RNA–Protein interactions for RNA: ENST00000526960.1

PTP4A2-209, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-209ENST00000526960 SEPT4O43236 478 aa17.49■□□□□ 0.39
PTP4A2-209ENST00000526960 POLR3DP05423 398 aaPredicted RBP17.49■□□□□ 0.39
PTP4A2-209ENST00000526960 SEPT2Q15019 361 aa17.49■□□□□ 0.39
PTP4A2-209ENST00000526960 SNX17Q15036 470 aa17.49■□□□□ 0.39
PTP4A2-209ENST00000526960 SLC39A5Q6ZMH5 540 aa17.49■□□□□ 0.39
PTP4A2-209ENST00000526960 SPATC1LQ9H0A9 340 aa17.49■□□□□ 0.39
PTP4A2-209ENST00000526960 MROH8Q9H579 483 aa17.49■□□□□ 0.39
PTP4A2-209ENST00000526960 PRKAG2Q9UGJ0 569 aa17.49■□□□□ 0.39
PTP4A2-209ENST00000526960 MAGEB6P1A0A0J9YX57 407 aa17.48■□□□□ 0.39
PTP4A2-209ENST00000526960 ADORA2AP29274 412 aa17.48■□□□□ 0.39
PTP4A2-209ENST00000526960 RTP1P59025 263 aa17.48■□□□□ 0.39
PTP4A2-209ENST00000526960 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.48■□□□□ 0.39
PTP4A2-209ENST00000526960 GUCD1Q96NT3 240 aa17.48■□□□□ 0.39
PTP4A2-209ENST00000526960 NRBP1Q9UHY1 535 aa17.48■□□□□ 0.39
PTP4A2-209ENST00000526960 DSG3P32926 999 aa17.47■□□□□ 0.39
PTP4A2-209ENST00000526960 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
PTP4A2-209ENST00000526960 CRNKL1Q9BZJ0 848 aaKnown RBP17.47■□□□□ 0.39
PTP4A2-209ENST00000526960 C1orf115Q9H7X2 142 aa17.47■□□□□ 0.39
PTP4A2-209ENST00000526960 SWAP70Q9UH65 585 aa17.47■□□□□ 0.39
PTP4A2-209ENST00000526960 COBLO75128 1261 aa17.46■□□□□ 0.39
PTP4A2-209ENST00000526960 ERCC3P19447 782 aa17.46■□□□□ 0.39
PTP4A2-209ENST00000526960 ATN1P54259 1190 aaPredicted RBP17.46■□□□□ 0.39
PTP4A2-209ENST00000526960 GJC2Q5T442 439 aaPredicted RBP17.46■□□□□ 0.39
PTP4A2-209ENST00000526960 SLC9C2Q5TAH2 1124 aa17.46■□□□□ 0.39
PTP4A2-209ENST00000526960 CEP85Q6P2H3 762 aa17.46■□□□□ 0.39
PTP4A2-209ENST00000526960 TMEM179Q6ZVK1 233 aa17.46■□□□□ 0.39
PTP4A2-209ENST00000526960 SIAH1Q8IUQ4 282 aa17.46■□□□□ 0.39
PTP4A2-209ENST00000526960 MCM9Q9NXL9 1143 aa17.46■□□□□ 0.39
PTP4A2-209ENST00000526960 KBTBD13C9JR72 458 aa17.45■□□□□ 0.38
PTP4A2-209ENST00000526960 PDE6AP16499 860 aa17.45■□□□□ 0.38
PTP4A2-209ENST00000526960 AACSQ86V21 672 aa17.45■□□□□ 0.38
PTP4A2-209ENST00000526960 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.45■□□□□ 0.38
PTP4A2-209ENST00000526960 FTSJ3Q8IY81 847 aaKnown RBP17.45■□□□□ 0.38
PTP4A2-209ENST00000526960 COL25A1Q9BXS0 654 aaPredicted RBP17.45■□□□□ 0.38
PTP4A2-209ENST00000526960 DCP1AQ9NPI6 582 aaPredicted RBP17.45■□□□□ 0.38
PTP4A2-209ENST00000526960 ADAMTS5Q9UNA0 930 aa17.45■□□□□ 0.38
PTP4A2-209ENST00000526960 TMX2Q9Y320 296 aa17.45■□□□□ 0.38
PTP4A2-209ENST00000526960 VCANP13611 3396 aa17.45■□□□□ 0.38
PTP4A2-209ENST00000526960 TCRBV5S4A2TA0A5A2 114 aa17.44■□□□□ 0.38
PTP4A2-209ENST00000526960 SLC25A27O95847 323 aa17.44■□□□□ 0.38
PTP4A2-209ENST00000526960 RLBP1P12271 317 aa17.44■□□□□ 0.38
PTP4A2-209ENST00000526960 SHHQ15465 462 aa17.44■□□□□ 0.38
PTP4A2-209ENST00000526960 ZNF697Q5TEC3 545 aa17.44■□□□□ 0.38
PTP4A2-209ENST00000526960 ITPRIPQ8IWB1 547 aa17.44■□□□□ 0.38
PTP4A2-209ENST00000526960 CCDC17Q96LX7 622 aa17.44■□□□□ 0.38
PTP4A2-209ENST00000526960 SEMA6BQ9H3T3 888 aa17.44■□□□□ 0.38
PTP4A2-209ENST00000526960 DIS3Q9Y2L1 958 aaKnown RBP17.44■□□□□ 0.38
PTP4A2-209ENST00000526960 SMAD3P84022 425 aaKnown RBP17.43■□□□□ 0.38
PTP4A2-209ENST00000526960 LRRC41Q15345 812 aa17.43■□□□□ 0.38
PTP4A2-209ENST00000526960 KIAA1755Q5JYT7 1200 aa17.43■□□□□ 0.38
PTP4A2-209ENST00000526960 RHPN1Q8TCX5 695 aa17.43■□□□□ 0.38
PTP4A2-209ENST00000526960 MAML3Q96JK9 1138 aa17.43■□□□□ 0.38
PTP4A2-209ENST00000526960 SH2D4AQ9H788 454 aa17.43■□□□□ 0.38
PTP4A2-209ENST00000526960 VCPKMTQ9H867 229 aa17.43■□□□□ 0.38
PTP4A2-209ENST00000526960 ATP8A2Q9NTI2 1148 aa17.43■□□□□ 0.38
PTP4A2-209ENST00000526960 ATP11BQ9Y2G3 1177 aa17.43■□□□□ 0.38
PTP4A2-209ENST00000526960 FRMPD3Q5JV73 1810 aa17.42■□□□□ 0.38
PTP4A2-209ENST00000526960 ZNF236Q9UL36 1845 aa17.42■□□□□ 0.38
PTP4A2-209ENST00000526960 MPHOSPH10O00566 681 aaKnown RBP17.42■□□□□ 0.38
PTP4A2-209ENST00000526960 FCER1AP12319 257 aa17.42■□□□□ 0.38
PTP4A2-209ENST00000526960 TANGO6Q9C0B7 1094 aa17.42■□□□□ 0.38
PTP4A2-209ENST00000526960 ARHGEF10LQ9HCE6 1279 aa17.42■□□□□ 0.38
PTP4A2-209ENST00000526960 EXOC6BQ9Y2D4 811 aa17.42■□□□□ 0.38
PTP4A2-209ENST00000526960 TACC3Q9Y6A5 838 aa17.42■□□□□ 0.38
PTP4A2-209ENST00000526960 RLFQ13129 1914 aa17.42■□□□□ 0.38
PTP4A2-209ENST00000526960 ZNF532Q9HCE3 1301 aa17.42■□□□□ 0.38
PTP4A2-209ENST00000526960 WDR46O15213 610 aaKnown RBP17.41■□□□□ 0.38
PTP4A2-209ENST00000526960 FLOT1O75955 427 aa17.41■□□□□ 0.38
PTP4A2-209ENST00000526960 ADCYAP1R1P41586 468 aa17.41■□□□□ 0.38
PTP4A2-209ENST00000526960 PRAMEF19Q5SWL8 479 aa17.41■□□□□ 0.38
PTP4A2-209ENST00000526960 CLASRPQ8N2M8 674 aaKnown RBP17.41■□□□□ 0.38
PTP4A2-209ENST00000526960 BADQ92934 168 aa17.41■□□□□ 0.38
PTP4A2-209ENST00000526960 CDX2Q99626 313 aaPredicted RBP17.41■□□□□ 0.38
PTP4A2-209ENST00000526960 PDLIM7Q9NR12 457 aa17.41■□□□□ 0.38
PTP4A2-209ENST00000526960 PHF24Q9UPV7 400 aa17.41■□□□□ 0.38
PTP4A2-209ENST00000526960 PRUNE2Q8WUY3 3088 aa17.4■□□□□ 0.38
PTP4A2-209ENST00000526960 EYSQ5T1H1 3165 aa17.4■□□□□ 0.38
PTP4A2-209ENST00000526960 TRIM43BA6NCK2 446 aa17.4■□□□□ 0.38
PTP4A2-209ENST00000526960 EVX2Q03828 476 aa17.4■□□□□ 0.38
PTP4A2-209ENST00000526960 TRIM60Q495X7 471 aa17.4■□□□□ 0.38
PTP4A2-209ENST00000526960 NCAPG2Q86XI2 1143 aa17.4■□□□□ 0.38
PTP4A2-209ENST00000526960 RIOX2Q8IUF8 465 aa17.4■□□□□ 0.38
PTP4A2-209ENST00000526960 RPAP2Q8IXW5 612 aaPredicted RBP17.4■□□□□ 0.38
PTP4A2-209ENST00000526960 SDR42E1Q8WUS8 393 aa17.4■□□□□ 0.38
PTP4A2-209ENST00000526960 TRIM43Q96BQ3 446 aaPredicted RBP17.4■□□□□ 0.38
PTP4A2-209ENST00000526960 ATG4CQ96DT6 458 aa17.4■□□□□ 0.38
PTP4A2-209ENST00000526960 KIF1BPQ96EK5 621 aa17.4■□□□□ 0.38
PTP4A2-209ENST00000526960 TMEM265A0A087WTH1 108 aa17.39■□□□□ 0.37
PTP4A2-209ENST00000526960 PLS1Q14651 629 aa17.39■□□□□ 0.37
PTP4A2-209ENST00000526960 TMEM132BQ14DG7 1078 aa17.39■□□□□ 0.37
PTP4A2-209ENST00000526960 C9orf50Q5SZB4 431 aa17.39■□□□□ 0.37
PTP4A2-209ENST00000526960 C12orf60Q5U649 245 aa17.39■□□□□ 0.37
PTP4A2-209ENST00000526960 LCORLQ8N3X6 602 aa17.39■□□□□ 0.37
PTP4A2-209ENST00000526960 TINF2Q9BSI4 451 aa17.39■□□□□ 0.37
PTP4A2-209ENST00000526960 KANSL2Q9H9L4 492 aa17.39■□□□□ 0.37
PTP4A2-209ENST00000526960 IL1RAPL2Q9NP60 686 aa17.39■□□□□ 0.37
PTP4A2-209ENST00000526960 GOLIM4O00461 696 aa17.38■□□□□ 0.37
PTP4A2-209ENST00000526960 KIAA0355O15063 1070 aa17.38■□□□□ 0.37
PTP4A2-209ENST00000526960 RARBP10826 455 aa17.38■□□□□ 0.37
PTP4A2-209ENST00000526960 AKR1B1P15121 316 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms