RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 EARS2Q5JPH6 523 aaKnown RBP13.19□□□□□ -0.3
USP35-207ENST00000530546 RESP18Q5W5W9 173 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 LRRC8AQ8IWT6 810 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 SRBD1Q8N5C6 995 aaKnown RBP13.19□□□□□ -0.3
USP35-207ENST00000530546 GEMIN8Q9NWZ8 242 aaKnown RBP13.19□□□□□ -0.3
USP35-207ENST00000530546 FHOD1Q9Y613 1164 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 ECM29Q5VYK3 1845 aa13.19□□□□□ -0.3
USP35-207ENST00000530546 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 CALM1P0DP23 149 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 CALM2P0DP24 149 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 CALM3P0DP25 149 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 NOM1Q5C9Z4 860 aaKnown RBP13.18□□□□□ -0.3
USP35-207ENST00000530546 TMTC3Q6ZXV5 915 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 PDILTQ8N807 584 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 CNNM3Q8NE01 707 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 RBM28Q9NW13 759 aaKnown RBP13.18□□□□□ -0.3
USP35-207ENST00000530546 HPSEQ9Y251 543 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 USP17L3A6NCW0 530 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 USP17L4A6NCW7 530 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
USP35-207ENST00000530546 DDAH1O94760 285 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 KRT2P35908 639 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 GSTO1P78417 241 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 C12orf60Q5U649 245 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 USP17L1Q7RTZ2 530 aa13.18□□□□□ -0.3
USP35-207ENST00000530546 BAZ2BQ9UIF8 2168 aaKnown RBP13.18□□□□□ -0.3
USP35-207ENST00000530546 FOXN1O15353 648 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
USP35-207ENST00000530546 ATP2B4P23634 1241 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 BTDP43251 543 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 PPP2R5BQ15173 497 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 CCDC144BQ3MJ40 725 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 CRY2Q49AN0 593 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 KAT14Q9H8E8 782 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.17□□□□□ -0.3
USP35-207ENST00000530546 POLLQ9UGP5 575 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 SBF2Q86WG5 1849 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 PLCD1P51178 756 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 NLRP12P59046 1061 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 TXNRD1Q16881 649 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 SLC27A3Q5K4L6 730 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 SARM1Q6SZW1 724 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 AMOTL1Q8IY63 956 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 LDHCP07864 332 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 MFSD14BQ5SR56 506 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 FILIP1Q7Z7B0 1213 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 PROM2Q8N271 834 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 L2HGDHQ9H9P8 463 aa13.17□□□□□ -0.3
USP35-207ENST00000530546 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.3
USP35-207ENST00000530546 FBXO2Q9UK22 296 aaPredicted RBP13.17□□□□□ -0.3
USP35-207ENST00000530546 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
USP35-207ENST00000530546 F8W031 263 aaPredicted RBP13.16□□□□□ -0.3
USP35-207ENST00000530546 POLRMTO00411 1230 aaKnown RBP13.16□□□□□ -0.3
USP35-207ENST00000530546 PNMA6AP0CW24 399 aaPredicted RBP13.16□□□□□ -0.3
USP35-207ENST00000530546 RCSD1Q6JBY9 416 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 OLFM4Q6UX06 510 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 USP49Q70CQ1 688 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 ZNF444Q8N0Y2 327 aaPredicted RBP13.16□□□□□ -0.3
USP35-207ENST00000530546 TBC1D16Q8TBP0 767 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 MRFAP1L1Q96HT8 127 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 PHF20Q9BVI0 1012 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 IL17RBQ9NRM6 502 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 CNTNAP5Q8WYK1 1306 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 TRIM75PA6NK02 468 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 POLR2DO15514 142 aaKnown RBP13.16□□□□□ -0.3
USP35-207ENST00000530546 TUBB4AP04350 444 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 TSPY3P0CV98 308 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 TSPY8P0CW00 308 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 NLRP5P59047 1200 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 GPS2Q13227 327 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 ARID5BQ14865 1188 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 ZNF174Q15697 407 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 KRBA2Q6ZNG9 492 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 METTL16Q86W50 562 aaKnown RBP13.16□□□□□ -0.3
USP35-207ENST00000530546 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 MKRN1Q9UHC7 482 aaKnown RBP13.16□□□□□ -0.3
USP35-207ENST00000530546 STX8Q9UNK0 236 aa13.16□□□□□ -0.3
USP35-207ENST00000530546 WNT7AO00755 349 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 ATP8B1O43520 1251 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 BBOX1O75936 387 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 PTPREP23469 700 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 GRAMD1CQ8IYS0 662 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 RTFDC1Q9BY42 306 aaPredicted RBP13.15□□□□□ -0.3
USP35-207ENST00000530546 CSRNP2Q9H175 543 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 BRMS1Q9HCU9 246 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 ARGLU1Q9NWB6 273 aaPredicted RBP13.15□□□□□ -0.3
USP35-207ENST00000530546 CWC15Q9P013 229 aaKnown RBP13.15□□□□□ -0.3
USP35-207ENST00000530546 RSPH14Q9UHP6 348 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 SMC2O95347 1197 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 GTF2IP78347 998 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 STAG2Q8N3U4 1231 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 PNMA1Q8ND90 353 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 TRERF1Q96PN7 1200 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 SERTAD1Q9UHV2 236 aa13.15□□□□□ -0.3
USP35-207ENST00000530546 ADAMTS3O15072 1205 aa13.14□□□□□ -0.31
USP35-207ENST00000530546 SKILP12757 684 aa13.14□□□□□ -0.31
USP35-207ENST00000530546 LMOD1P29536 600 aaPredicted RBP13.14□□□□□ -0.31
USP35-207ENST00000530546 CLCN6P51797 869 aa13.14□□□□□ -0.31
USP35-207ENST00000530546 FOXP4Q8IVH2 680 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms