RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 RCSD1Q6JBY9 416 aa19.62■□□□□ 0.73
BRCA2-204ENST00000530893 USP49Q70CQ1 688 aa19.62■□□□□ 0.73
BRCA2-204ENST00000530893 ZNF592Q92610 1267 aa19.62■□□□□ 0.73
BRCA2-204ENST00000530893 PPP1R13BQ96KQ4 1090 aa19.62■□□□□ 0.73
BRCA2-204ENST00000530893 GSDMAQ96QA5 445 aa19.62■□□□□ 0.73
BRCA2-204ENST00000530893 KAT14Q9H8E8 782 aa19.62■□□□□ 0.73
BRCA2-204ENST00000530893 ANKIB1Q9P2G1 1089 aa19.62■□□□□ 0.73
BRCA2-204ENST00000530893 XDHP47989 1333 aa19.62■□□□□ 0.73
BRCA2-204ENST00000530893 hCG_1642624A0A1W2PR95 340 aa19.61■□□□□ 0.73
BRCA2-204ENST00000530893 NMT2O60551 498 aa19.61■□□□□ 0.73
BRCA2-204ENST00000530893 GNAQP50148 359 aa19.61■□□□□ 0.73
BRCA2-204ENST00000530893 NLRP5P59047 1200 aa19.61■□□□□ 0.73
BRCA2-204ENST00000530893 PPP4CP60510 307 aa19.61■□□□□ 0.73
BRCA2-204ENST00000530893 ZNF804AQ7Z570 1209 aa19.61■□□□□ 0.73
BRCA2-204ENST00000530893 FAM177A1Q8N128 213 aaPredicted RBP19.61■□□□□ 0.73
BRCA2-204ENST00000530893 SYMPKQ92797 1274 aaKnown RBP19.61■□□□□ 0.73
BRCA2-204ENST00000530893 TCP11L1Q9NUJ3 509 aa19.61■□□□□ 0.73
BRCA2-204ENST00000530893 LDHCP07864 332 aa19.61■□□□□ 0.73
BRCA2-204ENST00000530893 CYP2D6P10635 497 aa19.61■□□□□ 0.73
BRCA2-204ENST00000530893 PDCL2Q8N4E4 241 aa19.61■□□□□ 0.73
BRCA2-204ENST00000530893 DHX58Q96C10 678 aa19.61■□□□□ 0.73
BRCA2-204ENST00000530893 ADRA2BP18089 450 aa19.6■□□□□ 0.73
BRCA2-204ENST00000530893 CDK11BP21127 795 aaKnown RBP19.6■□□□□ 0.73
BRCA2-204ENST00000530893 USP5P45974 858 aa19.6■□□□□ 0.73
BRCA2-204ENST00000530893 NCBP1Q09161 790 aaKnown RBP19.6■□□□□ 0.73
BRCA2-204ENST00000530893 EPSTI1Q96J88 318 aa19.6■□□□□ 0.73
BRCA2-204ENST00000530893 FMR1Q06787 632 aaKnown RBP eCLIP19.59■□□□□ 0.73
BRCA2-204ENST00000530893 PTGDRQ13258 359 aa19.59■□□□□ 0.73
BRCA2-204ENST00000530893 ARL6IP4Q66PJ3 421 aaKnown RBP19.59■□□□□ 0.73
BRCA2-204ENST00000530893 PAGE5Q96GU1 130 aa19.59■□□□□ 0.73
BRCA2-204ENST00000530893 USP21Q9UK80 565 aa19.59■□□□□ 0.73
BRCA2-204ENST00000530893 USP17L8P0C7I0 530 aa19.59■□□□□ 0.73
BRCA2-204ENST00000530893 TFAP4Q01664 338 aa19.59■□□□□ 0.73
BRCA2-204ENST00000530893 EVX2Q03828 476 aa19.59■□□□□ 0.73
BRCA2-204ENST00000530893 TBX2Q13207 712 aaPredicted RBP19.59■□□□□ 0.73
BRCA2-204ENST00000530893 ZNF174Q15697 407 aa19.59■□□□□ 0.73
BRCA2-204ENST00000530893 GRAMD1CQ8IYS0 662 aa19.59■□□□□ 0.73
BRCA2-204ENST00000530893 CCDC24Q8N4L8 307 aa19.59■□□□□ 0.73
BRCA2-204ENST00000530893 CNBD1Q8NA66 436 aa19.59■□□□□ 0.73
BRCA2-204ENST00000530893 ZNF287Q9HBT7 754 aa19.59■□□□□ 0.73
BRCA2-204ENST00000530893 A0A087X0B3 334 aa19.58■□□□□ 0.73
BRCA2-204ENST00000530893 DPYDQ12882 1025 aa19.58■□□□□ 0.73
BRCA2-204ENST00000530893 SPECC1LQ69YQ0 1117 aa19.58■□□□□ 0.73
BRCA2-204ENST00000530893 AMIGO3Q86WK7 504 aa19.58■□□□□ 0.73
BRCA2-204ENST00000530893 IQUBQ8NA54 791 aa19.58■□□□□ 0.73
BRCA2-204ENST00000530893 PNMA1Q8ND90 353 aa19.58■□□□□ 0.73
BRCA2-204ENST00000530893 INTS13Q9NVM9 706 aa19.58■□□□□ 0.73
BRCA2-204ENST00000530893 SPATA31A6Q5VVP1 1343 aa19.58■□□□□ 0.72
BRCA2-204ENST00000530893 ARHGAP6O43182 974 aa19.58■□□□□ 0.72
BRCA2-204ENST00000530893 NFIXQ14938 502 aa19.58■□□□□ 0.72
BRCA2-204ENST00000530893 GALNT17Q6IS24 598 aa19.58■□□□□ 0.72
BRCA2-204ENST00000530893 MKNK2Q9HBH9 465 aa19.58■□□□□ 0.72
BRCA2-204ENST00000530893 IL17RBQ9NRM6 502 aa19.58■□□□□ 0.72
BRCA2-204ENST00000530893 NAV1Q8NEY1 1877 aa19.57■□□□□ 0.72
BRCA2-204ENST00000530893 VWA3AA6NCI4 1184 aa19.57■□□□□ 0.72
BRCA2-204ENST00000530893 GRM4Q14833 912 aa19.57■□□□□ 0.72
BRCA2-204ENST00000530893 SPATA1Q5VX52 437 aa19.57■□□□□ 0.72
BRCA2-204ENST00000530893 PIK3AP1Q6ZUJ8 805 aa19.57■□□□□ 0.72
BRCA2-204ENST00000530893 TMEM232C9JQI7 657 aa19.56■□□□□ 0.72
BRCA2-204ENST00000530893 ZSCAN12O43309 604 aa19.56■□□□□ 0.72
BRCA2-204ENST00000530893 ZNF827Q17R98 1081 aa19.56■□□□□ 0.72
BRCA2-204ENST00000530893 BLIDQ8IZY5 108 aa19.56■□□□□ 0.72
BRCA2-204ENST00000530893 SH3RF3Q8TEJ3 882 aaPredicted RBP19.56■□□□□ 0.72
BRCA2-204ENST00000530893 ERO1AQ96HE7 468 aa19.56■□□□□ 0.72
BRCA2-204ENST00000530893 L2HGDHQ9H9P8 463 aa19.56■□□□□ 0.72
BRCA2-204ENST00000530893 CGNQ9P2M7 1197 aaKnown RBP19.56■□□□□ 0.72
BRCA2-204ENST00000530893 PCDHA4Q9UN74 947 aa19.56■□□□□ 0.72
BRCA2-204ENST00000530893 WNT7AO00755 349 aa19.56■□□□□ 0.72
BRCA2-204ENST00000530893 LONP1P36776 959 aaKnown RBP19.56■□□□□ 0.72
BRCA2-204ENST00000530893 ZNF444Q8N0Y2 327 aaPredicted RBP19.56■□□□□ 0.72
BRCA2-204ENST00000530893 CCDC148Q8NFR7 591 aa19.56■□□□□ 0.72
BRCA2-204ENST00000530893 CTAGE1Q96RT6 745 aa19.56■□□□□ 0.72
BRCA2-204ENST00000530893 LZTS2Q9BRK4 669 aa19.56■□□□□ 0.72
BRCA2-204ENST00000530893 A0A1B0GTH6 734 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 GOLGA6L9A6NEM1 432 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 STX10O60499 249 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 TSPY3P0CV98 308 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 TSPY8P0CW00 308 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 AFMP43652 599 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 CUL4BQ13620 913 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 NR1I3Q14994 352 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 E2F4Q16254 413 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 DAGLBQ8NCG7 672 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 MED15Q96RN5 788 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 JAG2Q9Y219 1238 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 PHLPP2Q6ZVD8 1323 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 SYNRGQ9UMZ2 1314 aa19.55■□□□□ 0.72
BRCA2-204ENST00000530893 SLU7O95391 586 aaKnown RBP19.54■□□□□ 0.72
BRCA2-204ENST00000530893 ETF1P62495 437 aaKnown RBP19.54■□□□□ 0.72
BRCA2-204ENST00000530893 ATP2B4P23634 1241 aa19.54■□□□□ 0.72
BRCA2-204ENST00000530893 TXLNAP40222 546 aa19.54■□□□□ 0.72
BRCA2-204ENST00000530893 CRY2Q49AN0 593 aa19.54■□□□□ 0.72
BRCA2-204ENST00000530893 NOM1Q5C9Z4 860 aaKnown RBP19.54■□□□□ 0.72
BRCA2-204ENST00000530893 FAM196AQ6ZSG2 479 aa19.54■□□□□ 0.72
BRCA2-204ENST00000530893 TMEM139Q8IV31 216 aa19.54■□□□□ 0.72
BRCA2-204ENST00000530893 TRMT44Q8IYL2 757 aaKnown RBP19.54■□□□□ 0.72
BRCA2-204ENST00000530893 RPGRQ92834 1020 aaKnown RBP19.54■□□□□ 0.72
BRCA2-204ENST00000530893 SAMSN1Q9NSI8 373 aaKnown RBP19.54■□□□□ 0.72
BRCA2-204ENST00000530893 MAD2L2Q9UI95 211 aa19.54■□□□□ 0.72
BRCA2-204ENST00000530893 PLCG2P16885 1265 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms