RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 BADQ92934 168 aa13.94□□□□□ -0.18
MRPS28-206ENST00000520946 FERMT2Q96AC1 680 aa13.94□□□□□ -0.18
MRPS28-206ENST00000520946 CDX2Q99626 313 aaPredicted RBP13.94□□□□□ -0.18
MRPS28-206ENST00000520946 MOV10L1Q9BXT6 1211 aaKnown RBP13.94□□□□□ -0.18
MRPS28-206ENST00000520946 SPATC1LQ9H0A9 340 aa13.94□□□□□ -0.18
MRPS28-206ENST00000520946 MROH8Q9H579 483 aa13.94□□□□□ -0.18
MRPS28-206ENST00000520946 SH2D4AQ9H788 454 aa13.94□□□□□ -0.18
MRPS28-206ENST00000520946 ARHGEF10LQ9HCE6 1279 aa13.94□□□□□ -0.18
MRPS28-206ENST00000520946 TLR7Q9NYK1 1049 aaKnown RBP13.94□□□□□ -0.18
MRPS28-206ENST00000520946 SIPA1L1O43166 1804 aa13.93□□□□□ -0.18
MRPS28-206ENST00000520946 FCER1AP12319 257 aa13.93□□□□□ -0.18
MRPS28-206ENST00000520946 SHMT1P34896 483 aa13.93□□□□□ -0.18
MRPS28-206ENST00000520946 ADCYAP1R1P41586 468 aa13.93□□□□□ -0.18
MRPS28-206ENST00000520946 PLCD1P51178 756 aa13.93□□□□□ -0.18
MRPS28-206ENST00000520946 TRIM60Q495X7 471 aa13.93□□□□□ -0.18
MRPS28-206ENST00000520946 SHCBP1Q8NEM2 672 aa13.93□□□□□ -0.18
MRPS28-206ENST00000520946 EAF2Q96CJ1 260 aaPredicted RBP13.93□□□□□ -0.18
MRPS28-206ENST00000520946 SEMA6BQ9H3T3 888 aa13.93□□□□□ -0.18
MRPS28-206ENST00000520946 MYH1P12882 1939 aa13.93□□□□□ -0.18
MRPS28-206ENST00000520946 RAD21O60216 631 aa13.92□□□□□ -0.18
MRPS28-206ENST00000520946 RARBP10826 455 aa13.92□□□□□ -0.18
MRPS28-206ENST00000520946 PRAMEF19Q5SWL8 479 aa13.92□□□□□ -0.18
MRPS28-206ENST00000520946 SLC9C2Q5TAH2 1124 aa13.92□□□□□ -0.18
MRPS28-206ENST00000520946 TRPV1Q8NER1 839 aa13.92□□□□□ -0.18
MRPS28-206ENST00000520946 DDRGK1Q96HY6 314 aa13.92□□□□□ -0.18
MRPS28-206ENST00000520946 ANTXR1Q9H6X2 564 aa13.92□□□□□ -0.18
MRPS28-206ENST00000520946 NOP58Q9Y2X3 529 aaKnown RBP13.92□□□□□ -0.18
MRPS28-206ENST00000520946 FOSL2P15408 326 aa13.91□□□□□ -0.18
MRPS28-206ENST00000520946 RAG1P15918 1043 aa13.91□□□□□ -0.18
MRPS28-206ENST00000520946 SMAD3P84022 425 aaKnown RBP13.91□□□□□ -0.18
MRPS28-206ENST00000520946 HSP90AB4PQ58FF6 505 aa13.91□□□□□ -0.18
MRPS28-206ENST00000520946 TMEM179Q6ZVK1 233 aa13.91□□□□□ -0.18
MRPS28-206ENST00000520946 RNF180Q86T96 592 aa13.91□□□□□ -0.18
MRPS28-206ENST00000520946 SPICE1Q8N0Z3 855 aa13.91□□□□□ -0.18
MRPS28-206ENST00000520946 RNPC3Q96LT9 517 aaKnown RBP13.91□□□□□ -0.18
MRPS28-206ENST00000520946 SWAP70Q9UH65 585 aa13.91□□□□□ -0.18
MRPS28-206ENST00000520946 TACC3Q9Y6A5 838 aa13.91□□□□□ -0.18
MRPS28-206ENST00000520946 FOCADQ5VW36 1801 aa13.9□□□□□ -0.18
MRPS28-206ENST00000520946 COBLO75128 1261 aa13.9□□□□□ -0.18
MRPS28-206ENST00000520946 SLC25A27O95847 323 aa13.9□□□□□ -0.18
MRPS28-206ENST00000520946 DSG3P32926 999 aa13.9□□□□□ -0.18
MRPS28-206ENST00000520946 KCTD2Q14681 263 aa13.9□□□□□ -0.18
MRPS28-206ENST00000520946 LRRC41Q15345 812 aa13.9□□□□□ -0.18
MRPS28-206ENST00000520946 C9orf50Q5SZB4 431 aa13.9□□□□□ -0.18
MRPS28-206ENST00000520946 ABRAQ8N0Z2 381 aa13.9□□□□□ -0.18
MRPS28-206ENST00000520946 MYLIPQ8WY64 445 aa13.9□□□□□ -0.18
MRPS28-206ENST00000520946 SYMPKQ92797 1274 aaKnown RBP13.9□□□□□ -0.18
MRPS28-206ENST00000520946 MMP19Q99542 508 aa13.9□□□□□ -0.18
MRPS28-206ENST00000520946 DNAJC2Q99543 621 aaKnown RBP13.9□□□□□ -0.18
MRPS28-206ENST00000520946 XPNPEP3Q9NQH7 507 aa13.9□□□□□ -0.18
MRPS28-206ENST00000520946 CDK5RAP2Q96SN8 1893 aa13.9□□□□□ -0.18
MRPS28-206ENST00000520946 CLTBP09497 229 aa13.89□□□□□ -0.19
MRPS28-206ENST00000520946 GUCY1A2P33402 732 aa13.89□□□□□ -0.19
MRPS28-206ENST00000520946 TLE2Q04725 743 aa13.89□□□□□ -0.19
MRPS28-206ENST00000520946 ICA1Q05084 483 aa13.89□□□□□ -0.19
MRPS28-206ENST00000520946 RIOK1Q9BRS2 568 aaKnown RBP13.89□□□□□ -0.19
MRPS28-206ENST00000520946 PDLIM7Q9NR12 457 aa13.89□□□□□ -0.19
MRPS28-206ENST00000520946 CNPY2Q9Y2B0 182 aa13.89□□□□□ -0.19
MRPS28-206ENST00000520946 EXOC6BQ9Y2D4 811 aa13.89□□□□□ -0.19
MRPS28-206ENST00000520946 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
MRPS28-206ENST00000520946 CUL9Q8IWT3 2517 aa13.88□□□□□ -0.19
MRPS28-206ENST00000520946 A0A1W2PRG0 241 aa13.88□□□□□ -0.19
MRPS28-206ENST00000520946 APBB1O00213 710 aa13.88□□□□□ -0.19
MRPS28-206ENST00000520946 PQBP1O60828 265 aaKnown RBP13.88□□□□□ -0.19
MRPS28-206ENST00000520946 IFIT2P09913 472 aaKnown RBP13.88□□□□□ -0.19
MRPS28-206ENST00000520946 PDE6AP16499 860 aa13.88□□□□□ -0.19
MRPS28-206ENST00000520946 FAM47AQ5JRC9 791 aa13.88□□□□□ -0.19
MRPS28-206ENST00000520946 CLASRPQ8N2M8 674 aaKnown RBP13.88□□□□□ -0.19
MRPS28-206ENST00000520946 SDR42E1Q8WUS8 393 aa13.88□□□□□ -0.19
MRPS28-206ENST00000520946 VTI1AQ96AJ9 217 aa13.88□□□□□ -0.19
MRPS28-206ENST00000520946 ATG4CQ96DT6 458 aa13.88□□□□□ -0.19
MRPS28-206ENST00000520946 MAML3Q96JK9 1138 aa13.88□□□□□ -0.19
MRPS28-206ENST00000520946 TMEM39AQ9NV64 488 aa13.88□□□□□ -0.19
MRPS28-206ENST00000520946 MYO5AQ9Y4I1 1855 aaKnown RBP13.88□□□□□ -0.19
MRPS28-206ENST00000520946 ZNF532Q9HCE3 1301 aa13.88□□□□□ -0.19
MRPS28-206ENST00000520946 FRMPD3Q5JV73 1810 aa13.87□□□□□ -0.19
MRPS28-206ENST00000520946 TRIM43BA6NCK2 446 aa13.87□□□□□ -0.19
MRPS28-206ENST00000520946 DCDC2CA8MYV0 355 aa13.87□□□□□ -0.19
MRPS28-206ENST00000520946 GOLIM4O00461 696 aa13.87□□□□□ -0.19
MRPS28-206ENST00000520946 WDR46O15213 610 aaKnown RBP13.87□□□□□ -0.19
MRPS28-206ENST00000520946 FPGSQ05932 587 aa13.87□□□□□ -0.19
MRPS28-206ENST00000520946 GABPAQ06546 454 aa13.87□□□□□ -0.19
MRPS28-206ENST00000520946 SH3RF1Q7Z6J0 888 aa13.87□□□□□ -0.19
MRPS28-206ENST00000520946 TRIM43Q96BQ3 446 aaPredicted RBP13.87□□□□□ -0.19
MRPS28-206ENST00000520946 CCDC17Q96LX7 622 aa13.87□□□□□ -0.19
MRPS28-206ENST00000520946 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.87□□□□□ -0.19
MRPS28-206ENST00000520946 VCPKMTQ9H867 229 aa13.87□□□□□ -0.19
MRPS28-206ENST00000520946 GOPCQ9HD26 462 aa13.87□□□□□ -0.19
MRPS28-206ENST00000520946 IL1RAPL2Q9NP60 686 aa13.87□□□□□ -0.19
MRPS28-206ENST00000520946 DCP1AQ9NPI6 582 aaPredicted RBP13.87□□□□□ -0.19
MRPS28-206ENST00000520946 NRBP1Q9UHY1 535 aa13.87□□□□□ -0.19
MRPS28-206ENST00000520946 COL6A3P12111 3177 aa13.86□□□□□ -0.19
MRPS28-206ENST00000520946 LAMA3Q16787 3333 aa13.86□□□□□ -0.19
MRPS28-206ENST00000520946 CCER2I3L3R5 266 aa13.86□□□□□ -0.19
MRPS28-206ENST00000520946 PGK1P00558 417 aa13.86□□□□□ -0.19
MRPS28-206ENST00000520946 PGK2P07205 417 aa13.86□□□□□ -0.19
MRPS28-206ENST00000520946 CYP2D6P10635 497 aa13.86□□□□□ -0.19
MRPS28-206ENST00000520946 AKR1A1P14550 325 aa13.86□□□□□ -0.19
MRPS28-206ENST00000520946 COPB2P35606 906 aa13.86□□□□□ -0.19
MRPS28-206ENST00000520946 STAT3P40763 770 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms