q9Y3X0 531 aaKnown RBP6.52□□□□□ -1.37
PCF11-205ENST00000530906 LY75O60449 1722 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 TIAM2Q8IVF5 1701 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 TCHHQ07283 1943 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 A0A1B0GUL6 1792 aa6.52□□□□□ -1.37
PCF11-205ENST00000530906 ZNF804BA4D1E1 1349 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 PNPLA7Q6ZV29 1317 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 BTAF1O14981 1849 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 MYH15Q9Y2K3 1946 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 A0A1B0GTH6 734 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 M0R2C6 588 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 RPS6KA4O75676 772 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 CDKL5O76039 1030 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 CAVIN2O95810 425 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 PROCP04070 461 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 PCP11498 1178 aaKnown RBP6.51□□□□□ -1.37
PCF11-205ENST00000530906 PDE6AP16499 860 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 SNRPNP63162 240 aaKnown RBP6.51□□□□□ -1.37
PCF11-205ENST00000530906 SLC9C2Q5TAH2 1124 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 CPLX2Q6PUV4 134 aaKnown RBP6.51□□□□□ -1.37
PCF11-205ENST00000530906 C1orf229Q6ZS94 237 aaPredicted RBP6.51□□□□□ -1.37
PCF11-205ENST00000530906 STOX1Q6ZVD7 989 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 PHTF2Q8N3S3 785 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 SPATA5Q8NB90 893 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 BRF1Q92994 677 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 KLRG1Q96E93 195 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 NGLY1Q96IV0 654 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 ZNF396Q96N95 335 aaPredicted RBP6.51□□□□□ -1.37
PCF11-205ENST00000530906 ZSCAN10Q96SZ4 725 aaPredicted RBP6.51□□□□□ -1.37
PCF11-205ENST00000530906 SEC62Q99442 399 aaKnown RBP6.51□□□□□ -1.37
PCF11-205ENST00000530906 NACAP1Q9BZK3 213 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 DDX19AQ9NUU7 478 aaKnown RBP6.51□□□□□ -1.37
PCF11-205ENST00000530906 BSDC1Q9NW68 430 aaPredicted RBP6.51□□□□□ -1.37
PCF11-205ENST00000530906 NARFQ9UHQ1 456 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 DUOX1Q9NRD9 1551 aa6.51□□□□□ -1.37
PCF11-205ENST00000530906 SALL1Q9NSC2 1324 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 NID2Q14112 1375 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 TCRBV5S4A2TA0A5A2 114 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 GOLGA6L4A6NEF3 574 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 SHISA8B8ZZ34 492 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 UBAP1LF5GYI3 381 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 H3BQV1 296 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 MYCP01106 439 aaPredicted RBP6.5□□□□□ -1.37
PCF11-205ENST00000530906 FGAP02671 866 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 PHKA1P46020 1223 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 PPP2R5BQ15173 497 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 C4orf17Q53FE4 359 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 GIMAP6Q6P9H5 292 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 BRAPQ7Z569 592 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 ANKRD18AQ8IVF6 992 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 MB21D2Q8IYB1 491 aaPredicted RBP6.5□□□□□ -1.37
PCF11-205ENST00000530906 TMTC2Q8N394 836 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 NECAB1Q8N987 351 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 NSUN7Q8NE18 718 aaKnown RBP6.5□□□□□ -1.37
PCF11-205ENST00000530906 AIDAQ96BJ3 306 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 PDLIM2Q96JY6 352 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 ANKRD2Q9GZV1 360 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 RNF41Q9H4P4 317 aaPredicted RBP6.5□□□□□ -1.37
PCF11-205ENST00000530906 CNPY2Q9Y2B0 182 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 CHD4Q14839 1912 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms