RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 CLIP2Q9UDT6 1046 aa23.06■■□□□ 1.28
PPP1CA-204ENST00000526510 MTMR7Q9Y216 660 aa23.06■■□□□ 1.28
PPP1CA-204ENST00000526510 hCG_1642624A0A1W2PR95 340 aa23.05■■□□□ 1.28
PPP1CA-204ENST00000526510 PALM3A6NDB9 673 aaPredicted RBP23.05■■□□□ 1.28
PPP1CA-204ENST00000526510 PRPF40AO75400 957 aaKnown RBP23.05■■□□□ 1.28
PPP1CA-204ENST00000526510 GDF11O95390 407 aa23.05■■□□□ 1.28
PPP1CA-204ENST00000526510 TTLL1O95922 423 aa23.05■■□□□ 1.28
PPP1CA-204ENST00000526510 KIF5BP33176 963 aa23.05■■□□□ 1.28
PPP1CA-204ENST00000526510 SLC35G1Q2M3R5 365 aa23.05■■□□□ 1.28
PPP1CA-204ENST00000526510 KRT40Q6A162 431 aa23.05■■□□□ 1.28
PPP1CA-204ENST00000526510 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.05■■□□□ 1.288e-7■■■□□ 14.6
PPP1CA-204ENST00000526510 LRRC47Q8N1G4 583 aaKnown RBP23.04■■□□□ 1.28
PPP1CA-204ENST00000526510 WASF1Q92558 559 aa23.04■■□□□ 1.28
PPP1CA-204ENST00000526510 SHISA4Q96DD7 197 aa23.04■■□□□ 1.28
PPP1CA-204ENST00000526510 TEPSINQ96N21 525 aa23.04■■□□□ 1.28
PPP1CA-204ENST00000526510 HACL1Q9UJ83 578 aa23.04■■□□□ 1.28
PPP1CA-204ENST00000526510 V9GY48 417 aaPredicted RBP23.04■■□□□ 1.28
PPP1CA-204ENST00000526510 H7C1D1 291 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 TRAK2O60296 914 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 RASA3Q14644 834 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 ABCB5Q2M3G0 1257 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 SIAH1Q8IUQ4 282 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 TRPM4Q8TD43 1214 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 USP17L5A8MUK1 530 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 KIF28PB7ZC32 967 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 PTMSP20962 102 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 EPS15P42566 896 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 SEPT2Q15019 361 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 C9orf131Q5VYM1 1079 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 USP48Q86UV5 1035 aa23.03■■□□□ 1.28
PPP1CA-204ENST00000526510 TBC1D12O60347 775 aa23.02■■□□□ 1.28
PPP1CA-204ENST00000526510 DDNO94850 711 aaPredicted RBP23.02■■□□□ 1.28
PPP1CA-204ENST00000526510 GOLGA8HP0CJ92 632 aa23.02■■□□□ 1.28
PPP1CA-204ENST00000526510 TNNI2P48788 182 aa23.02■■□□□ 1.28
PPP1CA-204ENST00000526510 KIF23Q02241 960 aaPredicted RBP23.02■■□□□ 1.28
PPP1CA-204ENST00000526510 USP17L2Q6R6M4 530 aa23.02■■□□□ 1.28
PPP1CA-204ENST00000526510 TMEM179Q6ZVK1 233 aa23.02■■□□□ 1.28
PPP1CA-204ENST00000526510 TMEM87AQ8NBN3 555 aa23.02■■□□□ 1.28
PPP1CA-204ENST00000526510 PDHBP11177 359 aa23.01■■□□□ 1.27
PPP1CA-204ENST00000526510 MAP3K10Q02779 954 aa23.01■■□□□ 1.27
PPP1CA-204ENST00000526510 MIGA2Q7L4E1 593 aa23.01■■□□□ 1.27
PPP1CA-204ENST00000526510 CYTH3O43739 400 aa23■■□□□ 1.27
PPP1CA-204ENST00000526510 GH2P01242 217 aa23■■□□□ 1.27
PPP1CA-204ENST00000526510 PARP1P09874 1014 aaKnown RBP23■■□□□ 1.27
PPP1CA-204ENST00000526510 SNHG28P0DPA3 235 aa23■■□□□ 1.27
PPP1CA-204ENST00000526510 EEF2P13639 858 aaKnown RBP23■■□□□ 1.27
PPP1CA-204ENST00000526510 VEGFAP15692 232 aaPredicted RBP23■■□□□ 1.27
PPP1CA-204ENST00000526510 NCLP19338 710 aaKnown RBP23■■□□□ 1.27
PPP1CA-204ENST00000526510 GNAQP50148 359 aa23■■□□□ 1.27
PPP1CA-204ENST00000526510 HIRAP54198 1017 aaPredicted RBP23■■□□□ 1.27
PPP1CA-204ENST00000526510 MKL1Q969V6 931 aa23■■□□□ 1.27
PPP1CA-204ENST00000526510 KANSL2Q9H9L4 492 aa23■■□□□ 1.27
PPP1CA-204ENST00000526510 NYAP2Q9P242 653 aa23■■□□□ 1.27
PPP1CA-204ENST00000526510 FIBPO43427 364 aa23■■□□□ 1.27
PPP1CA-204ENST00000526510 ATP2B2Q01814 1243 aa23■■□□□ 1.27
PPP1CA-204ENST00000526510 AKAP17AQ02040 695 aaKnown RBP23■■□□□ 1.27
PPP1CA-204ENST00000526510 TNFAIP1Q13829 316 aa23■■□□□ 1.27
PPP1CA-204ENST00000526510 CPVLQ9H3G5 476 aa23■■□□□ 1.27
PPP1CA-204ENST00000526510 TFIP11Q9UBB9 837 aaKnown RBP23■■□□□ 1.27
PPP1CA-204ENST00000526510 KCNJ14Q9UNX9 436 aa23■■□□□ 1.27
PPP1CA-204ENST00000526510 KLRF2D3W0D1 207 aa22.99■■□□□ 1.27
PPP1CA-204ENST00000526510 KRT85P78386 507 aa22.99■■□□□ 1.27
PPP1CA-204ENST00000526510 TRIM29Q14134 588 aa22.99■■□□□ 1.27
PPP1CA-204ENST00000526510 PPP4R3BQ5MIZ7 849 aa22.99■■□□□ 1.27
PPP1CA-204ENST00000526510 GADD45BO75293 160 aaPredicted RBP22.98■■□□□ 1.27
PPP1CA-204ENST00000526510 MMP1P03956 469 aa22.98■■□□□ 1.27
PPP1CA-204ENST00000526510 ICA1Q05084 483 aa22.98■■□□□ 1.27
PPP1CA-204ENST00000526510 PIBF1Q8WXW3 757 aa22.98■■□□□ 1.27
PPP1CA-204ENST00000526510 VPS54Q9P1Q0 977 aa22.98■■□□□ 1.27
PPP1CA-204ENST00000526510 PFKFB3Q16875 520 aaPredicted RBP22.97■■□□□ 1.27
PPP1CA-204ENST00000526510 ANGEL2Q5VTE6 544 aaKnown RBP22.97■■□□□ 1.27
PPP1CA-204ENST00000526510 GPT2Q8TD30 523 aa22.97■■□□□ 1.27
PPP1CA-204ENST00000526510 LZTS2Q9BRK4 669 aa22.97■■□□□ 1.27
PPP1CA-204ENST00000526510 SPZ1Q9BXG8 430 aa22.97■■□□□ 1.27
PPP1CA-204ENST00000526510 DEFB129Q9H1M3 183 aa22.97■■□□□ 1.27
PPP1CA-204ENST00000526510 FRMPD2Q68DX3 1309 aaPredicted RBP22.97■■□□□ 1.27
PPP1CA-204ENST00000526510 SCG2P13521 617 aa22.97■■□□□ 1.27
PPP1CA-204ENST00000526510 U2AF2P26368 475 aaKnown RBP eCLIP22.97■■□□□ 1.27
PPP1CA-204ENST00000526510 CABP5Q9NP86 173 aa22.97■■□□□ 1.27
PPP1CA-204ENST00000526510 ZNF543Q08ER8 600 aa22.96■■□□□ 1.27
PPP1CA-204ENST00000526510 GPR162Q16538 588 aa22.96■■□□□ 1.27
PPP1CA-204ENST00000526510 SKOR2Q2VWA4 1001 aaPredicted RBP22.96■■□□□ 1.27
PPP1CA-204ENST00000526510 BRAPQ7Z569 592 aa22.96■■□□□ 1.27
PPP1CA-204ENST00000526510 PHF20Q9BVI0 1012 aa22.96■■□□□ 1.27
PPP1CA-204ENST00000526510 FTOQ9C0B1 505 aaKnown RBP eCLIP22.96■■□□□ 1.27
PPP1CA-204ENST00000526510 PHF20L1A8MW92 1017 aa22.95■■□□□ 1.26
PPP1CA-204ENST00000526510 ASPRV1Q53RT3 343 aa22.95■■□□□ 1.26
PPP1CA-204ENST00000526510 ZBTB21Q9ULJ3 1066 aa22.95■■□□□ 1.26
PPP1CA-204ENST00000526510 DDX49Q9Y6V7 483 aaKnown RBP22.95■■□□□ 1.26
PPP1CA-204ENST00000526510 DOCK1Q14185 1865 aa22.95■■□□□ 1.26
PPP1CA-204ENST00000526510 A0A1W2PRG0 241 aa22.94■■□□□ 1.26
PPP1CA-204ENST00000526510 BTBD18B2RXH4 712 aa22.94■■□□□ 1.26
PPP1CA-204ENST00000526510 SMARCA1P28370 1054 aa22.94■■□□□ 1.26
PPP1CA-204ENST00000526510 CAP2P40123 477 aa22.94■■□□□ 1.26
PPP1CA-204ENST00000526510 NBPF12Q5TAG4 269 aaPredicted RBP22.94■■□□□ 1.26
PPP1CA-204ENST00000526510 DIS3L2Q8IYB7 885 aaKnown RBP22.94■■□□□ 1.26
PPP1CA-204ENST00000526510 LEO1Q8WVC0 666 aaPredicted RBP22.94■■□□□ 1.26
PPP1CA-204ENST00000526510 USP28Q96RU2 1077 aa22.94■■□□□ 1.26
PPP1CA-204ENST00000526510 UBA5Q9GZZ9 404 aa22.94■■□□□ 1.26
PPP1CA-204ENST00000526510 GGA3Q9NZ52 723 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms