RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 C20orf194Q5TEA3 1177 aa24.82■■□□□ 1.56
SF3B2-207ENST00000529577 TRMT44Q8IYL2 757 aaKnown RBP24.82■■□□□ 1.56
SF3B2-207ENST00000529577 CRNKL1Q9BZJ0 848 aaKnown RBP24.82■■□□□ 1.56
SF3B2-207ENST00000529577 BOLA2Q9H3K6 86 aa24.82■■□□□ 1.56
SF3B2-207ENST00000529577 MYH7P12883 1935 aa24.82■■□□□ 1.56
SF3B2-207ENST00000529577 SLC15A5A6NIM6 579 aa24.81■■□□□ 1.56
SF3B2-207ENST00000529577 HOXC6P09630 235 aa24.81■■□□□ 1.56
SF3B2-207ENST00000529577 HSP90AB4PQ58FF6 505 aa24.81■■□□□ 1.56
SF3B2-207ENST00000529577 CLASRPQ8N2M8 674 aaKnown RBP24.81■■□□□ 1.56
SF3B2-207ENST00000529577 MOV10L1Q9BXT6 1211 aaKnown RBP24.81■■□□□ 1.56
SF3B2-207ENST00000529577 BCL11AQ9H165 835 aa24.81■■□□□ 1.56
SF3B2-207ENST00000529577 CABP5Q9NP86 173 aa24.81■■□□□ 1.56
SF3B2-207ENST00000529577 MBD4O95243 580 aa24.8■■□□□ 1.56
SF3B2-207ENST00000529577 CYP2C19P33261 490 aa24.8■■□□□ 1.56
SF3B2-207ENST00000529577 COL11A1P12107 1806 aaPredicted RBP24.79■■□□□ 1.56
SF3B2-207ENST00000529577 PAG1Q9NWQ8 432 aa24.79■■□□□ 1.56
SF3B2-207ENST00000529577 MPHOSPH10O00566 681 aaKnown RBP24.78■■□□□ 1.56
SF3B2-207ENST00000529577 COBLO75128 1261 aa24.78■■□□□ 1.56
SF3B2-207ENST00000529577 IFIT2P09913 472 aaKnown RBP24.78■■□□□ 1.56
SF3B2-207ENST00000529577 ATP5JP18859 108 aa24.78■■□□□ 1.56
SF3B2-207ENST00000529577 WDR78Q5VTH9 848 aa24.78■■□□□ 1.56
SF3B2-207ENST00000529577 CCAR1Q8IX12 1150 aaKnown RBP24.78■■□□□ 1.56
SF3B2-207ENST00000529577 GREB1LQ9C091 1923 aaPredicted RBP24.77■■□□□ 1.56
SF3B2-207ENST00000529577 SMARCA5O60264 1052 aaPredicted RBP24.77■■□□□ 1.56
SF3B2-207ENST00000529577 CCNA1P78396 465 aa24.77■■□□□ 1.56
SF3B2-207ENST00000529577 HAUS7Q99871 368 aa24.77■■□□□ 1.56
SF3B2-207ENST00000529577 DDX19BQ9UMR2 479 aa24.77■■□□□ 1.56
SF3B2-207ENST00000529577 CYBAP13498 195 aa24.76■■□□□ 1.55
SF3B2-207ENST00000529577 COG2Q14746 738 aa24.76■■□□□ 1.55
SF3B2-207ENST00000529577 C12orf60Q5U649 245 aa24.76■■□□□ 1.55
SF3B2-207ENST00000529577 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.76■■□□□ 1.55
SF3B2-207ENST00000529577 SPATC1LQ9H0A9 340 aa24.76■■□□□ 1.55
SF3B2-207ENST00000529577 DDX20Q9UHI6 824 aaKnown RBP24.76■■□□□ 1.55
SF3B2-207ENST00000529577 LTBP2Q14767 1821 aa24.75■■□□□ 1.55
SF3B2-207ENST00000529577 RAB11FIP3O75154 756 aa24.75■■□□□ 1.55
SF3B2-207ENST00000529577 DSG3P32926 999 aa24.75■■□□□ 1.55
SF3B2-207ENST00000529577 TMEM179Q6ZVK1 233 aa24.75■■□□□ 1.55
SF3B2-207ENST00000529577 Q7L0L9 218 aa24.75■■□□□ 1.55
SF3B2-207ENST00000529577 SPICE1Q8N0Z3 855 aa24.75■■□□□ 1.55
SF3B2-207ENST00000529577 ATG4CQ96DT6 458 aa24.75■■□□□ 1.55
SF3B2-207ENST00000529577 PUS7LQ9H0K6 701 aaKnown RBP24.75■■□□□ 1.55
SF3B2-207ENST00000529577 TMX2Q9Y320 296 aa24.75■■□□□ 1.55
SF3B2-207ENST00000529577 ZNFX1Q9P2E3 1918 aaKnown RBP24.74■■□□□ 1.55
SF3B2-207ENST00000529577 ERCC3P19447 782 aa24.74■■□□□ 1.55
SF3B2-207ENST00000529577 ADORA2AP29274 412 aa24.74■■□□□ 1.55
SF3B2-207ENST00000529577 CDK8P49336 464 aa24.74■■□□□ 1.55
SF3B2-207ENST00000529577 USP17L12C9JPN9 530 aa24.73■■□□□ 1.55
SF3B2-207ENST00000529577 USP17L21D6R901 530 aa24.73■■□□□ 1.55
SF3B2-207ENST00000529577 PRAMEF19Q5SWL8 479 aa24.73■■□□□ 1.55
SF3B2-207ENST00000529577 MFSD14CQ5VZR4 134 aa24.73■■□□□ 1.55
SF3B2-207ENST00000529577 TANGO6Q9C0B7 1094 aa24.73■■□□□ 1.55
SF3B2-207ENST00000529577 GLRX3O76003 335 aaKnown RBP24.72■■□□□ 1.55
SF3B2-207ENST00000529577 ATP2B2Q01814 1243 aa24.72■■□□□ 1.55
SF3B2-207ENST00000529577 LRIT3Q3SXY7 679 aa24.72■■□□□ 1.55
SF3B2-207ENST00000529577 ANO1Q5XXA6 986 aa24.72■■□□□ 1.55
SF3B2-207ENST00000529577 CTR9Q6PD62 1173 aa24.72■■□□□ 1.55
SF3B2-207ENST00000529577 C16orf86Q6ZW13 317 aa24.72■■□□□ 1.55
SF3B2-207ENST00000529577 TDHQ8IZJ6 230 aa24.72■■□□□ 1.55
SF3B2-207ENST00000529577 SENP6Q9GZR1 1112 aaPredicted RBP24.72■■□□□ 1.55
SF3B2-207ENST00000529577 VCPKMTQ9H867 229 aa24.72■■□□□ 1.55
SF3B2-207ENST00000529577 CWC22Q9HCG8 908 aaKnown RBP24.72■■□□□ 1.55
SF3B2-207ENST00000529577 ATP8A2Q9NTI2 1148 aa24.72■■□□□ 1.55
SF3B2-207ENST00000529577 FBXO28Q9NVF7 368 aa24.72■■□□□ 1.55
SF3B2-207ENST00000529577 HOXC10Q9NYD6 342 aa24.72■■□□□ 1.55
SF3B2-207ENST00000529577 SWAP70Q9UH65 585 aa24.72■■□□□ 1.55
SF3B2-207ENST00000529577 A0A0C4DFX4 3053 aa24.71■■□□□ 1.55
SF3B2-207ENST00000529577 HMMRO75330 724 aa24.71■■□□□ 1.55
SF3B2-207ENST00000529577 MDM2Q00987 491 aaPredicted RBP24.71■■□□□ 1.55
SF3B2-207ENST00000529577 ICA1Q05084 483 aa24.71■■□□□ 1.55
SF3B2-207ENST00000529577 TMEM132BQ14DG7 1078 aa24.71■■□□□ 1.55
SF3B2-207ENST00000529577 UBE3CQ15386 1083 aa24.71■■□□□ 1.55
SF3B2-207ENST00000529577 SHCBP1Q8NEM2 672 aa24.71■■□□□ 1.55
SF3B2-207ENST00000529577 LPAR1Q92633 364 aa24.71■■□□□ 1.55
SF3B2-207ENST00000529577 ADAMTS5Q9UNA0 930 aa24.71■■□□□ 1.55
SF3B2-207ENST00000529577 CNGA1P29973 690 aa24.7■■□□□ 1.54
SF3B2-207ENST00000529577 GJC2Q5T442 439 aaPredicted RBP24.7■■□□□ 1.54
SF3B2-207ENST00000529577 OLFML2BQ68BL8 750 aa24.7■■□□□ 1.54
SF3B2-207ENST00000529577 UBE2OQ9C0C9 1292 aaKnown RBP24.7■■□□□ 1.54
SF3B2-207ENST00000529577 IVNS1ABPQ9Y6Y0 642 aa24.7■■□□□ 1.54
SF3B2-207ENST00000529577 MS4A1P11836 297 aa24.69■■□□□ 1.54
SF3B2-207ENST00000529577 EEF2P13639 858 aaKnown RBP24.69■■□□□ 1.54
SF3B2-207ENST00000529577 ATN1P54259 1190 aaPredicted RBP24.69■■□□□ 1.54
SF3B2-207ENST00000529577 REPS2Q8NFH8 660 aa24.69■■□□□ 1.54
SF3B2-207ENST00000529577 RCAN3Q9UKA8 241 aa24.69■■□□□ 1.54
SF3B2-207ENST00000529577 EYSQ5T1H1 3165 aa24.68■■□□□ 1.54
SF3B2-207ENST00000529577 FLOT1O75955 427 aa24.68■■□□□ 1.54
SF3B2-207ENST00000529577 SLC4A4Q9Y6R1 1079 aa24.68■■□□□ 1.54
SF3B2-207ENST00000529577 UNC80Q8N2C7 3258 aa24.67■■□□□ 1.54
SF3B2-207ENST00000529577 PLXNA1Q9UIW2 1896 aa24.67■■□□□ 1.54
SF3B2-207ENST00000529577 DNM1LO00429 736 aa24.67■■□□□ 1.54
SF3B2-207ENST00000529577 STRNO43815 780 aa24.67■■□□□ 1.54
SF3B2-207ENST00000529577 TSHZ3Q63HK5 1081 aa24.67■■□□□ 1.54
SF3B2-207ENST00000529577 DPP9Q86TI2 863 aa24.67■■□□□ 1.54
SF3B2-207ENST00000529577 MAML3Q96JK9 1138 aa24.67■■□□□ 1.54
SF3B2-207ENST00000529577 STRBPQ96SI9 672 aaKnown RBP24.67■■□□□ 1.54
SF3B2-207ENST00000529577 SMCHD1A6NHR9 2005 aa24.67■■□□□ 1.54
SF3B2-207ENST00000529577 NCAPG2Q86XI2 1143 aa24.66■■□□□ 1.54
SF3B2-207ENST00000529577 DEFB123Q8N688 67 aa24.66■■□□□ 1.54
SF3B2-207ENST00000529577 GSG1L2A8MUP6 293 aa24.65■■□□□ 1.54
SF3B2-207ENST00000529577 WDR46O15213 610 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms