RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 CCDC17Q96LX7 622 aa11.38□□□□□ -0.59
SDC2-207ENST00000522911 FLRT1Q9NZU1 646 aa11.38□□□□□ -0.59
SDC2-207ENST00000522911 DDX20Q9UHI6 824 aaKnown RBP11.38□□□□□ -0.59
SDC2-207ENST00000522911 ZMYND8Q9ULU4 1186 aaPredicted RBP11.38□□□□□ -0.59
SDC2-207ENST00000522911 NDUFB9Q9Y6M9 179 aa11.38□□□□□ -0.59
SDC2-207ENST00000522911 A0A1W2PRG0 241 aa11.37□□□□□ -0.59
SDC2-207ENST00000522911 HMMRO75330 724 aa11.37□□□□□ -0.59
SDC2-207ENST00000522911 POLR3DP05423 398 aaPredicted RBP11.37□□□□□ -0.59
SDC2-207ENST00000522911 ATP2B2Q01814 1243 aa11.37□□□□□ -0.59
SDC2-207ENST00000522911 C1orf53Q5VUE5 145 aa11.37□□□□□ -0.59
SDC2-207ENST00000522911 SPATC1LQ9H0A9 340 aa11.37□□□□□ -0.59
SDC2-207ENST00000522911 CHMP4BQ9H444 224 aaKnown RBP11.37□□□□□ -0.59
SDC2-207ENST00000522911 MROH8Q9H579 483 aa11.37□□□□□ -0.59
SDC2-207ENST00000522911 SH2D4AQ9H788 454 aa11.37□□□□□ -0.59
SDC2-207ENST00000522911 CWC22Q9HCG8 908 aaKnown RBP11.37□□□□□ -0.59
SDC2-207ENST00000522911 ZBTB40Q9NUA8 1239 aa11.37□□□□□ -0.59
SDC2-207ENST00000522911 MCM9Q9NXL9 1143 aa11.37□□□□□ -0.59
SDC2-207ENST00000522911 NRBP1Q9UHY1 535 aa11.37□□□□□ -0.59
SDC2-207ENST00000522911 TMX2Q9Y320 296 aa11.37□□□□□ -0.59
SDC2-207ENST00000522911 ZNF532Q9HCE3 1301 aa11.36□□□□□ -0.59
SDC2-207ENST00000522911 ATP5JP18859 108 aa11.36□□□□□ -0.59
SDC2-207ENST00000522911 SNX17Q15036 470 aa11.36□□□□□ -0.59
SDC2-207ENST00000522911 ZYXQ15942 572 aaKnown RBP11.36□□□□□ -0.59
SDC2-207ENST00000522911 SIRT2Q8IXJ6 389 aa11.36□□□□□ -0.59
SDC2-207ENST00000522911 NPLOC4Q8TAT6 608 aa11.36□□□□□ -0.59
SDC2-207ENST00000522911 MOV10L1Q9BXT6 1211 aaKnown RBP11.36□□□□□ -0.59
SDC2-207ENST00000522911 UBE2OQ9C0C9 1292 aaKnown RBP11.36□□□□□ -0.59
SDC2-207ENST00000522911 SLC5A4Q9NY91 659 aa11.36□□□□□ -0.59
SDC2-207ENST00000522911 DDX19BQ9UMR2 479 aa11.36□□□□□ -0.59
SDC2-207ENST00000522911 ADAMTS5Q9UNA0 930 aa11.36□□□□□ -0.59
SDC2-207ENST00000522911 STXBP5LQ9Y2K9 1186 aa11.36□□□□□ -0.59
SDC2-207ENST00000522911 RLFQ13129 1914 aa11.36□□□□□ -0.59
SDC2-207ENST00000522911 ROBO3Q96MS0 1386 aa11.36□□□□□ -0.59
SDC2-207ENST00000522911 NAV1Q8NEY1 1877 aa11.36□□□□□ -0.59
SDC2-207ENST00000522911 FRMPD3Q5JV73 1810 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 WDR46O15213 610 aaKnown RBP11.35□□□□□ -0.59
SDC2-207ENST00000522911 SEPT4O43236 478 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 IFIT2P09913 472 aaKnown RBP11.35□□□□□ -0.59
SDC2-207ENST00000522911 SYN1P17600 705 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 ADORA2AP29274 412 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 DSG3P32926 999 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 ADD2P35612 726 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 UBE3CQ15386 1083 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 C12orf60Q5U649 245 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 SIAH1Q8IUQ4 282 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 LCORLQ8N3X6 602 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 DEFB123Q8N688 67 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 ARRDC4Q8NCT1 418 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 TRPV1Q8NER1 839 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 PANK1Q8TE04 598 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 HAUS7Q99871 368 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 VCPKMTQ9H867 229 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 ARHGEF10LQ9HCE6 1279 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 IL1RAPL2Q9NP60 686 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 MTMR10Q9NXD2 777 aa11.35□□□□□ -0.59
SDC2-207ENST00000522911 CUL9Q8IWT3 2517 aa11.34□□□□□ -0.59
SDC2-207ENST00000522911 VCANP13611 3396 aa11.34□□□□□ -0.59
SDC2-207ENST00000522911 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
SDC2-207ENST00000522911 GOLIM4O00461 696 aa11.34□□□□□ -0.59
SDC2-207ENST00000522911 SLC25A27O95847 323 aa11.34□□□□□ -0.59
SDC2-207ENST00000522911 ERCC3P19447 782 aa11.34□□□□□ -0.59
SDC2-207ENST00000522911 C16orf86Q6ZW13 317 aa11.34□□□□□ -0.59
SDC2-207ENST00000522911 DPP9Q86TI2 863 aa11.34□□□□□ -0.59
SDC2-207ENST00000522911 SLC17A8Q8NDX2 589 aa11.34□□□□□ -0.59
SDC2-207ENST00000522911 SDR42E1Q8WUS8 393 aa11.34□□□□□ -0.59
SDC2-207ENST00000522911 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.34□□□□□ -0.59
SDC2-207ENST00000522911 PAG1Q9NWQ8 432 aa11.34□□□□□ -0.59
SDC2-207ENST00000522911 DIS3Q9Y2L1 958 aaKnown RBP11.34□□□□□ -0.59
SDC2-207ENST00000522911 CDH23Q9H251 3354 aa11.34□□□□□ -0.59
SDC2-207ENST00000522911 EYSQ5T1H1 3165 aa11.33□□□□□ -0.6
SDC2-207ENST00000522911 CYP2C19P33261 490 aa11.33□□□□□ -0.6
SDC2-207ENST00000522911 COPB2P35606 906 aa11.33□□□□□ -0.6
SDC2-207ENST00000522911 ICA1Q05084 483 aa11.33□□□□□ -0.6
SDC2-207ENST00000522911 KIAA1755Q5JYT7 1200 aa11.33□□□□□ -0.6
SDC2-207ENST00000522911 GIMAP6Q6P9H5 292 aa11.33□□□□□ -0.6
SDC2-207ENST00000522911 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.33□□□□□ -0.6
SDC2-207ENST00000522911 TANGO6Q9C0B7 1094 aa11.33□□□□□ -0.6
SDC2-207ENST00000522911 SENP6Q9GZR1 1112 aaPredicted RBP11.33□□□□□ -0.6
SDC2-207ENST00000522911 KANSL2Q9H9L4 492 aa11.33□□□□□ -0.6
SDC2-207ENST00000522911 MPHOSPH10O00566 681 aaKnown RBP11.32□□□□□ -0.6
SDC2-207ENST00000522911 COBLO75128 1261 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 FLOT1O75955 427 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 FCER1AP12319 257 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 CDK8P49336 464 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 EVX2Q03828 476 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 WDR78Q5VTH9 848 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 ZSCAN25Q6NSZ9 544 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 RIOX2Q8IUF8 465 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 AMOTL1Q8IY63 956 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 MSL3Q8N5Y2 521 aaKnown RBP11.32□□□□□ -0.6
SDC2-207ENST00000522911 SLC44A5Q8NCS7 719 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 MAML3Q96JK9 1138 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 DNAJC2Q99543 621 aaKnown RBP11.32□□□□□ -0.6
SDC2-207ENST00000522911 LBHD1Q9BQE6 289 aaPredicted RBP11.32□□□□□ -0.6
SDC2-207ENST00000522911 ARMT1Q9H993 441 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 SYNPO2Q9UMS6 1093 aa11.32□□□□□ -0.6
SDC2-207ENST00000522911 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
SDC2-207ENST00000522911 SPTBN5Q9NRC6 3674 aaKnown RBP11.31□□□□□ -0.6
SDC2-207ENST00000522911 USP17L12C9JPN9 530 aa11.31□□□□□ -0.6
SDC2-207ENST00000522911 KBTBD13C9JR72 458 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms