RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 TFRCP02786 760 aaKnown RBP16.7■□□□□ 0.26
CTSB-217ENST00000530296 GCLCP48506 637 aaPredicted RBP16.7■□□□□ 0.26
CTSB-217ENST00000530296 FAM110CQ1W6H9 321 aa16.7■□□□□ 0.26
CTSB-217ENST00000530296 UNC93B1Q9H1C4 597 aa16.7■□□□□ 0.26
CTSB-217ENST00000530296 PTPRFP10586 1907 aa16.69■□□□□ 0.26
CTSB-217ENST00000530296 C19orf81C9J6K1 198 aa16.69■□□□□ 0.26
CTSB-217ENST00000530296 ZNF213O14771 459 aa16.69■□□□□ 0.26
CTSB-217ENST00000530296 FOXP2O15409 715 aa16.69■□□□□ 0.26
CTSB-217ENST00000530296 INHAP05111 366 aa16.69■□□□□ 0.26
CTSB-217ENST00000530296 RRP1BQ14684 758 aaKnown RBP16.69■□□□□ 0.26
CTSB-217ENST00000530296 RAB3GAP1Q15042 981 aa16.69■□□□□ 0.26
CTSB-217ENST00000530296 IMMTQ16891 758 aaKnown RBP16.69■□□□□ 0.26
CTSB-217ENST00000530296 PPP4R3BQ5MIZ7 849 aa16.69■□□□□ 0.26
CTSB-217ENST00000530296 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
CTSB-217ENST00000530296 ANKLE1Q8NAG6 615 aa16.69■□□□□ 0.26
CTSB-217ENST00000530296 SLC44A5Q8NCS7 719 aa16.69■□□□□ 0.26
CTSB-217ENST00000530296 RNF41Q9H4P4 317 aaPredicted RBP16.69■□□□□ 0.26
CTSB-217ENST00000530296 PAK6Q9NQU5 681 aaPredicted RBP16.69■□□□□ 0.26
CTSB-217ENST00000530296 GABRQQ9UN88 632 aa16.69■□□□□ 0.26
CTSB-217ENST00000530296 ATAD5Q96QE3 1844 aa16.68■□□□□ 0.26
CTSB-217ENST00000530296 TRIM75PA6NK02 468 aa16.68■□□□□ 0.26
CTSB-217ENST00000530296 SPP2Q13103 211 aa16.68■□□□□ 0.26
CTSB-217ENST00000530296 SH2D4AQ9H788 454 aa16.68■□□□□ 0.26
CTSB-217ENST00000530296 KANSL2Q9H9L4 492 aa16.68■□□□□ 0.26
CTSB-217ENST00000530296 MYH8P13535 1937 aa16.67■□□□□ 0.26
CTSB-217ENST00000530296 USP17L10C9JJH3 530 aa16.67■□□□□ 0.26
CTSB-217ENST00000530296 USP14P54578 494 aa16.67■□□□□ 0.26
CTSB-217ENST00000530296 NECAB2Q7Z6G3 386 aa16.67■□□□□ 0.26
CTSB-217ENST00000530296 FEZ1Q99689 392 aa16.67■□□□□ 0.26
CTSB-217ENST00000530296 ESYT1Q9BSJ8 1104 aa16.67■□□□□ 0.26
CTSB-217ENST00000530296 CRISPLD2Q9H0B8 497 aa16.67■□□□□ 0.26
CTSB-217ENST00000530296 ARHGEF10LQ9HCE6 1279 aa16.67■□□□□ 0.26
CTSB-217ENST00000530296 TMOD4Q9NZQ9 345 aa16.67■□□□□ 0.26
CTSB-217ENST00000530296 U3KPZ7 1027 aaPredicted RBP16.67■□□□□ 0.26
CTSB-217ENST00000530296 RASA1P20936 1047 aa16.66■□□□□ 0.26
CTSB-217ENST00000530296 BACE1P56817 501 aa16.66■□□□□ 0.26
CTSB-217ENST00000530296 EVX2Q03828 476 aa16.66■□□□□ 0.26
CTSB-217ENST00000530296 SH3D19Q5HYK7 790 aa16.66■□□□□ 0.26
CTSB-217ENST00000530296 GPR153Q6NV75 609 aa16.66■□□□□ 0.26
CTSB-217ENST00000530296 DEFB118Q96PH6 123 aa16.66■□□□□ 0.26
CTSB-217ENST00000530296 PHIPQ8WWQ0 1821 aa16.66■□□□□ 0.26
CTSB-217ENST00000530296 ORC4O43929 436 aa16.65■□□□□ 0.26
CTSB-217ENST00000530296 EIF5BO60841 1220 aaKnown RBP16.65■□□□□ 0.26
CTSB-217ENST00000530296 HMGCRP04035 888 aa16.65■□□□□ 0.26
CTSB-217ENST00000530296 FGRP09769 529 aa16.65■□□□□ 0.26
CTSB-217ENST00000530296 TSPY3P0CV98 308 aa16.65■□□□□ 0.26
CTSB-217ENST00000530296 TSPY8P0CW00 308 aa16.65■□□□□ 0.26
CTSB-217ENST00000530296 AKR1B1P15121 316 aa16.65■□□□□ 0.26
CTSB-217ENST00000530296 ELNP15502 786 aa16.65■□□□□ 0.26
CTSB-217ENST00000530296 SEPT2Q15019 361 aa16.65■□□□□ 0.26
CTSB-217ENST00000530296 MFSD6Q6ZSS7 791 aa16.65■□□□□ 0.26
CTSB-217ENST00000530296 STK11IPQ8N1F8 1099 aa16.65■□□□□ 0.26
CTSB-217ENST00000530296 ANKRD13CQ8N6S4 541 aa16.65■□□□□ 0.26
CTSB-217ENST00000530296 KIAA1683Q9H0B3 1180 aa16.65■□□□□ 0.26
CTSB-217ENST00000530296 TSPY2A6NKD2 308 aa16.64■□□□□ 0.25
CTSB-217ENST00000530296 BMP8BP34820 402 aa16.64■□□□□ 0.25
CTSB-217ENST00000530296 JAG1P78504 1218 aa16.64■□□□□ 0.25
CTSB-217ENST00000530296 ICA1Q05084 483 aa16.64■□□□□ 0.25
CTSB-217ENST00000530296 CTDSPL2Q05D32 466 aa16.64■□□□□ 0.25
CTSB-217ENST00000530296 MTMR2Q13614 643 aa16.64■□□□□ 0.25
CTSB-217ENST00000530296 AKNAD1Q5T1N1 836 aa16.64■□□□□ 0.25
CTSB-217ENST00000530296 USP17L2Q6R6M4 530 aa16.64■□□□□ 0.25
CTSB-217ENST00000530296 STAG1Q8WVM7 1258 aa16.64■□□□□ 0.25
CTSB-217ENST00000530296 CNNM2Q9H8M5 875 aa16.64■□□□□ 0.25
CTSB-217ENST00000530296 TOMM22Q9NS69 142 aa16.64■□□□□ 0.25
CTSB-217ENST00000530296 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.64■□□□□ 0.25
CTSB-217ENST00000530296 SYNPO2Q9UMS6 1093 aa16.64■□□□□ 0.25
CTSB-217ENST00000530296 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.64■□□□□ 0.256e-6■■□□□ 13.9
CTSB-217ENST00000530296 SMIM22K7EJ46 135 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 PRDM1O75626 825 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 GUCY1A2P33402 732 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 HMGCS2P54868 508 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 HAND2P61296 217 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 CCDC84Q86UT8 332 aaPredicted RBP16.63■□□□□ 0.25
CTSB-217ENST00000530296 TRMT44Q8IYL2 757 aaKnown RBP16.63■□□□□ 0.25
CTSB-217ENST00000530296 NEDD1Q8NHV4 660 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 ESR2Q92731 530 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 MAP4K1Q92918 833 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.63■□□□□ 0.251e-7■■■□□ 16.2
CTSB-217ENST00000530296 IL25Q9H293 177 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 HMX1Q9NP08 348 aaPredicted RBP16.63■□□□□ 0.25
CTSB-217ENST00000530296 ANO2Q9NQ90 1003 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 DOCK3Q8IZD9 2030 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 RPTORQ8N122 1335 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 PLIN4Q96Q06 1357 aa16.63■□□□□ 0.25
CTSB-217ENST00000530296 RANBP6O60518 1105 aaKnown RBP16.62■□□□□ 0.25
CTSB-217ENST00000530296 REC8O95072 547 aa16.62■□□□□ 0.25
CTSB-217ENST00000530296 TFAP4Q01664 338 aa16.62■□□□□ 0.25
CTSB-217ENST00000530296 TRDNQ13061 729 aa16.62■□□□□ 0.25
CTSB-217ENST00000530296 SHROOM1Q2M3G4 852 aaPredicted RBP16.62■□□□□ 0.25
CTSB-217ENST00000530296 SLC17A8Q8NDX2 589 aa16.62■□□□□ 0.25
CTSB-217ENST00000530296 LPAR1Q92633 364 aa16.62■□□□□ 0.25
CTSB-217ENST00000530296 PAWRQ96IZ0 340 aaKnown RBP16.62■□□□□ 0.25
CTSB-217ENST00000530296 C12orf42Q96LP6 360 aa16.62■□□□□ 0.25
CTSB-217ENST00000530296 KRT23Q9C075 422 aa16.62■□□□□ 0.25
CTSB-217ENST00000530296 NBPF3Q9H094 633 aa16.62■□□□□ 0.25
CTSB-217ENST00000530296 NYAP2Q9P242 653 aa16.62■□□□□ 0.25
CTSB-217ENST00000530296 LOC285556D6RIA3 1793 aa16.61■□□□□ 0.25
CTSB-217ENST00000530296 PTH1RQ03431 593 aa16.61■□□□□ 0.25
CTSB-217ENST00000530296 CCDC178Q5BJE1 867 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms