RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 AKNAD1Q5T1N1 836 aa8.81□□□□□ -1
CTR9-202ENST00000524523 MRPL14Q6P1L8 145 aaKnown RBP8.81□□□□□ -1
CTR9-202ENST00000524523 CPLX2Q6PUV4 134 aaKnown RBP8.81□□□□□ -1
CTR9-202ENST00000524523 MFSD6Q6ZSS7 791 aa8.81□□□□□ -1
CTR9-202ENST00000524523 TRIM46Q7Z4K8 759 aa8.81□□□□□ -1
CTR9-202ENST00000524523 AMIGO3Q86WK7 504 aa8.81□□□□□ -1
CTR9-202ENST00000524523 TBC1D22AQ8WUA7 517 aa8.81□□□□□ -1
CTR9-202ENST00000524523 TRIM47Q96LD4 638 aa8.81□□□□□ -1
CTR9-202ENST00000524523 RIOK1Q9BRS2 568 aaKnown RBP8.81□□□□□ -1
CTR9-202ENST00000524523 CCDC196A0A1B0GTZ2 297 aa8.8□□□□□ -1
CTR9-202ENST00000524523 GOLGA6L3A6NEY3 463 aa8.8□□□□□ -1
CTR9-202ENST00000524523 PRC1O43663 620 aa8.8□□□□□ -1
CTR9-202ENST00000524523 PRPF40AO75400 957 aaKnown RBP8.8□□□□□ -1
CTR9-202ENST00000524523 MBD4O95243 580 aa8.8□□□□□ -1
CTR9-202ENST00000524523 APBA3O96018 575 aa8.8□□□□□ -1
CTR9-202ENST00000524523 SLC3A2P08195 630 aaKnown RBP8.8□□□□□ -1
CTR9-202ENST00000524523 NPR1P16066 1061 aa8.8□□□□□ -1
CTR9-202ENST00000524523 GYG1P46976 350 aa8.8□□□□□ -1
CTR9-202ENST00000524523 RAB15P59190 212 aa8.8□□□□□ -1
CTR9-202ENST00000524523 UBE2HP62256 183 aa8.8□□□□□ -1
CTR9-202ENST00000524523 ST3GAL1Q11201 340 aa8.8□□□□□ -1
CTR9-202ENST00000524523 CCDC178Q5BJE1 867 aa8.8□□□□□ -1
CTR9-202ENST00000524523 TTLL5Q6EMB2 1281 aa8.8□□□□□ -1
CTR9-202ENST00000524523 NOL8Q76FK4 1167 aaKnown RBP8.8□□□□□ -1
CTR9-202ENST00000524523 FAM184AQ8NB25 1140 aa8.8□□□□□ -1
CTR9-202ENST00000524523 IGDCC4Q8TDY8 1250 aa8.8□□□□□ -1
CTR9-202ENST00000524523 NSUN4Q96CB9 384 aaKnown RBP8.8□□□□□ -1
CTR9-202ENST00000524523 CRNKL1Q9BZJ0 848 aaKnown RBP8.8□□□□□ -1
CTR9-202ENST00000524523 TFCP2L1Q9NZI6 479 aa8.8□□□□□ -1
CTR9-202ENST00000524523 RAI14Q9P0K7 980 aa8.8□□□□□ -1
CTR9-202ENST00000524523 ANKIB1Q9P2G1 1089 aa8.8□□□□□ -1
CTR9-202ENST00000524523 CFAP45Q9UL16 551 aa8.8□□□□□ -1
CTR9-202ENST00000524523 SLC4A4Q9Y6R1 1079 aa8.8□□□□□ -1
CTR9-202ENST00000524523 NID2Q14112 1375 aa8.8□□□□□ -1
CTR9-202ENST00000524523 ESPNB1AK53 854 aa8.79□□□□□ -1
CTR9-202ENST00000524523 BAG3O95817 575 aa8.79□□□□□ -1
CTR9-202ENST00000524523 KRT85P78386 507 aa8.79□□□□□ -1
CTR9-202ENST00000524523 SCRN1Q12765 414 aa8.79□□□□□ -1
CTR9-202ENST00000524523 SLFNL1Q499Z3 407 aa8.79□□□□□ -1
CTR9-202ENST00000524523 SYNE3Q6ZMZ3 975 aa8.79□□□□□ -1
CTR9-202ENST00000524523 CCDC125Q86Z20 511 aa8.79□□□□□ -1
CTR9-202ENST00000524523 NECAB1Q8N987 351 aa8.79□□□□□ -1
CTR9-202ENST00000524523 NSUN7Q8NE18 718 aaKnown RBP8.79□□□□□ -1
CTR9-202ENST00000524523 ESR2Q92731 530 aa8.79□□□□□ -1
CTR9-202ENST00000524523 ZFP42Q96MM3 310 aa8.79□□□□□ -1
CTR9-202ENST00000524523 MRIQ9BWK5 157 aa8.79□□□□□ -1
CTR9-202ENST00000524523 TMX4Q9H1E5 349 aaPredicted RBP8.79□□□□□ -1
CTR9-202ENST00000524523 GDPD2Q9HCC8 539 aa8.79□□□□□ -1
CTR9-202ENST00000524523 ABCF2Q9UG63 623 aa8.79□□□□□ -1
CTR9-202ENST00000524523 GGA1Q9UJY5 639 aa8.79□□□□□ -1
CTR9-202ENST00000524523 ATP6V0A2Q9Y487 856 aa8.79□□□□□ -1
CTR9-202ENST00000524523 UBR3Q6ZT12 1888 aa8.79□□□□□ -1
CTR9-202ENST00000524523 DUOX1Q9NRD9 1551 aa8.78□□□□□ -1
CTR9-202ENST00000524523 DOCK2Q92608 1830 aa8.78□□□□□ -1
CTR9-202ENST00000524523 ERICH2A1L162 156 aa8.78□□□□□ -1
CTR9-202ENST00000524523 SNAP23O00161 211 aa8.78□□□□□ -1
CTR9-202ENST00000524523 SH2B2O14492 632 aaPredicted RBP8.78□□□□□ -1
CTR9-202ENST00000524523 ORC4O43929 436 aa8.78□□□□□ -1
CTR9-202ENST00000524523 SRGNP10124 158 aa8.78□□□□□ -1
CTR9-202ENST00000524523 ABL2P42684 1182 aa8.78□□□□□ -1
CTR9-202ENST00000524523 TDO2P48775 406 aa8.78□□□□□ -1
CTR9-202ENST00000524523 ANTXR2P58335 489 aa8.78□□□□□ -1
CTR9-202ENST00000524523 MECOMQ03112 1051 aa8.78□□□□□ -1
CTR9-202ENST00000524523 APOBRQ0VD83 1088 aa8.78□□□□□ -1
CTR9-202ENST00000524523 CC2D2BQ6DHV5 1058 aa8.78□□□□□ -1
CTR9-202ENST00000524523 MEIOBQ8N635 442 aa8.78□□□□□ -1
CTR9-202ENST00000524523 WASF1Q92558 559 aa8.78□□□□□ -1
CTR9-202ENST00000524523 PURBQ96QR8 312 aaKnown RBP8.78□□□□□ -1
CTR9-202ENST00000524523 COA1Q9GZY4 146 aa8.78□□□□□ -1
CTR9-202ENST00000524523 ARMT1Q9H993 441 aa8.78□□□□□ -1
CTR9-202ENST00000524523 ZNF287Q9HBT7 754 aa8.78□□□□□ -1
CTR9-202ENST00000524523 ZSWIM5Q9P217 1185 aa8.78□□□□□ -1
CTR9-202ENST00000524523 PARP3Q9Y6F1 533 aa8.78□□□□□ -1
CTR9-202ENST00000524523 FAM205AQ6ZU69 1335 aa8.78□□□□□ -1
CTR9-202ENST00000524523 C4AP0C0L4 1744 aa8.77□□□□□ -1
CTR9-202ENST00000524523 RGPD3A6NKT7 1758 aaPredicted RBP8.77□□□□□ -1.01
CTR9-202ENST00000524523 RGPD4Q7Z3J3 1758 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 H3BQV1 296 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 CPLX1O14810 134 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 CTDNEP1O95476 244 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 LDHBP07195 334 aaKnown RBP8.77□□□□□ -1.01
CTR9-202ENST00000524523 CALM1P0DP23 149 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 CALM2P0DP24 149 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 CALM3P0DP25 149 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 FKBP1AP62942 108 aaKnown RBP8.77□□□□□ -1.01
CTR9-202ENST00000524523 PPARAQ07869 468 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 DDR1Q08345 913 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 APOA5Q6Q788 366 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 BRAPQ7Z569 592 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 USP48Q86UV5 1035 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 COL23A1Q86Y22 540 aaPredicted RBP8.77□□□□□ -1.01
CTR9-202ENST00000524523 TBC1D10CQ8IV04 446 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 FAM177A1Q8N128 213 aaPredicted RBP8.77□□□□□ -1.01
CTR9-202ENST00000524523 LCORLQ8N3X6 602 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 MASTLQ96GX5 879 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 ZNF396Q96N95 335 aaPredicted RBP8.77□□□□□ -1.01
CTR9-202ENST00000524523 MAP3K14Q99558 947 aa8.77□□□□□ -1.01
CTR9-202ENST00000524523 TSEN34Q9BSV6 310 aaKnown RBP8.77□□□□□ -1.01
CTR9-202ENST00000524523 EPB41L4AQ9HCS5 686 aaPredicted RBP8.77□□□□□ -1.01
CTR9-202ENST00000524523 CD209Q9NNX6 404 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms