RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 FGAP02671 866 aa20.06■□□□□ 0.8
NR1H3-229ENST00000527464 ZNF589Q86UQ0 364 aaPredicted RBP20.06■□□□□ 0.8
NR1H3-229ENST00000527464 CLEC10AQ8IUN9 316 aa20.06■□□□□ 0.8
NR1H3-229ENST00000527464 RAET1EQ8TD07 263 aa20.06■□□□□ 0.8
NR1H3-229ENST00000527464 GOPCQ9HD26 462 aa20.06■□□□□ 0.8
NR1H3-229ENST00000527464 HOXC10Q9NYD6 342 aa20.06■□□□□ 0.8
NR1H3-229ENST00000527464 SYNPO2Q9UMS6 1093 aa20.06■□□□□ 0.8
NR1H3-229ENST00000527464 PLIN4Q96Q06 1357 aa20.06■□□□□ 0.8
NR1H3-229ENST00000527464 IGKV6D-41A0A0C4DH26 115 aa20.05■□□□□ 0.8
NR1H3-229ENST00000527464 WDR46O15213 610 aaKnown RBP20.05■□□□□ 0.8
NR1H3-229ENST00000527464 PRDM1O75626 825 aa20.05■□□□□ 0.8
NR1H3-229ENST00000527464 ECM2O94769 699 aaPredicted RBP20.05■□□□□ 0.8
NR1H3-229ENST00000527464 ERVK-9P63128 1117 aa20.05■□□□□ 0.8
NR1H3-229ENST00000527464 ERVK-24P63145 666 aa20.05■□□□□ 0.8
NR1H3-229ENST00000527464 ATP2B2Q01814 1243 aa20.05■□□□□ 0.8
NR1H3-229ENST00000527464 PRKCZQ05513 592 aa20.05■□□□□ 0.8
NR1H3-229ENST00000527464 IRF5Q13568 498 aa20.05■□□□□ 0.8
NR1H3-229ENST00000527464 COG2Q14746 738 aa20.05■□□□□ 0.8
NR1H3-229ENST00000527464 PPP4R3BQ5MIZ7 849 aa20.05■□□□□ 0.8
NR1H3-229ENST00000527464 NEDD1Q8NHV4 660 aa20.05■□□□□ 0.8
NR1H3-229ENST00000527464 ZNF333Q96JL9 665 aa20.05■□□□□ 0.8
NR1H3-229ENST00000527464 TXNRD2Q9NNW7 524 aa20.05■□□□□ 0.8
NR1H3-229ENST00000527464 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.05■□□□□ 0.8
NR1H3-229ENST00000527464 TSPY3P0CV98 308 aa20.04■□□□□ 0.8
NR1H3-229ENST00000527464 TSPY8P0CW00 308 aa20.04■□□□□ 0.8
NR1H3-229ENST00000527464 GSPT1P15170 499 aaKnown RBP20.04■□□□□ 0.8
NR1H3-229ENST00000527464 CWC27Q6UX04 472 aaKnown RBP20.04■□□□□ 0.8
NR1H3-229ENST00000527464 CENPQQ7L2Z9 268 aaPredicted RBP20.04■□□□□ 0.8
NR1H3-229ENST00000527464 TANGO6Q9C0B7 1094 aa20.04■□□□□ 0.8
NR1H3-229ENST00000527464 SPDYE16A6NNV3 312 aaPredicted RBP20.03■□□□□ 0.8
NR1H3-229ENST00000527464 ORC4O43929 436 aa20.03■□□□□ 0.8
NR1H3-229ENST00000527464 FGRP09769 529 aa20.03■□□□□ 0.8
NR1H3-229ENST00000527464 PCP11498 1178 aaKnown RBP20.03■□□□□ 0.8
NR1H3-229ENST00000527464 MAPK4P31152 587 aa20.03■□□□□ 0.8
NR1H3-229ENST00000527464 GRK4P32298 578 aa20.03■□□□□ 0.8
NR1H3-229ENST00000527464 FLT3LGP49771 235 aa20.03■□□□□ 0.8
NR1H3-229ENST00000527464 CCNA1P78396 465 aa20.03■□□□□ 0.8
NR1H3-229ENST00000527464 KIAA1755Q5JYT7 1200 aa20.03■□□□□ 0.8
NR1H3-229ENST00000527464 MB21D1Q8N884 522 aa20.03■□□□□ 0.8
NR1H3-229ENST00000527464 SLAIN1Q8ND83 568 aa20.03■□□□□ 0.8
NR1H3-229ENST00000527464 MKL1Q969V6 931 aa20.03■□□□□ 0.8
NR1H3-229ENST00000527464 PAGR1Q9BTK6 254 aa20.03■□□□□ 0.8
NR1H3-229ENST00000527464 MTMR4Q9NYA4 1195 aa20.03■□□□□ 0.8
NR1H3-229ENST00000527464 RLFQ13129 1914 aa20.02■□□□□ 0.8
NR1H3-229ENST00000527464 MYH4Q9Y623 1939 aa20.02■□□□□ 0.8
NR1H3-229ENST00000527464 SOX10P56693 466 aa20.02■□□□□ 0.8
NR1H3-229ENST00000527464 TFAP4Q01664 338 aa20.02■□□□□ 0.8
NR1H3-229ENST00000527464 CTDSPL2Q05D32 466 aa20.02■□□□□ 0.8
NR1H3-229ENST00000527464 POTEEQ6S8J3 1075 aa20.02■□□□□ 0.8
NR1H3-229ENST00000527464 CCAR1Q8IX12 1150 aaKnown RBP20.02■□□□□ 0.8
NR1H3-229ENST00000527464 SPICE1Q8N0Z3 855 aa20.02■□□□□ 0.8
NR1H3-229ENST00000527464 PXYLP1Q8TE99 480 aa20.02■□□□□ 0.8
NR1H3-229ENST00000527464 GABRQQ9UN88 632 aa20.02■□□□□ 0.8
NR1H3-229ENST00000527464 CENPFP49454 3210 aa20.01■□□□□ 0.79
NR1H3-229ENST00000527464 CNMDO75829 334 aa20.01■□□□□ 0.79
NR1H3-229ENST00000527464 TTLL1O95922 423 aa20.01■□□□□ 0.79
NR1H3-229ENST00000527464 DSG3P32926 999 aa20.01■□□□□ 0.79
NR1H3-229ENST00000527464 Q3C1V9 767 aa20.01■□□□□ 0.79
NR1H3-229ENST00000527464 CEP95Q96GE4 821 aa20.01■□□□□ 0.79
NR1H3-229ENST00000527464 DSCC1Q9BVC3 393 aa20.01■□□□□ 0.79
NR1H3-229ENST00000527464 CLIP2Q9UDT6 1046 aa20.01■□□□□ 0.79
NR1H3-229ENST00000527464 RAD50Q92878 1312 aa20.01■□□□□ 0.79
NR1H3-229ENST00000527464 TSPY2A6NKD2 308 aa20■□□□□ 0.79
NR1H3-229ENST00000527464 ADCY3O60266 1144 aa20■□□□□ 0.79
NR1H3-229ENST00000527464 FLOT1O75955 427 aa20■□□□□ 0.79
NR1H3-229ENST00000527464 NT5C2P49902 561 aa20■□□□□ 0.79
NR1H3-229ENST00000527464 SH3TC2Q8TF17 1288 aa20■□□□□ 0.79
NR1H3-229ENST00000527464 RUFY2Q8WXA3 655 aa20■□□□□ 0.79
NR1H3-229ENST00000527464 SOCS4Q8WXH5 440 aa20■□□□□ 0.79
NR1H3-229ENST00000527464 TMEM106CQ9BVX2 250 aa20■□□□□ 0.79
NR1H3-229ENST00000527464 GJD2Q9UKL4 321 aa20■□□□□ 0.79
NR1H3-229ENST00000527464 RBBP6Q7Z6E9 1792 aaKnown RBP20■□□□□ 0.79
NR1H3-229ENST00000527464 F5H6K3 240 aa19.99■□□□□ 0.79
NR1H3-229ENST00000527464 KLRC3Q07444 240 aa19.99■□□□□ 0.79
NR1H3-229ENST00000527464 FAM47AQ5JRC9 791 aa19.99■□□□□ 0.79
NR1H3-229ENST00000527464 GMCL1P1Q8NEA9 526 aa19.99■□□□□ 0.79
NR1H3-229ENST00000527464 RNF41Q9H4P4 317 aaPredicted RBP19.99■□□□□ 0.79
NR1H3-229ENST00000527464 BTBD7Q9P203 1132 aa19.99■□□□□ 0.79
NR1H3-229ENST00000527464 PARP14Q460N5 1801 aa19.99■□□□□ 0.79
NR1H3-229ENST00000527464 RANBP6O60518 1105 aaKnown RBP19.98■□□□□ 0.79
NR1H3-229ENST00000527464 PEX10O60683 326 aa19.98■□□□□ 0.79
NR1H3-229ENST00000527464 UBXN2AP68543 259 aa19.98■□□□□ 0.79
NR1H3-229ENST00000527464 PLEKHH3Q7Z736 793 aa19.98■□□□□ 0.79
NR1H3-229ENST00000527464 NUDT12Q9BQG2 462 aa19.98■□□□□ 0.79
NR1H3-229ENST00000527464 PORCNQ9H237 461 aa19.98■□□□□ 0.79
NR1H3-229ENST00000527464 CTNNA3Q9UI47 895 aa19.98■□□□□ 0.79
NR1H3-229ENST00000527464 ADAMTS5Q9UNA0 930 aa19.98■□□□□ 0.79
NR1H3-229ENST00000527464 PDE4DIPQ5VU43 2346 aa19.97■□□□□ 0.79
NR1H3-229ENST00000527464 A0A0G2JMZ2 1700 aa19.97■□□□□ 0.79
NR1H3-229ENST00000527464 ZNF213O14771 459 aa19.97■□□□□ 0.79
NR1H3-229ENST00000527464 RAD21O60216 631 aa19.97■□□□□ 0.79
NR1H3-229ENST00000527464 NDUFB10O96000 172 aa19.97■□□□□ 0.79
NR1H3-229ENST00000527464 CHMLP26374 656 aa19.97■□□□□ 0.79
NR1H3-229ENST00000527464 MLLT1Q03111 559 aaPredicted RBP19.97■□□□□ 0.79
NR1H3-229ENST00000527464 AKNAD1Q5T1N1 836 aa19.97■□□□□ 0.79
NR1H3-229ENST00000527464 MFSD6Q6ZSS7 791 aa19.97■□□□□ 0.79
NR1H3-229ENST00000527464 GPR142Q7Z601 462 aa19.97■□□□□ 0.79
NR1H3-229ENST00000527464 SHCBP1Q8NEM2 672 aa19.97■□□□□ 0.79
NR1H3-229ENST00000527464 STAG1Q8WVM7 1258 aa19.97■□□□□ 0.79
NR1H3-229ENST00000527464 CWC22Q9HCG8 908 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms