RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 IRX3P78415 501 aaPredicted RBP15.23■□□□□ 0.03
CLP1-202ENST00000525602 ICA1Q05084 483 aa15.23■□□□□ 0.03
CLP1-202ENST00000525602 MCMDC2Q4G0Z9 681 aa15.23■□□□□ 0.03
CLP1-202ENST00000525602 VCAM1P19320 739 aa15.22■□□□□ 0.03
CLP1-202ENST00000525602 SDSP20132 328 aa15.22■□□□□ 0.03
CLP1-202ENST00000525602 RASA1P20936 1047 aa15.22■□□□□ 0.03
CLP1-202ENST00000525602 GCLCP48506 637 aaPredicted RBP15.22■□□□□ 0.03
CLP1-202ENST00000525602 FAM110CQ1W6H9 321 aa15.22■□□□□ 0.03
CLP1-202ENST00000525602 ZNF589Q86UQ0 364 aaPredicted RBP15.22■□□□□ 0.03
CLP1-202ENST00000525602 ANKRD13CQ8N6S4 541 aa15.22■□□□□ 0.03
CLP1-202ENST00000525602 SLAIN1Q8ND83 568 aa15.22■□□□□ 0.03
CLP1-202ENST00000525602 PRO3102Q9H379 93 aa15.22■□□□□ 0.03
CLP1-202ENST00000525602 MKNK2Q9HBH9 465 aa15.22■□□□□ 0.03
CLP1-202ENST00000525602 PLXNB2O15031 1838 aa15.21■□□□□ 0.03
CLP1-202ENST00000525602 TNPO2O14787 897 aaKnown RBP15.21■□□□□ 0.02
CLP1-202ENST00000525602 GSPT1P15170 499 aaKnown RBP15.21■□□□□ 0.02
CLP1-202ENST00000525602 HERVK_113P62684 666 aa15.21■□□□□ 0.02
CLP1-202ENST00000525602 UBXN2AP68543 259 aa15.21■□□□□ 0.02
CLP1-202ENST00000525602 PPARAQ07869 468 aa15.21■□□□□ 0.02
CLP1-202ENST00000525602 TTC22Q5TAA0 569 aa15.21■□□□□ 0.02
CLP1-202ENST00000525602 SIAH1Q8IUQ4 282 aa15.21■□□□□ 0.02
CLP1-202ENST00000525602 NKX2-3Q8TAU0 364 aa15.21■□□□□ 0.02
CLP1-202ENST00000525602 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.21■□□□□ 0.02
CLP1-202ENST00000525602 ARHGEF10LQ9HCE6 1279 aa15.21■□□□□ 0.02
CLP1-202ENST00000525602 DNAH12Q6ZR08 3092 aa15.21■□□□□ 0.02
CLP1-202ENST00000525602 CCDC171Q6TFL3 1326 aa15.2■□□□□ 0.02
CLP1-202ENST00000525602 UNC80Q8N2C7 3258 aa15.2■□□□□ 0.02
CLP1-202ENST00000525602 DIS3LQ8TF46 1054 aaKnown RBP15.2■□□□□ 0.02
CLP1-202ENST00000525602 DEFB118Q96PH6 123 aa15.2■□□□□ 0.02
CLP1-202ENST00000525602 P2RX7Q99572 595 aaKnown RBP15.2■□□□□ 0.02
CLP1-202ENST00000525602 KANSL2Q9H9L4 492 aa15.2■□□□□ 0.02
CLP1-202ENST00000525602 ZNF287Q9HBT7 754 aa15.2■□□□□ 0.02
CLP1-202ENST00000525602 TMX2Q9Y320 296 aa15.2■□□□□ 0.02
CLP1-202ENST00000525602 CUL9Q8IWT3 2517 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 USP17L15C9J2P7 530 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 USP17L13C9JLJ4 530 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 USP17L11C9JVI0 530 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 USP17L18D6R9N7 530 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 USP17L22D6RA61 530 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 USP17L17D6RBQ6 530 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 USP17L19D6RCP7 530 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 USP17L20D6RJB6 530 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 SOX1O00570 391 aaPredicted RBP15.19■□□□□ 0.02
CLP1-202ENST00000525602 PRDM1O75626 825 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 SGPL1O95470 568 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 SLC3A2P08195 630 aaKnown RBP15.19■□□□□ 0.02
CLP1-202ENST00000525602 USP17L24Q0WX57 530 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 ALX1Q15699 326 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 HTATIP2Q9BUP3 242 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 RPAP3Q9H6T3 665 aaPredicted RBP15.19■□□□□ 0.02
CLP1-202ENST00000525602 SH2D4AQ9H788 454 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 DIAPH3Q9NSV4 1193 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 MORF4L1Q9UBU8 362 aa15.19■□□□□ 0.02
CLP1-202ENST00000525602 PLIN4Q96Q06 1357 aa15.18■□□□□ 0.02
CLP1-202ENST00000525602 HIP1O00291 1037 aa15.18■□□□□ 0.02
CLP1-202ENST00000525602 PEX10O60683 326 aa15.18■□□□□ 0.02
CLP1-202ENST00000525602 HSPD1P10809 573 aaKnown RBP15.18■□□□□ 0.02
CLP1-202ENST00000525602 EEF2P13639 858 aaKnown RBP15.18■□□□□ 0.02
CLP1-202ENST00000525602 ATP2B2Q01814 1243 aa15.18■□□□□ 0.02
CLP1-202ENST00000525602 PDE4BQ07343 736 aa15.18■□□□□ 0.02
CLP1-202ENST00000525602 KIAA1755Q5JYT7 1200 aa15.18■□□□□ 0.02
CLP1-202ENST00000525602 CATSPERGQ6ZRH7 1159 aa15.18■□□□□ 0.02
CLP1-202ENST00000525602 ZNF444Q8N0Y2 327 aaPredicted RBP15.18■□□□□ 0.02
CLP1-202ENST00000525602 GTF3C2Q8WUA4 911 aaPredicted RBP15.18■□□□□ 0.02
CLP1-202ENST00000525602 VCPKMTQ9H867 229 aa15.18■□□□□ 0.02
CLP1-202ENST00000525602 TXNRD2Q9NNW7 524 aa15.18■□□□□ 0.02
CLP1-202ENST00000525602 ZMYM6O95789 1325 aa15.18■□□□□ 0.02
CLP1-202ENST00000525602 IGKV6D-41A0A0C4DH26 115 aa15.17■□□□□ 0.02
CLP1-202ENST00000525602 MFAP1P55081 439 aaKnown RBP15.17■□□□□ 0.02
CLP1-202ENST00000525602 TRIM32Q13049 653 aa15.17■□□□□ 0.02
CLP1-202ENST00000525602 POTEEQ6S8J3 1075 aa15.17■□□□□ 0.02
CLP1-202ENST00000525602 CWC27Q6UX04 472 aaKnown RBP15.17■□□□□ 0.02
CLP1-202ENST00000525602 LPAR1Q92633 364 aa15.17■□□□□ 0.02
CLP1-202ENST00000525602 PAK6Q9NQU5 681 aaPredicted RBP15.17■□□□□ 0.02
CLP1-202ENST00000525602 ANAPC4Q9UJX5 808 aa15.17■□□□□ 0.02
CLP1-202ENST00000525602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLP1-202ENST00000525602 RLFQ13129 1914 aa15.16■□□□□ 0.02
CLP1-202ENST00000525602 FGAP02671 866 aa15.16■□□□□ 0.02
CLP1-202ENST00000525602 TFRCP02786 760 aaKnown RBP15.16■□□□□ 0.02
CLP1-202ENST00000525602 CTDSPL2Q05D32 466 aa15.16■□□□□ 0.02
CLP1-202ENST00000525602 CENPQQ7L2Z9 268 aaPredicted RBP15.16■□□□□ 0.02
CLP1-202ENST00000525602 SPICE1Q8N0Z3 855 aa15.16■□□□□ 0.02
CLP1-202ENST00000525602 LRCH3Q96II8 777 aa15.16■□□□□ 0.02
CLP1-202ENST00000525602 PAWRQ96IZ0 340 aaKnown RBP15.16■□□□□ 0.02
CLP1-202ENST00000525602 PAGR1Q9BTK6 254 aa15.16■□□□□ 0.02
CLP1-202ENST00000525602 RBPJLQ9UBG7 517 aa15.16■□□□□ 0.02
CLP1-202ENST00000525602 A0A0G2JMZ2 1700 aa15.16■□□□□ 0.02
CLP1-202ENST00000525602 LAMA4Q16363 1823 aa15.16■□□□□ 0.02
CLP1-202ENST00000525602 MYH4Q9Y623 1939 aa15.16■□□□□ 0.02
CLP1-202ENST00000525602 EYSQ5T1H1 3165 aa15.16■□□□□ 0.02
CLP1-202ENST00000525602 PARP14Q460N5 1801 aa15.15■□□□□ 0.02
CLP1-202ENST00000525602 SPDYE16A6NNV3 312 aaPredicted RBP15.15■□□□□ 0.02
CLP1-202ENST00000525602 WDR46O15213 610 aaKnown RBP15.15■□□□□ 0.02
CLP1-202ENST00000525602 EVI5O60447 810 aa15.15■□□□□ 0.02
CLP1-202ENST00000525602 CNMDO75829 334 aa15.15■□□□□ 0.02
CLP1-202ENST00000525602 ERVK-9P63128 1117 aa15.15■□□□□ 0.02
CLP1-202ENST00000525602 ERVK-24P63145 666 aa15.15■□□□□ 0.02
CLP1-202ENST00000525602 IRF5Q13568 498 aa15.15■□□□□ 0.02
CLP1-202ENST00000525602 FAM47AQ5JRC9 791 aa15.15■□□□□ 0.02
CLP1-202ENST00000525602 LBX2Q6XYB7 198 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms