RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 GNPTABQ3T906 1256 aa6.87□□□□□ -1.31
SQLE-202ENST00000518604 ANKRD39Q53RE8 183 aa6.87□□□□□ -1.31
SQLE-202ENST00000518604 LARP1BQ659C4 914 aaKnown RBP6.87□□□□□ -1.31
SQLE-202ENST00000518604 VHLLQ6RSH7 139 aa6.87□□□□□ -1.31
SQLE-202ENST00000518604 ZNF765Q7L2R6 523 aa6.87□□□□□ -1.31
SQLE-202ENST00000518604 DPH6Q7L8W6 267 aa6.87□□□□□ -1.31
SQLE-202ENST00000518604 FAM178BQ8IXR5 827 aa6.87□□□□□ -1.31
SQLE-202ENST00000518604 SHKBP1Q8TBC3 707 aa6.87□□□□□ -1.31
SQLE-202ENST00000518604 CCDC113Q9H0I3 377 aa6.87□□□□□ -1.31
SQLE-202ENST00000518604 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.86□□□□□ -1.31
SQLE-202ENST00000518604 DDAH1O94760 285 aa6.86□□□□□ -1.31
SQLE-202ENST00000518604 ZNF865P0CJ78 1059 aaPredicted RBP6.86□□□□□ -1.31
SQLE-202ENST00000518604 ZNF143P52747 638 aaPredicted RBP6.86□□□□□ -1.31
SQLE-202ENST00000518604 NFE2L2Q16236 605 aa6.86□□□□□ -1.31
SQLE-202ENST00000518604 HEXIM2Q96MH2 286 aaKnown RBP6.86□□□□□ -1.31
SQLE-202ENST00000518604 KCNH3Q9ULD8 1083 aa6.86□□□□□ -1.31
SQLE-202ENST00000518604 MSRB2Q9Y3D2 182 aa6.86□□□□□ -1.31
SQLE-202ENST00000518604 GNAT3A8MTJ3 354 aa6.85□□□□□ -1.31
SQLE-202ENST00000518604 NAT2P11245 290 aa6.85□□□□□ -1.31
SQLE-202ENST00000518604 CCDC144BQ3MJ40 725 aa6.85□□□□□ -1.31
SQLE-202ENST00000518604 ZDHHC13Q8IUH4 622 aa6.85□□□□□ -1.31
SQLE-202ENST00000518604 SHISA5Q8N114 240 aa6.85□□□□□ -1.31
SQLE-202ENST00000518604 CELF2-AS1Q8N7Q2 184 aa6.85□□□□□ -1.31
SQLE-202ENST00000518604 PIWIL2Q8TC59 973 aaKnown RBP6.85□□□□□ -1.31
SQLE-202ENST00000518604 PRR13Q9NZ81 148 aa6.85□□□□□ -1.31
SQLE-202ENST00000518604 LEMD3Q9Y2U8 911 aa6.85□□□□□ -1.31
SQLE-202ENST00000518604 FAM86C2PA6NEL3 165 aa6.84□□□□□ -1.31
SQLE-202ENST00000518604 NBPF9Q3BBW0 867 aa6.84□□□□□ -1.31
SQLE-202ENST00000518604 KIAA1211LQ6NV74 962 aa6.84□□□□□ -1.31
SQLE-202ENST00000518604 C6orf15Q6UXA7 325 aaPredicted RBP6.84□□□□□ -1.31
SQLE-202ENST00000518604 CCDC144CPQ8IYA2 1237 aa6.84□□□□□ -1.31
SQLE-202ENST00000518604 KLHL6Q8WZ60 621 aa6.84□□□□□ -1.31
SQLE-202ENST00000518604 ZNF669Q96BR6 464 aaPredicted RBP6.84□□□□□ -1.31
SQLE-202ENST00000518604 KRTAP9-2Q9BYQ4 174 aa6.84□□□□□ -1.31
SQLE-202ENST00000518604 MKRN2Q9H000 416 aaKnown RBP6.84□□□□□ -1.31
SQLE-202ENST00000518604 EPN3Q9H201 632 aa6.84□□□□□ -1.31
SQLE-202ENST00000518604 PIM2Q9P1W9 311 aa6.84□□□□□ -1.31
SQLE-202ENST00000518604 CNTNAP4Q9C0A0 1308 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 C9IYK1 514 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 K7ELQ4 463 aaPredicted RBP6.83□□□□□ -1.32
SQLE-202ENST00000518604 GJB6O95452 261 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 OXCT1P55809 520 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 AUHQ13825 339 aaKnown RBP6.83□□□□□ -1.32
SQLE-202ENST00000518604 TCEAL1Q15170 157 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 ARHGAP27Q6ZUM4 889 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 EEPD1Q7L9B9 569 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 NOP9Q86U38 636 aaKnown RBP6.83□□□□□ -1.32
SQLE-202ENST00000518604 PPFIBP1Q86W92 1011 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 C7orf61Q8IZ16 206 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 MFSD4AQ8N468 514 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 ST13P5Q8NFI4 369 aaPredicted RBP6.83□□□□□ -1.32
SQLE-202ENST00000518604 MICAL1Q8TDZ2 1067 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 ZSWIM4Q9H7M6 989 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 ST7Q9NRC1 585 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 PCDHB10Q9UN67 800 aa6.83□□□□□ -1.32
SQLE-202ENST00000518604 A0A087WZG4 1122 aa6.82□□□□□ -1.32
SQLE-202ENST00000518604 ANKRD34BA5PLL1 514 aa6.82□□□□□ -1.32
SQLE-202ENST00000518604 PDPK1O15530 556 aa6.82□□□□□ -1.32
SQLE-202ENST00000518604 CYP26A1O43174 497 aa6.82□□□□□ -1.32
SQLE-202ENST00000518604 CBX7O95931 251 aa6.82□□□□□ -1.32
SQLE-202ENST00000518604 FOSL1P15407 271 aa6.82□□□□□ -1.32
SQLE-202ENST00000518604 RASGRF1Q13972 1273 aa6.82□□□□□ -1.32
SQLE-202ENST00000518604 AXDND1Q5T1B0 1012 aaPredicted RBP6.82□□□□□ -1.32
SQLE-202ENST00000518604 HEATR6Q6AI08 1181 aaKnown RBP6.82□□□□□ -1.32
SQLE-202ENST00000518604 ENOX1Q8TC92 643 aaKnown RBP6.82□□□□□ -1.32
SQLE-202ENST00000518604 HAUS7Q99871 368 aa6.82□□□□□ -1.32
SQLE-202ENST00000518604 SEMA6BQ9H3T3 888 aa6.82□□□□□ -1.32
SQLE-202ENST00000518604 CDK11AQ9UQ88 783 aaPredicted RBP6.82□□□□□ -1.32
SQLE-202ENST00000518604 PCDHB12Q9Y5F1 795 aa6.82□□□□□ -1.32
SQLE-202ENST00000518604 SNX11Q9Y5W9 270 aa6.82□□□□□ -1.32
SQLE-202ENST00000518604 CAPN6Q9Y6Q1 641 aa6.82□□□□□ -1.32
SQLE-202ENST00000518604 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
SQLE-202ENST00000518604 PRR19A6NJB7 356 aa6.81□□□□□ -1.32
SQLE-202ENST00000518604 FAM155AB1AL88 458 aaPredicted RBP6.81□□□□□ -1.32
SQLE-202ENST00000518604 TP53P04637 393 aaPredicted RBP6.81□□□□□ -1.32
SQLE-202ENST00000518604 FURINP09958 794 aa6.81□□□□□ -1.32
SQLE-202ENST00000518604 PRSS36Q5K4E3 855 aa6.81□□□□□ -1.32
SQLE-202ENST00000518604 TDRD10Q5VZ19 366 aaKnown RBP6.81□□□□□ -1.32
SQLE-202ENST00000518604 DTWD2Q8NBA8 298 aa6.81□□□□□ -1.32
SQLE-202ENST00000518604 MRFAP1L1Q96HT8 127 aa6.81□□□□□ -1.32
SQLE-202ENST00000518604 ZNF512BQ96KM6 892 aaPredicted RBP6.81□□□□□ -1.32
SQLE-202ENST00000518604 Q96M66 194 aa6.81□□□□□ -1.32
SQLE-202ENST00000518604 DEPDC7Q96QD5 511 aa6.81□□□□□ -1.32
SQLE-202ENST00000518604 SRPK1Q96SB4 655 aaKnown RBP6.81□□□□□ -1.32
SQLE-202ENST00000518604 APBA2Q99767 749 aa6.81□□□□□ -1.32
SQLE-202ENST00000518604 GBP3Q9H0R5 595 aa6.81□□□□□ -1.32
SQLE-202ENST00000518604 ASCC2Q9H1I8 757 aaPredicted RBP6.81□□□□□ -1.32
SQLE-202ENST00000518604 CEACAM5P06731 702 aa6.8□□□□□ -1.32
SQLE-202ENST00000518604 CD247P20963 164 aa6.8□□□□□ -1.32
SQLE-202ENST00000518604 CLCN7P51798 805 aa6.8□□□□□ -1.32
SQLE-202ENST00000518604 TNK2Q07912 1038 aa6.8□□□□□ -1.32
SQLE-202ENST00000518604 RASA3Q14644 834 aa6.8□□□□□ -1.32
SQLE-202ENST00000518604 INTS5Q6P9B9 1019 aaKnown RBP6.8□□□□□ -1.32
SQLE-202ENST00000518604 NETO1Q8TDF5 533 aa6.8□□□□□ -1.32
SQLE-202ENST00000518604 GPR62Q9BZJ7 368 aa6.8□□□□□ -1.32
SQLE-202ENST00000518604 KLHL25Q9H0H3 589 aa6.8□□□□□ -1.32
SQLE-202ENST00000518604 TRIT1Q9H3H1 467 aaKnown RBP6.8□□□□□ -1.32
SQLE-202ENST00000518604 SNTG2Q9NY99 539 aa6.8□□□□□ -1.32
SQLE-202ENST00000518604 WHRNQ9P202 907 aa6.8□□□□□ -1.32
SQLE-202ENST00000518604 FBXL21Q9UKT6 434 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms