RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 LHX8Q68G74 356 aa22.66■■□□□ 1.22
PTP4A3-206ENST00000524028 C11orf49Q9H6J7 331 aa22.66■■□□□ 1.22
PTP4A3-206ENST00000524028 SLC15A5A6NIM6 579 aa22.65■■□□□ 1.22
PTP4A3-206ENST00000524028 USP17L12C9JPN9 530 aa22.65■■□□□ 1.22
PTP4A3-206ENST00000524028 USP17L21D6R901 530 aa22.65■■□□□ 1.22
PTP4A3-206ENST00000524028 COG2Q14746 738 aa22.65■■□□□ 1.22
PTP4A3-206ENST00000524028 PUS7LQ9H0K6 701 aaKnown RBP22.65■■□□□ 1.22
PTP4A3-206ENST00000524028 GLRX3O76003 335 aaKnown RBP22.64■■□□□ 1.21
PTP4A3-206ENST00000524028 CDK8P49336 464 aa22.64■■□□□ 1.21
PTP4A3-206ENST00000524028 STAP2Q9UGK3 403 aa22.64■■□□□ 1.21
PTP4A3-206ENST00000524028 SLC4A4Q9Y6R1 1079 aa22.64■■□□□ 1.21
PTP4A3-206ENST00000524028 PFASO15067 1338 aa22.63■■□□□ 1.21
PTP4A3-206ENST00000524028 GRB14Q14449 540 aa22.63■■□□□ 1.21
PTP4A3-206ENST00000524028 CTR9Q6PD62 1173 aa22.63■■□□□ 1.21
PTP4A3-206ENST00000524028 C7orf61Q8IZ16 206 aa22.63■■□□□ 1.21
PTP4A3-206ENST00000524028 NPLOC4Q8TAT6 608 aa22.63■■□□□ 1.21
PTP4A3-206ENST00000524028 MOV10L1Q9BXT6 1211 aaKnown RBP22.63■■□□□ 1.21
PTP4A3-206ENST00000524028 TANGO6Q9C0B7 1094 aa22.63■■□□□ 1.21
PTP4A3-206ENST00000524028 HOXC10Q9NYD6 342 aa22.63■■□□□ 1.21
PTP4A3-206ENST00000524028 TMX2Q9Y320 296 aa22.63■■□□□ 1.21
PTP4A3-206ENST00000524028 ALPK3Q96L96 1907 aa22.63■■□□□ 1.21
PTP4A3-206ENST00000524028 HOXC6P09630 235 aa22.62■■□□□ 1.21
PTP4A3-206ENST00000524028 ICA1Q05084 483 aa22.62■■□□□ 1.21
PTP4A3-206ENST00000524028 C16orf86Q6ZW13 317 aa22.62■■□□□ 1.21
PTP4A3-206ENST00000524028 SPICE1Q8N0Z3 855 aa22.62■■□□□ 1.21
PTP4A3-206ENST00000524028 ECHDC1Q9NTX5 307 aa22.62■■□□□ 1.21
PTP4A3-206ENST00000524028 SZT2Q5T011 3432 aa22.62■■□□□ 1.21
PTP4A3-206ENST00000524028 IGHA2P01877 340 aa22.61■■□□□ 1.21
PTP4A3-206ENST00000524028 COL6A1P12109 1028 aa22.61■■□□□ 1.21
PTP4A3-206ENST00000524028 ZSCAN25Q6NSZ9 544 aa22.61■■□□□ 1.21
PTP4A3-206ENST00000524028 CCDC17Q96LX7 622 aa22.61■■□□□ 1.21
PTP4A3-206ENST00000524028 DCTPP1Q9H773 170 aa22.61■■□□□ 1.21
PTP4A3-206ENST00000524028 ZMYND8Q9ULU4 1186 aaPredicted RBP22.61■■□□□ 1.21
PTP4A3-206ENST00000524028 IVNS1ABPQ9Y6Y0 642 aa22.61■■□□□ 1.21
PTP4A3-206ENST00000524028 DSG3P32926 999 aa22.6■■□□□ 1.21
PTP4A3-206ENST00000524028 MFSD14CQ5VZR4 134 aa22.6■■□□□ 1.21
PTP4A3-206ENST00000524028 TSHZ3Q63HK5 1081 aa22.6■■□□□ 1.21
PTP4A3-206ENST00000524028 LPAR1Q92633 364 aa22.6■■□□□ 1.21
PTP4A3-206ENST00000524028 SPATC1LQ9H0A9 340 aa22.6■■□□□ 1.21
PTP4A3-206ENST00000524028 VCPKMTQ9H867 229 aa22.6■■□□□ 1.21
PTP4A3-206ENST00000524028 ARHGEF10LQ9HCE6 1279 aa22.6■■□□□ 1.21
PTP4A3-206ENST00000524028 CYP2C19P33261 490 aa22.59■■□□□ 1.21
PTP4A3-206ENST00000524028 ATP2B2Q01814 1243 aa22.59■■□□□ 1.21
PTP4A3-206ENST00000524028 TRPV1Q8NER1 839 aa22.59■■□□□ 1.21
PTP4A3-206ENST00000524028 ATG4CQ96DT6 458 aa22.59■■□□□ 1.21
PTP4A3-206ENST00000524028 STRBPQ96SI9 672 aaKnown RBP22.59■■□□□ 1.21
PTP4A3-206ENST00000524028 GDF15Q99988 308 aa22.59■■□□□ 1.21
PTP4A3-206ENST00000524028 FLOT1O75955 427 aa22.58■■□□□ 1.21
PTP4A3-206ENST00000524028 EEF2P13639 858 aaKnown RBP22.58■■□□□ 1.21
PTP4A3-206ENST00000524028 SYN1P17600 705 aa22.58■■□□□ 1.21
PTP4A3-206ENST00000524028 ERCC3P19447 782 aa22.58■■□□□ 1.21
PTP4A3-206ENST00000524028 ADORA2AP29274 412 aa22.58■■□□□ 1.21
PTP4A3-206ENST00000524028 AMOTL1Q8IY63 956 aa22.58■■□□□ 1.21
PTP4A3-206ENST00000524028 DDRGK1Q96HY6 314 aa22.58■■□□□ 1.21
PTP4A3-206ENST00000524028 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.58■■□□□ 1.213e-6■□□□□ 10.9
PTP4A3-206ENST00000524028 RLFQ13129 1914 aa22.58■■□□□ 1.21
PTP4A3-206ENST00000524028 BAZ2AQ9UIF9 1905 aaKnown RBP22.58■■□□□ 1.21
PTP4A3-206ENST00000524028 A0A1W2PPC1 479 aa22.57■■□□□ 1.2
PTP4A3-206ENST00000524028 GSG1L2A8MUP6 293 aa22.57■■□□□ 1.2
PTP4A3-206ENST00000524028 KBTBD3Q8NAB2 608 aa22.57■■□□□ 1.2
PTP4A3-206ENST00000524028 SHCBP1Q8NEM2 672 aa22.57■■□□□ 1.2
PTP4A3-206ENST00000524028 OSBP2Q969R2 916 aa22.57■■□□□ 1.2
PTP4A3-206ENST00000524028 SH2D4AQ9H788 454 aa22.57■■□□□ 1.2
PTP4A3-206ENST00000524028 SOX1O00570 391 aaPredicted RBP22.56■■□□□ 1.2
PTP4A3-206ENST00000524028 STRNO43815 780 aa22.56■■□□□ 1.2
PTP4A3-206ENST00000524028 COBLO75128 1261 aa22.56■■□□□ 1.2
PTP4A3-206ENST00000524028 PLS1Q14651 629 aa22.56■■□□□ 1.2
PTP4A3-206ENST00000524028 DPP9Q86TI2 863 aa22.56■■□□□ 1.2
PTP4A3-206ENST00000524028 MB21D1Q8N884 522 aa22.56■■□□□ 1.2
PTP4A3-206ENST00000524028 KANSL2Q9H9L4 492 aa22.56■■□□□ 1.2
PTP4A3-206ENST00000524028 DDX20Q9UHI6 824 aaKnown RBP22.56■■□□□ 1.2
PTP4A3-206ENST00000524028 A0A0G2JMZ2 1700 aa22.56■■□□□ 1.2
PTP4A3-206ENST00000524028 WDR46O15213 610 aaKnown RBP22.55■■□□□ 1.2
PTP4A3-206ENST00000524028 CNGA1P29973 690 aa22.55■■□□□ 1.2
PTP4A3-206ENST00000524028 LRRC26Q2I0M4 334 aa22.55■■□□□ 1.2
PTP4A3-206ENST00000524028 SBK1Q52WX2 424 aa22.55■■□□□ 1.2
PTP4A3-206ENST00000524028 SAMD1Q6SPF0 538 aaPredicted RBP22.55■■□□□ 1.2
PTP4A3-206ENST00000524028 ARPP21Q9UBL0 812 aaPredicted RBP22.55■■□□□ 1.2
PTP4A3-206ENST00000524028 ADAMTS5Q9UNA0 930 aa22.55■■□□□ 1.2
PTP4A3-206ENST00000524028 CYBAP13498 195 aa22.54■■□□□ 1.2
PTP4A3-206ENST00000524028 BMP8BP34820 402 aa22.54■■□□□ 1.2
PTP4A3-206ENST00000524028 TMEM132BQ14DG7 1078 aa22.54■■□□□ 1.2
PTP4A3-206ENST00000524028 OLFML2BQ68BL8 750 aa22.54■■□□□ 1.2
PTP4A3-206ENST00000524028 NCAPG2Q86XI2 1143 aa22.54■■□□□ 1.2
PTP4A3-206ENST00000524028 STK11IPQ8N1F8 1099 aa22.54■■□□□ 1.2
PTP4A3-206ENST00000524028 MROH8Q9H579 483 aa22.54■■□□□ 1.2
PTP4A3-206ENST00000524028 FBXO28Q9NVF7 368 aa22.54■■□□□ 1.2
PTP4A3-206ENST00000524028 PCDHB15Q9Y5E8 787 aa22.54■■□□□ 1.2
PTP4A3-206ENST00000524028 RNF113AO15541 343 aaKnown RBP22.53■■□□□ 1.2
PTP4A3-206ENST00000524028 RASA1P20936 1047 aa22.53■■□□□ 1.2
PTP4A3-206ENST00000524028 APPBP2Q92624 585 aa22.53■■□□□ 1.2
PTP4A3-206ENST00000524028 GPATCH3Q96I76 525 aa22.53■■□□□ 1.2
PTP4A3-206ENST00000524028 MYH7P12883 1935 aa22.53■■□□□ 1.2
PTP4A3-206ENST00000524028 M0R2C6 588 aa22.52■■□□□ 1.2
PTP4A3-206ENST00000524028 MAGEA10P43363 369 aaPredicted RBP22.52■■□□□ 1.2
PTP4A3-206ENST00000524028 GIMAP6Q6P9H5 292 aa22.52■■□□□ 1.2
PTP4A3-206ENST00000524028 LRCH3Q96II8 777 aa22.52■■□□□ 1.2
PTP4A3-206ENST00000524028 EPB41L4AQ9HCS5 686 aaPredicted RBP22.52■■□□□ 1.2
PTP4A3-206ENST00000524028 LAMA3Q16787 3333 aa22.51■■□□□ 1.19
PTP4A3-206ENST00000524028 MINDY4BA8MYZ0 360 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms