RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 GJD2Q9UKL4 321 aa20.59■□□□□ 0.89
CCNC-213ENST00000523541 INHAP05111 366 aa20.58■□□□□ 0.89
CCNC-213ENST00000523541 B4GALNT3Q6L9W6 998 aa20.58■□□□□ 0.89
CCNC-213ENST00000523541 ZNF444Q8N0Y2 327 aaPredicted RBP20.58■□□□□ 0.89
CCNC-213ENST00000523541 SEC62Q99442 399 aaKnown RBP20.58■□□□□ 0.89
CCNC-213ENST00000523541 VCPKMTQ9H867 229 aa20.58■□□□□ 0.89
CCNC-213ENST00000523541 EPB41L4AQ9HCS5 686 aaPredicted RBP20.58■□□□□ 0.89
CCNC-213ENST00000523541 TXNRD2Q9NNW7 524 aa20.58■□□□□ 0.89
CCNC-213ENST00000523541 BAZ2AQ9UIF9 1905 aaKnown RBP20.57■□□□□ 0.88
CCNC-213ENST00000523541 PEX10O60683 326 aa20.57■□□□□ 0.88
CCNC-213ENST00000523541 XRCC5P13010 732 aaKnown RBP20.57■□□□□ 0.88
CCNC-213ENST00000523541 ATP2B2Q01814 1243 aa20.57■□□□□ 0.88
CCNC-213ENST00000523541 PDE4BQ07343 736 aa20.57■□□□□ 0.88
CCNC-213ENST00000523541 WDR78Q5VTH9 848 aa20.57■□□□□ 0.88
CCNC-213ENST00000523541 TRMT44Q8IYL2 757 aaKnown RBP20.57■□□□□ 0.88
CCNC-213ENST00000523541 MB21D1Q8N884 522 aa20.57■□□□□ 0.88
CCNC-213ENST00000523541 SOCS4Q8WXH5 440 aa20.57■□□□□ 0.88
CCNC-213ENST00000523541 NAPBQ9H115 298 aa20.57■□□□□ 0.88
CCNC-213ENST00000523541 SYNPO2Q9UMS6 1093 aa20.57■□□□□ 0.88
CCNC-213ENST00000523541 BRCA2P51587 3418 aa20.57■□□□□ 0.88
CCNC-213ENST00000523541 MYH8P13535 1937 aa20.57■□□□□ 0.88
CCNC-213ENST00000523541 WDR46O15213 610 aaKnown RBP20.56■□□□□ 0.88
CCNC-213ENST00000523541 EEF2P13639 858 aaKnown RBP20.56■□□□□ 0.88
CCNC-213ENST00000523541 RASA1P20936 1047 aa20.56■□□□□ 0.88
CCNC-213ENST00000523541 Q3C1V9 767 aa20.56■□□□□ 0.88
CCNC-213ENST00000523541 PLEKHM2Q8IWE5 1019 aa20.56■□□□□ 0.88
CCNC-213ENST00000523541 STK11IPQ8N1F8 1099 aa20.56■□□□□ 0.88
CCNC-213ENST00000523541 NUDT12Q9BQG2 462 aa20.56■□□□□ 0.88
CCNC-213ENST00000523541 TANGO6Q9C0B7 1094 aa20.56■□□□□ 0.88
CCNC-213ENST00000523541 UNC93B1Q9H1C4 597 aa20.56■□□□□ 0.88
CCNC-213ENST00000523541 GOPCQ9HD26 462 aa20.56■□□□□ 0.88
CCNC-213ENST00000523541 NYAP2Q9P242 653 aa20.56■□□□□ 0.88
CCNC-213ENST00000523541 SMIM22K7EJ46 135 aa20.55■□□□□ 0.88
CCNC-213ENST00000523541 RAD21O60216 631 aa20.55■□□□□ 0.88
CCNC-213ENST00000523541 GJB1P08034 283 aa20.55■□□□□ 0.88
CCNC-213ENST00000523541 ALX1Q15699 326 aa20.55■□□□□ 0.88
CCNC-213ENST00000523541 MCMDC2Q4G0Z9 681 aa20.55■□□□□ 0.88
CCNC-213ENST00000523541 PPP4R3BQ5MIZ7 849 aa20.55■□□□□ 0.88
CCNC-213ENST00000523541 SAMD1Q6SPF0 538 aaPredicted RBP20.55■□□□□ 0.88
CCNC-213ENST00000523541 SPDYE16A6NNV3 312 aaPredicted RBP20.54■□□□□ 0.88
CCNC-213ENST00000523541 TRIM6-TRIM34B2RNG4 842 aa20.54■□□□□ 0.88
CCNC-213ENST00000523541 CYP2B6P20813 491 aa20.54■□□□□ 0.88
CCNC-213ENST00000523541 MFAP1P55081 439 aaKnown RBP20.54■□□□□ 0.88
CCNC-213ENST00000523541 POTEEQ6S8J3 1075 aa20.54■□□□□ 0.88
CCNC-213ENST00000523541 PLEKHH3Q7Z736 793 aa20.54■□□□□ 0.88
CCNC-213ENST00000523541 MKL1Q969V6 931 aa20.54■□□□□ 0.88
CCNC-213ENST00000523541 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.54■□□□□ 0.88
CCNC-213ENST00000523541 CNMDO75829 334 aa20.53■□□□□ 0.88
CCNC-213ENST00000523541 TFRCP02786 760 aaKnown RBP20.53■□□□□ 0.88
CCNC-213ENST00000523541 HMGCRP04035 888 aa20.53■□□□□ 0.88
CCNC-213ENST00000523541 DSG3P32926 999 aa20.53■□□□□ 0.88
CCNC-213ENST00000523541 GJA8P48165 433 aa20.53■□□□□ 0.88
CCNC-213ENST00000523541 PPARAQ07869 468 aa20.53■□□□□ 0.88
CCNC-213ENST00000523541 GPR142Q7Z601 462 aa20.53■□□□□ 0.88
CCNC-213ENST00000523541 U2AF1L4Q8WU68 220 aaKnown RBP20.53■□□□□ 0.88
CCNC-213ENST00000523541 ANAPC4Q9UJX5 808 aa20.53■□□□□ 0.88
CCNC-213ENST00000523541 HIP1O00291 1037 aa20.52■□□□□ 0.88
CCNC-213ENST00000523541 STRNO43815 780 aa20.52■□□□□ 0.88
CCNC-213ENST00000523541 MORN1Q5T089 497 aa20.52■□□□□ 0.88
CCNC-213ENST00000523541 CLEC10AQ8IUN9 316 aa20.52■□□□□ 0.88
CCNC-213ENST00000523541 USP6NLQ92738 828 aa20.52■□□□□ 0.88
CCNC-213ENST00000523541 DEFB118Q96PH6 123 aa20.52■□□□□ 0.88
CCNC-213ENST00000523541 PORCNQ9H237 461 aa20.52■□□□□ 0.88
CCNC-213ENST00000523541 IGKV6D-41A0A0C4DH26 115 aa20.51■□□□□ 0.87
CCNC-213ENST00000523541 RGS2P41220 211 aa20.51■□□□□ 0.87
CCNC-213ENST00000523541 SPICE1Q8N0Z3 855 aa20.51■□□□□ 0.87
CCNC-213ENST00000523541 SHCBP1Q8NEM2 672 aa20.51■□□□□ 0.87
CCNC-213ENST00000523541 NEDD1Q8NHV4 660 aa20.51■□□□□ 0.87
CCNC-213ENST00000523541 RILPL2Q969X0 211 aa20.51■□□□□ 0.87
CCNC-213ENST00000523541 SHISA4Q96DD7 197 aa20.51■□□□□ 0.87
CCNC-213ENST00000523541 BTBD7Q9P203 1132 aa20.51■□□□□ 0.87
CCNC-213ENST00000523541 ADAMTS5Q9UNA0 930 aa20.51■□□□□ 0.87
CCNC-213ENST00000523541 IVNS1ABPQ9Y6Y0 642 aa20.51■□□□□ 0.87
CCNC-213ENST00000523541 MKI67P46013 3256 aaKnown RBP20.51■□□□□ 0.87
CCNC-213ENST00000523541 SLC15A5A6NIM6 579 aa20.5■□□□□ 0.87
CCNC-213ENST00000523541 FLOT1O75955 427 aa20.5■□□□□ 0.87
CCNC-213ENST00000523541 SGPL1O95470 568 aa20.5■□□□□ 0.87
CCNC-213ENST00000523541 KIAA1755Q5JYT7 1200 aa20.5■□□□□ 0.87
CCNC-213ENST00000523541 DPF3Q92784 378 aa20.5■□□□□ 0.87
CCNC-213ENST00000523541 MTMR4Q9NYA4 1195 aa20.5■□□□□ 0.87
CCNC-213ENST00000523541 ZMYM6O95789 1325 aa20.5■□□□□ 0.87
CCNC-213ENST00000523541 DOCK3Q8IZD9 2030 aa20.49■□□□□ 0.87
CCNC-213ENST00000523541 FOXP2O15409 715 aa20.49■□□□□ 0.87
CCNC-213ENST00000523541 FARP2O94887 1054 aaPredicted RBP20.49■□□□□ 0.87
CCNC-213ENST00000523541 TTLL1O95922 423 aa20.49■□□□□ 0.87
CCNC-213ENST00000523541 TSPY3P0CV98 308 aa20.49■□□□□ 0.87
CCNC-213ENST00000523541 TSPY8P0CW00 308 aa20.49■□□□□ 0.87
CCNC-213ENST00000523541 ZKSCAN1P17029 563 aaPredicted RBP20.49■□□□□ 0.87
CCNC-213ENST00000523541 SDSP20132 328 aa20.49■□□□□ 0.87
CCNC-213ENST00000523541 PTPREP23469 700 aa20.49■□□□□ 0.87
CCNC-213ENST00000523541 NT5C2P49902 561 aa20.49■□□□□ 0.87
CCNC-213ENST00000523541 SPATC1LQ9H0A9 340 aa20.49■□□□□ 0.87
CCNC-213ENST00000523541 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.49■□□□□ 0.87
CCNC-213ENST00000523541 MROH8Q9H579 483 aa20.49■□□□□ 0.87
CCNC-213ENST00000523541 HMX1Q9NP08 348 aaPredicted RBP20.49■□□□□ 0.87
CCNC-213ENST00000523541 PAK6Q9NQU5 681 aaPredicted RBP20.49■□□□□ 0.87
CCNC-213ENST00000523541 CLIP2Q9UDT6 1046 aa20.49■□□□□ 0.87
CCNC-213ENST00000523541 RPTORQ8N122 1335 aa20.49■□□□□ 0.87
CCNC-213ENST00000523541 PLIN4Q96Q06 1357 aa20.48■□□□□ 0.87
CCNC-213ENST00000523541 F5H6K3 240 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms