RNA–Protein interactions for RNA: ENST00000524112.1

CSGALNACT1-215, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-215ENST00000524112 KIAA1683Q9H0B3 1180 aa10.58□□□□□ -0.72
CSGALNACT1-215ENST00000524112 BICC1Q9H694 974 aaKnown RBP10.58□□□□□ -0.72
CSGALNACT1-215ENST00000524112 AKAP2Q9Y2D5 859 aa10.58□□□□□ -0.72
CSGALNACT1-215ENST00000524112 PCDHA11Q9Y5I1 949 aa10.58□□□□□ -0.72
CSGALNACT1-215ENST00000524112 TRANK1O15050 2925 aa10.58□□□□□ -0.72
CSGALNACT1-215ENST00000524112 SMIM22K7EJ46 135 aa10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 SLC25A27O95847 323 aa10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 HLA-DOAP06340 250 aa10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 CST5P28325 142 aaPredicted RBP10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 MRE11P49959 708 aa10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 PICALMQ13492 652 aa10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 MVPQ14764 893 aaKnown RBP10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 SUCLG2Q96I99 432 aa10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 PAGR1Q9BTK6 254 aa10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 TANGO6Q9C0B7 1094 aa10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 PRDM12Q9H4Q4 367 aa10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 XPNPEP3Q9NQH7 507 aa10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 DDX4Q9NQI0 724 aaKnown RBP10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 TBX21Q9UL17 535 aa10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 PTPRCP08575 1304 aa10.57□□□□□ -0.72
CSGALNACT1-215ENST00000524112 TCF20Q9UGU0 1960 aaKnown RBP10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 AKR1A1P14550 325 aa10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 IGFBP4P22692 258 aa10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 TMEM240Q5SV17 173 aa10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 ALYREFQ86V81 257 aaKnown RBP10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 RPUSD2Q8IZ73 545 aaKnown RBP10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 CRACR2BQ8N4Y2 399 aaPredicted RBP10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 GLT1D1Q96MS3 346 aa10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 IRF2BPLQ9H1B7 796 aa10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 SPC25Q9HBM1 224 aa10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 STARD7Q9NQZ5 370 aa10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 FLRT1Q9NZU1 646 aa10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 ZBTB21Q9ULJ3 1066 aa10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 CHD9Q3L8U1 2897 aa10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 FOCADQ5VW36 1801 aa10.56□□□□□ -0.72
CSGALNACT1-215ENST00000524112 ZDBF2Q9HCK1 2354 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 A0A1W2PQ45 241 aaPredicted RBP10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 A0A1W2PQY0 241 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 ST18O60284 1047 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 NBPF7P0C2Y1 421 aaPredicted RBP10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 ADORA2AP29274 412 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 CYP2C19P33261 490 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 FAAP100Q0VG06 881 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 COG2Q14746 738 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 CCDC102BQ68D86 513 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 SH3RF1Q7Z6J0 888 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 ANKRD44Q8N8A2 993 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 HLA-CQ95604 372 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 TSR2Q969E8 191 aaKnown RBP10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 EHD4Q9H223 541 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 IL23AQ9NPF7 189 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 ABCF2Q9UG63 623 aa10.55□□□□□ -0.72
CSGALNACT1-215ENST00000524112 PRRC2BQ5JSZ5 2229 aaKnown RBP10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 SMCHD1A6NHR9 2005 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 F6X3S4 739 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 TLL1O43897 1013 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 PQBP1O60828 265 aaKnown RBP10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 CABYRO75952 493 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 FCER1AP12319 257 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 PPP4CP60510 307 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 WDR78Q5VTH9 848 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 TEX11Q8IYF3 940 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 TRPV1Q8NER1 839 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 MS4A3Q96HJ5 214 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 FEZ1Q99689 392 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 EMILIN3Q9NT22 766 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 FAM50BQ9Y247 325 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 CNPY2Q9Y2B0 182 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 FANCIQ9NVI1 1328 aa10.54□□□□□ -0.72
CSGALNACT1-215ENST00000524112 BRWD1Q9NSI6 2320 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 LRRC37A2A6NM11 1700 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 FGBP02675 491 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 ACLYP53396 1101 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 EPHB4P54760 987 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 MECOMQ03112 1051 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 ADGRE1Q14246 886 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 CSPP1Q1MSJ5 1256 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 ASTLQ6HA08 431 aaPredicted RBP10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 SLC4A10Q6U841 1118 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 NPLOC4Q8TAT6 608 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 PHOSPHO2Q8TCD6 241 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 PPM1EQ8WY54 764 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 MAML3Q96JK9 1138 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 SPATC1LQ9H0A9 340 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 SIL1Q9H173 461 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 EPHX3Q9H6B9 360 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 SH2D4AQ9H788 454 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 CHD7Q9P2D1 2997 aa10.53□□□□□ -0.72
CSGALNACT1-215ENST00000524112 XIRP2A4UGR9 3374 aa10.52□□□□□ -0.72
CSGALNACT1-215ENST00000524112 A0A0U1RQG5 324 aaPredicted RBP10.52□□□□□ -0.73
CSGALNACT1-215ENST00000524112 SPDYE16A6NNV3 312 aaPredicted RBP10.52□□□□□ -0.73
CSGALNACT1-215ENST00000524112 DUSP11O75319 330 aaKnown RBP10.52□□□□□ -0.73
CSGALNACT1-215ENST00000524112 CNMDO75829 334 aa10.52□□□□□ -0.73
CSGALNACT1-215ENST00000524112 VCAM1P19320 739 aa10.52□□□□□ -0.73
CSGALNACT1-215ENST00000524112 ITGB8P26012 769 aa10.52□□□□□ -0.73
CSGALNACT1-215ENST00000524112 CDK7P50613 346 aa10.52□□□□□ -0.73
CSGALNACT1-215ENST00000524112 NKX3-2P78367 333 aa10.52□□□□□ -0.73
CSGALNACT1-215ENST00000524112 RASGRF1Q13972 1273 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms