RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NOX5Q96PH1 765 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 MTUS1Q9ULD2 1270 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 AK9Q5TCS8 1911 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 A0A087WWV3 80 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 NF2P35240 595 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 ARID5BQ14865 1188 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 C6orf163Q5TEZ5 329 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 TCHPQ9BT92 498 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.4■□□□□ 0.06
SYNPO-205ENST00000522122 RIMBP2O15034 1052 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 CALCOCO2Q13137 446 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.4■□□□□ 0.06
SYNPO-205ENST00000522122 FERMT1Q9BQL6 677 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 CTIFO43310 598 aaKnown RBP15.4■□□□□ 0.06
SYNPO-205ENST00000522122 EEF2P13639 858 aaKnown RBP15.4■□□□□ 0.06
SYNPO-205ENST00000522122 PDE6AP16499 860 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 ARID4AP29374 1257 aaPredicted RBP15.4■□□□□ 0.06
SYNPO-205ENST00000522122 PLCB3Q01970 1234 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 LONRF3Q496Y0 759 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 IFNL3Q8IZI9 196 aa15.4■□□□□ 0.06
SYNPO-205ENST00000522122 SPATA31D1Q6ZQQ2 1576 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 SMIM23A6NLE4 172 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 TTC31Q49AM3 519 aaPredicted RBP15.39■□□□□ 0.05
SYNPO-205ENST00000522122 GSTA5Q7RTV2 222 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 VSTM4Q8IW00 320 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 BLZF1Q9H2G9 400 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 PPARAQ07869 468 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 HAUS3Q68CZ6 603 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 MSL1Q68DK7 614 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 PPP1R14CQ8TAE6 165 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 IQCGQ9H095 443 aaKnown RBP15.39■□□□□ 0.05
SYNPO-205ENST00000522122 FRMD4BQ9Y2L6 1034 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 GNPATO15228 680 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 IGKV5-2P06315 115 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 GJC1P36383 396 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 WHAMMP3Q1A5X7 153 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 FANCBQ8NB91 859 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 SNX29Q8TEQ0 813 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 UBLCP1Q8WVY7 318 aaPredicted RBP15.39■□□□□ 0.05
SYNPO-205ENST00000522122 CCDC114Q96M63 670 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 CDCA7Q9BWT1 371 aaPredicted RBP15.39■□□□□ 0.05
SYNPO-205ENST00000522122 ATG3Q9NT62 314 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 CCDC87Q9NVE4 849 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 CEP170BQ9Y4F5 1589 aaPredicted RBP15.39■□□□□ 0.05
SYNPO-205ENST00000522122 STAMBPO95630 424 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 GLT8D2Q9H1C3 349 aa15.39■□□□□ 0.05
SYNPO-205ENST00000522122 BTBD18B2RXH4 712 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 PLS1Q14651 629 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 CCDC25Q86WR0 208 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 CLIC6Q96NY7 704 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 LZTS2Q9BRK4 669 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 FUCA2Q9BTY2 467 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 CTSWP56202 376 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 TFAP4Q01664 338 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 HERC4Q5GLZ8 1057 aaPredicted RBP15.38■□□□□ 0.05
SYNPO-205ENST00000522122 CERS3Q8IU89 383 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 FMR1NBQ8N0W7 255 aaPredicted RBP15.38■□□□□ 0.05
SYNPO-205ENST00000522122 OR8K1Q8NGG5 319 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 NAP1L3Q99457 506 aaPredicted RBP15.38■□□□□ 0.05
SYNPO-205ENST00000522122 GOLGA6CA6NDK9 693 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 GOLGA6DP0CG33 693 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 IFT20Q8IY31 132 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 RABGGTAQ92696 567 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 GOLGA6AQ9NYA3 693 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.38■□□□□ 0.05
SYNPO-205ENST00000522122 CLCN6P51797 869 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 RNASE9P60153 205 aaKnown RBP15.38■□□□□ 0.05
SYNPO-205ENST00000522122 CABP7Q86V35 215 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 CCDC50Q8IVM0 306 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 TFCP2L1Q9NZI6 479 aa15.38■□□□□ 0.05
SYNPO-205ENST00000522122 MORC2Q9Y6X9 1032 aaPredicted RBP15.38■□□□□ 0.05
SYNPO-205ENST00000522122 A6NNZ2 444 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 NDUFAB1O14561 156 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 UFL1O94874 794 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 TUBB8Q3ZCM7 444 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 CNBD1Q8NA66 436 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 EYA3Q99504 573 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 USP27XA6NNY8 438 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 USP17L12C9JPN9 530 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 USP17L21D6R901 530 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 TTLL12Q14166 644 aaPredicted RBP15.37■□□□□ 0.05
SYNPO-205ENST00000522122 PPP1R7Q15435 360 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 DYMQ7RTS9 669 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 EIF6P56537 245 aaKnown RBP15.37■□□□□ 0.05
SYNPO-205ENST00000522122 ASIC2Q16515 512 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 TNFAIP3P21580 790 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 EPHA10Q5JZY3 1008 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 B4GALNT4Q76KP1 1039 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 CMTR1Q8N1G2 835 aaKnown RBP15.37■□□□□ 0.05
SYNPO-205ENST00000522122 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
SYNPO-205ENST00000522122 IL17RAQ96F46 866 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 C8orf37Q96NL8 207 aa15.37■□□□□ 0.05
SYNPO-205ENST00000522122 PCCAP05165 728 aaPredicted RBP15.36■□□□□ 0.05
SYNPO-205ENST00000522122 ZNF827Q17R98 1081 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 USPL1Q5W0Q7 1092 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 ZNF710Q8N1W2 664 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 DESI2Q9BSY9 194 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 GOLGA6BA6NDN3 693 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 HSPA2P54652 639 aa15.36■□□□□ 0.05
SYNPO-205ENST00000522122 TERF2Q15554 542 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms