RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 SUPT20HQ8NEM7 779 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 TGFBRAP1Q8WUH2 860 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 USP28Q96RU2 1077 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 SH3GL3Q99963 347 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 VPS16Q9H269 839 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 VPS54Q9P1Q0 977 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 FRMD4BQ9Y2L6 1034 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 NR1I2O75469 434 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 TFAP4Q01664 338 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 ARID5AQ03989 594 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 CHRNDQ07001 517 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 PNOCQ13519 176 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 TMTC1Q8IUR5 882 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 JDP2Q8WYK2 163 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 RNF216Q9NWF9 866 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-218ENST00000528232 NFE2L3Q9Y4A8 694 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 PHACTR2O75167 634 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 PPFIA4O75335 1185 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 PSMD7P51665 324 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 GALNT17Q6IS24 598 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 CABP7Q86V35 215 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 FANCBQ8NB91 859 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 NELFBQ8WX92 580 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 CAPZA3Q96KX2 299 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 SMC6Q96SB8 1091 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 IMPG2Q9BZV3 1241 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 LRWD1Q9UFC0 647 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 SERTAD1Q9UHV2 236 aa8.02□□□□□ -1.13
CTNND1-218ENST00000528232 A0A1W2PQ27 194 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 A0A1W2PQ64 194 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 A0A1W2PQD8 194 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 PRAMEF22A3QJZ6 481 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 LRRD1A4D1F6 860 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 M0R2C6 588 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 CD2BP2O95400 341 aaKnown RBP8.01□□□□□ -1.13
CTNND1-218ENST00000528232 TXKP42681 527 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 CALCRLQ16602 461 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 MAPKAPK5Q8IW41 473 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 CNPY4Q8N129 248 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 TRIML1Q8N9V2 468 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 PI4K2BQ8TCG2 481 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.01□□□□□ -1.13
CTNND1-218ENST00000528232 GBP5Q96PP8 586 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 PTPRMP28827 1452 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 MYO3AQ8NEV4 1616 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 U2AF2P26368 475 aaKnown RBP eCLIP8.01□□□□□ -1.131e-10■■□□□ 14
CTNND1-218ENST00000528232 BCAMP50895 628 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 TNNC1P63316 161 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 DYNC1I2Q13409 638 aaKnown RBP8.01□□□□□ -1.13
CTNND1-218ENST00000528232 BRD3Q15059 726 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 HSP90AA5PQ58FG0 334 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 CPLX4Q7Z7G2 160 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 ARHGAP24Q8N264 748 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 PPP1R14CQ8TAE6 165 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 PUS3Q9BZE2 481 aaKnown RBP8.01□□□□□ -1.13
CTNND1-218ENST00000528232 RTEL1Q9NZ71 1219 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 IKBKGQ9Y6K9 419 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 A0A1W2PRG0 241 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 CASQ2O14958 399 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-218ENST00000528232 ATP2C2O75185 946 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 ATP2B4P23634 1241 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 ADORA1P30542 326 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 ALDH1B1P30837 517 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 CHMP4BP1P59074 171 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 PPP2R5AQ15172 486 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 FAM47AQ5JRC9 791 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 CCDC51Q96ER9 411 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 FERMT1Q9BQL6 677 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 ARHGEF40Q8TER5 1519 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 CARMIL3Q8ND23 1372 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 TNKSO95271 1327 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 NDUFAB1O14561 156 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 RIOK3O14730 519 aaKnown RBP8.01□□□□□ -1.13
CTNND1-218ENST00000528232 POLD1P28340 1107 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 CRKLP46109 303 aaKnown RBP8.01□□□□□ -1.13
CTNND1-218ENST00000528232 EVCP57679 992 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 RBM6P78332 1123 aaKnown RBP8.01□□□□□ -1.13
CTNND1-218ENST00000528232 IRX4P78413 519 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 PPFIA1Q13136 1202 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 ZNF589Q86UQ0 364 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-218ENST00000528232 FCHSD1Q86WN1 690 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 TBC1D31Q96DN5 1066 aa8.01□□□□□ -1.13
CTNND1-218ENST00000528232 ZFP91Q96JP5 570 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-218ENST00000528232 CDC25BP30305 580 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 SATB1Q01826 763 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 SNX29Q8TEQ0 813 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 STMN2Q93045 179 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 RMDN2Q96LZ7 410 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 NCAPGQ9BPX3 1015 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 USP21Q9UK80 565 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 PIK3C2BO00750 1634 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 ERVV-1B6SEH8 477 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 USP17L12C9JPN9 530 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 USP17L21D6R901 530 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 ALDH3A1P30838 453 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 MXRA7P84157 204 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 PTPN12Q05209 780 aaKnown RBP8□□□□□ -1.13
CTNND1-218ENST00000528232 DCAF17Q5H9S7 520 aaPredicted RBP8□□□□□ -1.13
CTNND1-218ENST00000528232 JAKMIP2Q96AA8 810 aa8□□□□□ -1.13
CTNND1-218ENST00000528232 PCDHA7Q9UN72 937 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms