RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 MDM2Q00987 491 aaPredicted RBP7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 MFSD14CQ5VZR4 134 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 MIGA1Q8NAN2 632 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 NPLOC4Q8TAT6 608 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 ACER1Q8TDN7 264 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 FRAT1Q92837 279 aaPredicted RBP7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 EAF2Q96CJ1 260 aaPredicted RBP7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 SENP6Q9GZR1 1112 aaPredicted RBP7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 KIAA1683Q9H0B3 1180 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 CCDC8Q9H0W5 538 aaPredicted RBP7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 EHD4Q9H223 541 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 BTBD7Q9P203 1132 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 SERPINB13Q9UIV8 391 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 DBNLQ9UJU6 430 aaKnown RBP7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 NDUFB9Q9Y6M9 179 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 GLRX3O76003 335 aaKnown RBP7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 VCAM1P19320 739 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 SHMT1P34896 483 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 USP5P45974 858 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 PLCD1P51178 756 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 USP14P54578 494 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 ATP2B2Q01814 1243 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 OS9Q13438 667 aaPredicted RBP7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 GRB14Q14449 540 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 RAB3GAP1Q15042 981 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 ZYXQ15942 572 aaKnown RBP7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 ABCB5Q2M3G0 1257 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 CERKLQ49MI3 558 aaPredicted RBP7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 FAM109BQ6ICB4 259 aaPredicted RBP7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 TTC6Q86TZ1 520 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 CERS3Q8IU89 383 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 MAGEB6Q8N7X4 407 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 TRPV1Q8NER1 839 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 LPAR1Q92633 364 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 ANTXR1Q9H6X2 564 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 TLR7Q9NYK1 1049 aaKnown RBP7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 DDX20Q9UHI6 824 aaKnown RBP7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 RLFQ13129 1914 aa7.54□□□□□ -1.2
CHRNA6-202ENST00000529467 SPDYE16A6NNV3 312 aaPredicted RBP7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 MSCO60682 206 aa7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 IDH1O75874 414 aaKnown RBP7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 CYP2C19P33261 490 aa7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 GABPAQ06546 454 aa7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 WDR78Q5VTH9 848 aa7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 ZKSCAN2Q63HK3 967 aa7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 TMED8Q6PL24 325 aaPredicted RBP7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 GUCD1Q96NT3 240 aa7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 FEZ1Q99689 392 aa7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 RIOK1Q9BRS2 568 aaKnown RBP7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 RPAP3Q9H6T3 665 aaPredicted RBP7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 C1orf115Q9H7X2 142 aa7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 CWC22Q9HCG8 908 aaKnown RBP7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 CABP5Q9NP86 173 aa7.53□□□□□ -1.2
CHRNA6-202ENST00000529467 A0A1W2PRG0 241 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 DNM1LO00429 736 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 STRNO43815 780 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 SEC24BO95487 1268 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 CYBAP13498 195 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 CNGA1P29973 690 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 RTP1P59025 263 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 MAP3K12Q12852 859 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 COG2Q14746 738 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 SEPT2Q15019 361 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 GJC2Q5T442 439 aaPredicted RBP7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 OLFML2BQ68BL8 750 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 SLC39A5Q6ZMH5 540 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 LBHD1Q9BQE6 289 aaPredicted RBP7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 COL25A1Q9BXS0 654 aaPredicted RBP7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 MOV10L1Q9BXT6 1211 aaKnown RBP7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 HOXC10Q9NYD6 342 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 IVNS1ABPQ9Y6Y0 642 aa7.52□□□□□ -1.21
CHRNA6-202ENST00000529467 LTBP2Q14767 1821 aa7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 COBLO75128 1261 aa7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 POLR3DP05423 398 aaPredicted RBP7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 RLBP1P12271 317 aa7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 ADORA2AP29274 412 aa7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 IRX5P78411 483 aaPredicted RBP7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 SNX17Q15036 470 aa7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 SHHQ15465 462 aa7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 KIAA1755Q5JYT7 1200 aa7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 DPP9Q86TI2 863 aa7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 SIAH1Q8IUQ4 282 aa7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 ARRDC4Q8NCT1 418 aa7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 SHCBP1Q8NEM2 672 aa7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 SPATC1LQ9H0A9 340 aa7.51□□□□□ -1.21
CHRNA6-202ENST00000529467 MAGEB6P1A0A0J9YX57 407 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 SEPT4O43236 478 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 ERCC3P19447 782 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 PRAMEF19Q5SWL8 479 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 C1orf53Q5VUE5 145 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 ANO1Q5XXA6 986 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 CEP85Q6P2H3 762 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 AACSQ86V21 672 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 FAM161BQ96MY7 647 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 SEMA6BQ9H3T3 888 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 PRKAG2Q9UGJ0 569 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 EXOC6BQ9Y2D4 811 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 ATP11BQ9Y2G3 1177 aa7.5□□□□□ -1.21
CHRNA6-202ENST00000529467 A0A0C4DFX4 3053 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms