RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 NBPF6Q5VWK0 638 aa5.79□□□□□ -1.48
VPS13B-207ENST00000518569 TMEM192Q8IY95 271 aa5.79□□□□□ -1.48
VPS13B-207ENST00000518569 PIWIL2Q8TC59 973 aaKnown RBP5.79□□□□□ -1.48
VPS13B-207ENST00000518569 NBPF4Q96M43 638 aa5.79□□□□□ -1.48
VPS13B-207ENST00000518569 SLC6A18Q96N87 628 aa5.79□□□□□ -1.48
VPS13B-207ENST00000518569 ACTR10Q9NZ32 417 aa5.79□□□□□ -1.48
VPS13B-207ENST00000518569 SUCOQ9UBS9 1254 aaKnown RBP5.79□□□□□ -1.48
VPS13B-207ENST00000518569 KCNH3Q9ULD8 1083 aa5.79□□□□□ -1.48
VPS13B-207ENST00000518569 SNX11Q9Y5W9 270 aa5.79□□□□□ -1.48
VPS13B-207ENST00000518569 LTBP3Q9NS15 1303 aa5.78□□□□□ -1.48
VPS13B-207ENST00000518569 KLF4O43474 513 aa5.78□□□□□ -1.48
VPS13B-207ENST00000518569 COBLO75128 1261 aa5.78□□□□□ -1.48
VPS13B-207ENST00000518569 GTF2F1P35269 517 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS13B-207ENST00000518569 ZYXQ15942 572 aaKnown RBP5.78□□□□□ -1.48
VPS13B-207ENST00000518569 PPP2R5EQ16537 467 aa5.78□□□□□ -1.48
VPS13B-207ENST00000518569 ARHGAP27Q6ZUM4 889 aa5.78□□□□□ -1.48
VPS13B-207ENST00000518569 ANKS3Q6ZW76 656 aa5.78□□□□□ -1.48
VPS13B-207ENST00000518569 KRTAP1-3Q8IUG1 177 aa5.78□□□□□ -1.48
VPS13B-207ENST00000518569 CKAP2LQ8IYA6 745 aa5.78□□□□□ -1.48
VPS13B-207ENST00000518569 NETO1Q8TDF5 533 aa5.78□□□□□ -1.48
VPS13B-207ENST00000518569 UBXN4Q92575 508 aa5.78□□□□□ -1.48
VPS13B-207ENST00000518569 TNKS2Q9H2K2 1166 aa5.78□□□□□ -1.48
VPS13B-207ENST00000518569 ZNF214Q9UL59 606 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-207ENST00000518569 R3HCC1Q9Y3T6 440 aaKnown RBP5.78□□□□□ -1.48
VPS13B-207ENST00000518569 CAPN6Q9Y6Q1 641 aa5.78□□□□□ -1.48
VPS13B-207ENST00000518569 CEACAM5P06731 702 aa5.77□□□□□ -1.49
VPS13B-207ENST00000518569 CD97P48960 835 aa5.77□□□□□ -1.49
VPS13B-207ENST00000518569 IRAK1P51617 712 aa5.77□□□□□ -1.49
VPS13B-207ENST00000518569 IFI16Q16666 785 aaKnown RBP5.77□□□□□ -1.49
VPS13B-207ENST00000518569 ANKRD39Q53RE8 183 aa5.77□□□□□ -1.49
VPS13B-207ENST00000518569 MFSD4AQ8N468 514 aa5.77□□□□□ -1.49
VPS13B-207ENST00000518569 DHX38Q92620 1227 aaKnown RBP5.77□□□□□ -1.49
VPS13B-207ENST00000518569 Q96M66 194 aa5.77□□□□□ -1.49
VPS13B-207ENST00000518569 LRRC4CQ9HCJ2 640 aa5.77□□□□□ -1.49
VPS13B-207ENST00000518569 ZC3H7BQ9UGR2 993 aaKnown RBP5.77□□□□□ -1.49
VPS13B-207ENST00000518569 TMEM265A0A087WTH1 108 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 PAX4O43316 350 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 CLCN7P51798 805 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 TNK2Q07912 1038 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 RAB33AQ14088 237 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 FXNQ16595 210 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 NKPD1Q17RQ9 610 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 MSMPQ1L6U9 139 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 SPACA3Q8IXA5 215 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 DTWD2Q8NBA8 298 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 PRR13Q9NZ81 148 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 PLAGL2Q9UPG8 496 aa5.76□□□□□ -1.49
VPS13B-207ENST00000518569 PRR33A8MZF0 331 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 FAM155AB1AL88 458 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-207ENST00000518569 CBX7O95931 251 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 SRFP11831 508 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 HOXA10P31260 410 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-207ENST00000518569 SLC7A5Q01650 507 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 NCAPHQ15003 741 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 NBPF9Q3BBW0 867 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 VHLLQ6RSH7 139 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 THAP5Q7Z6K1 395 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 FAM181AQ8N9Y4 354 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 ENOX1Q8TC92 643 aaKnown RBP5.75□□□□□ -1.49
VPS13B-207ENST00000518569 HNRNPLLQ8WVV9 542 aaKnown RBP5.75□□□□□ -1.49
VPS13B-207ENST00000518569 MISP3Q96FF7 219 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 GPR62Q9BZJ7 368 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 PPP1R1BQ9UD71 204 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-207ENST00000518569 ST14Q9Y5Y6 855 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 U3KQE9 123 aa5.75□□□□□ -1.49
VPS13B-207ENST00000518569 FAM86C2PA6NEL3 165 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 KIAA1324LA8MWY0 1029 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-207ENST00000518569 C9IYK1 514 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 LRRN2O75325 713 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 PRNPP04156 253 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 ZNF143P52747 638 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-207ENST00000518569 GP2P55259 537 aaKnown RBP5.74□□□□□ -1.49
VPS13B-207ENST00000518569 AUHQ13825 339 aaKnown RBP5.74□□□□□ -1.49
VPS13B-207ENST00000518569 GNPTABQ3T906 1256 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 PPFIBP1Q86W92 1011 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 DTX1Q86Y01 620 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 CCDC144CPQ8IYA2 1237 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 C7orf61Q8IZ16 206 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 STK11IPQ8N1F8 1099 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 PLD6Q8N2A8 252 aaKnown RBP5.74□□□□□ -1.49
VPS13B-207ENST00000518569 KLHL6Q8WZ60 621 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 MKRN2Q9H000 416 aaKnown RBP5.74□□□□□ -1.49
VPS13B-207ENST00000518569 TRIT1Q9H3H1 467 aaKnown RBP5.74□□□□□ -1.49
VPS13B-207ENST00000518569 BSDC1Q9NW68 430 aaPredicted RBP5.74□□□□□ -1.49
VPS13B-207ENST00000518569 SIRPGQ9P1W8 387 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 VAV3Q9UKW4 847 aa5.74□□□□□ -1.49
VPS13B-207ENST00000518569 MED26O95402 600 aa5.73□□□□□ -1.49
VPS13B-207ENST00000518569 ITIH2P19823 946 aa5.73□□□□□ -1.49
VPS13B-207ENST00000518569 SPINK2P20155 84 aa5.73□□□□□ -1.49
VPS13B-207ENST00000518569 PRKCQQ04759 706 aa5.73□□□□□ -1.49
VPS13B-207ENST00000518569 LARP1BQ659C4 914 aaKnown RBP5.73□□□□□ -1.49
VPS13B-207ENST00000518569 FAM178BQ8IXR5 827 aa5.73□□□□□ -1.49
VPS13B-207ENST00000518569 ZNF512BQ96KM6 892 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-207ENST00000518569 HRASLS5Q96KN8 279 aa5.73□□□□□ -1.49
VPS13B-207ENST00000518569 TRIM55Q9BYV6 548 aa5.73□□□□□ -1.49
VPS13B-207ENST00000518569 ASCC2Q9H1I8 757 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-207ENST00000518569 GPATCH2Q9NW75 528 aa5.73□□□□□ -1.49
VPS13B-207ENST00000518569 PCDHB12Q9Y5F1 795 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms