RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 GPC2Q8N158 579 aa10.16□□□□□ -0.78
PABPC4-220ENST00000525669 CPVLQ9H3G5 476 aa10.16□□□□□ -0.78
PABPC4-220ENST00000525669 RBM28Q9NW13 759 aaKnown RBP10.16□□□□□ -0.78
PABPC4-220ENST00000525669 MTMR4Q9NYA4 1195 aa10.16□□□□□ -0.78
PABPC4-220ENST00000525669 GPRC5DQ9NZD1 345 aa10.16□□□□□ -0.78
PABPC4-220ENST00000525669 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.16□□□□□ -0.78
PABPC4-220ENST00000525669 MAD2L2Q9UI95 211 aa10.16□□□□□ -0.78
PABPC4-220ENST00000525669 KIF3AQ9Y496 699 aa10.16□□□□□ -0.78
PABPC4-220ENST00000525669 DOCK1Q14185 1865 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 USP17L5A8MUK1 530 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 KIF28PB7ZC32 967 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 RAD21O60216 631 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 EEF2P13639 858 aaKnown RBP10.15□□□□□ -0.78
PABPC4-220ENST00000525669 TNNI2P48788 182 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 NT5C2P49902 561 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 RASA3Q14644 834 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 ABCB5Q2M3G0 1257 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 SLC35G1Q2M3R5 365 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 ANGEL2Q5VTE6 544 aaKnown RBP10.15□□□□□ -0.78
PABPC4-220ENST00000525669 KRT40Q6A162 431 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 USP17L2Q6R6M4 530 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 TRIM22Q8IYM9 498 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 LMBRD1Q9NUN5 540 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 TFIP11Q9UBB9 837 aaKnown RBP10.15□□□□□ -0.78
PABPC4-220ENST00000525669 PGAP2Q9UHJ9 254 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 KCNJ14Q9UNX9 436 aa10.15□□□□□ -0.78
PABPC4-220ENST00000525669 V9GY48 417 aaPredicted RBP10.15□□□□□ -0.78
PABPC4-220ENST00000525669 GOLGA6L22H0YM25 854 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 PRPF3O43395 683 aaKnown RBP10.14□□□□□ -0.79
PABPC4-220ENST00000525669 FIBPO43427 364 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 DEXIO95424 95 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 TTLL1O95922 423 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 GH2P01242 217 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 KIF5BP33176 963 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 NOVP48745 357 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 HIRAP54198 1017 aaPredicted RBP10.14□□□□□ -0.79
PABPC4-220ENST00000525669 AKAP17AQ02040 695 aaKnown RBP10.14□□□□□ -0.79
PABPC4-220ENST00000525669 CEBPZQ03701 1054 aaKnown RBP10.14□□□□□ -0.79
PABPC4-220ENST00000525669 PPP2R5BQ15173 497 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 PKN1Q16512 942 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 FKBP1CQ5VVH2 108 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 PRAMEF18Q5VWM3 479 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 USP48Q86UV5 1035 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 FAM83AQ86UY5 434 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 METTL16Q86W50 562 aaKnown RBP10.14□□□□□ -0.79
PABPC4-220ENST00000525669 FBXO18Q8NFZ0 1043 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 SHISA4Q96DD7 197 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 CCDC17Q96LX7 622 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 TEPSINQ96N21 525 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 RNF26Q9BY78 433 aaPredicted RBP10.14□□□□□ -0.79
PABPC4-220ENST00000525669 GPCPD1Q9NPB8 672 aa10.14□□□□□ -0.79
PABPC4-220ENST00000525669 PALM3A6NDB9 673 aaPredicted RBP10.13□□□□□ -0.79
PABPC4-220ENST00000525669 KLRF2D3W0D1 207 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 TRAK2O60296 914 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 GADD45BO75293 160 aaPredicted RBP10.13□□□□□ -0.79
PABPC4-220ENST00000525669 PARP1P09874 1014 aaKnown RBP10.13□□□□□ -0.79
PABPC4-220ENST00000525669 VEGFAP15692 232 aaPredicted RBP10.13□□□□□ -0.79
PABPC4-220ENST00000525669 ICA1Q05084 483 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 TRIM29Q14134 588 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 DLK2Q6UY11 383 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 TMEM179Q6ZVK1 233 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 CCDC84Q86UT8 332 aaPredicted RBP10.13□□□□□ -0.79
PABPC4-220ENST00000525669 SIAH1Q8IUQ4 282 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 WASF1Q92558 559 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 FTOQ9C0B1 505 aaKnown RBP eCLIP10.13□□□□□ -0.79
PABPC4-220ENST00000525669 UBA5Q9GZZ9 404 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 VAT1LQ9HCJ6 419 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 VPS54Q9P1Q0 977 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 HERC5Q9UII4 1024 aaKnown RBP10.13□□□□□ -0.79
PABPC4-220ENST00000525669 ISY1Q9ULR0 285 aaKnown RBP10.13□□□□□ -0.79
PABPC4-220ENST00000525669 FZD1Q9UP38 647 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 ATP6V1DQ9Y5K8 247 aa10.13□□□□□ -0.79
PABPC4-220ENST00000525669 BAZ2BQ9UIF8 2168 aaKnown RBP10.12□□□□□ -0.79
PABPC4-220ENST00000525669 CYTH3O43739 400 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 PDHBP11177 359 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 PDIA4P13667 645 aaKnown RBP10.12□□□□□ -0.79
PABPC4-220ENST00000525669 MMP14P50281 582 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 KIF23Q02241 960 aaPredicted RBP10.12□□□□□ -0.79
PABPC4-220ENST00000525669 TNFAIP1Q13829 316 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 CCDC96Q2M329 555 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 NBPF12Q5TAG4 269 aaPredicted RBP10.12□□□□□ -0.79
PABPC4-220ENST00000525669 TTBK2Q6IQ55 1244 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 KCTD1Q719H9 257 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 OXER1Q8TDS5 423 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.791e-7■□□□□ 9.9
PABPC4-220ENST00000525669 MAP3K14Q99558 947 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 DEFB129Q9H1M3 183 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 ZSCAN16Q9H4T2 348 aaPredicted RBP10.12□□□□□ -0.79
PABPC4-220ENST00000525669 KANSL2Q9H9L4 492 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 CABP5Q9NP86 173 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 GGA3Q9NZ52 723 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 PHIPQ8WWQ0 1821 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 OTOFQ9HC10 1997 aa10.12□□□□□ -0.79
PABPC4-220ENST00000525669 A0A1W2PRG0 241 aa10.11□□□□□ -0.79
PABPC4-220ENST00000525669 ADAMTS3O15072 1205 aa10.11□□□□□ -0.79
PABPC4-220ENST00000525669 TBC1D12O60347 775 aa10.11□□□□□ -0.79
PABPC4-220ENST00000525669 MMP1P03956 469 aa10.11□□□□□ -0.79
PABPC4-220ENST00000525669 SCG2P13521 617 aa10.11□□□□□ -0.79
PABPC4-220ENST00000525669 LMOD1P29536 600 aaPredicted RBP10.11□□□□□ -0.79
PABPC4-220ENST00000525669 SLC16A2P36021 539 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms