RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ACER1Q8TDN7 264 aa13.97□□□□□ -0.17
TRAPPC9-203ENST00000517667 RNPC3Q96LT9 517 aaKnown RBP13.97□□□□□ -0.17
TRAPPC9-203ENST00000517667 DBNDD2Q9BQY9 259 aa13.97□□□□□ -0.17
TRAPPC9-203ENST00000517667 MOV10L1Q9BXT6 1211 aaKnown RBP13.97□□□□□ -0.17
TRAPPC9-203ENST00000517667 SPATC1LQ9H0A9 340 aa13.97□□□□□ -0.17
TRAPPC9-203ENST00000517667 MROH8Q9H579 483 aa13.97□□□□□ -0.17
TRAPPC9-203ENST00000517667 MYH8P13535 1937 aa13.97□□□□□ -0.17
TRAPPC9-203ENST00000517667 TRIM43BA6NCK2 446 aa13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 IPO8O15397 1037 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 IDH1O75874 414 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 ERCC3P19447 782 aa13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 ZAP70P43403 619 aa13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 RARSP54136 660 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 OS9Q13438 667 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 LRRC41Q15345 812 aa13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 TJAP1Q5JTD0 557 aa13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 ANO1Q5XXA6 986 aa13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 TRIM43Q96BQ3 446 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 TANGO6Q9C0B7 1094 aa13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 PIH1D3Q9NQM4 214 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 NRBP1Q9UHY1 535 aa13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 PHF24Q9UPV7 400 aa13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 PARP14Q460N5 1801 aa13.96□□□□□ -0.17
TRAPPC9-203ENST00000517667 CLTBP09497 229 aa13.95□□□□□ -0.18
TRAPPC9-203ENST00000517667 SHMT1P34896 483 aa13.95□□□□□ -0.18
TRAPPC9-203ENST00000517667 TLE2Q04725 743 aa13.95□□□□□ -0.18
TRAPPC9-203ENST00000517667 SH3RF1Q7Z6J0 888 aa13.95□□□□□ -0.18
TRAPPC9-203ENST00000517667 MIGA1Q8NAN2 632 aa13.95□□□□□ -0.18
TRAPPC9-203ENST00000517667 FERMT2Q96AC1 680 aa13.95□□□□□ -0.18
TRAPPC9-203ENST00000517667 ZNFX1Q9P2E3 1918 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-203ENST00000517667 PLXNA1Q9UIW2 1896 aa13.95□□□□□ -0.18
TRAPPC9-203ENST00000517667 ROBO3Q96MS0 1386 aa13.95□□□□□ -0.18
TRAPPC9-203ENST00000517667 TNFRSF10AO00220 468 aa13.94□□□□□ -0.18
TRAPPC9-203ENST00000517667 COBLO75128 1261 aa13.94□□□□□ -0.18
TRAPPC9-203ENST00000517667 RARBP10826 455 aa13.94□□□□□ -0.18
TRAPPC9-203ENST00000517667 RAG1P15918 1043 aa13.94□□□□□ -0.18
TRAPPC9-203ENST00000517667 FPGSQ05932 587 aa13.94□□□□□ -0.18
TRAPPC9-203ENST00000517667 MAP3K12Q12852 859 aa13.94□□□□□ -0.18
TRAPPC9-203ENST00000517667 FAM47AQ5JRC9 791 aa13.94□□□□□ -0.18
TRAPPC9-203ENST00000517667 RNF180Q86T96 592 aa13.94□□□□□ -0.18
TRAPPC9-203ENST00000517667 MAGEB6Q8N7X4 407 aa13.94□□□□□ -0.18
TRAPPC9-203ENST00000517667 MAML3Q96JK9 1138 aa13.94□□□□□ -0.18
TRAPPC9-203ENST00000517667 XPNPEP3Q9NQH7 507 aa13.94□□□□□ -0.18
TRAPPC9-203ENST00000517667 KIAA0355O15063 1070 aa13.93□□□□□ -0.18
TRAPPC9-203ENST00000517667 POLR3DP05423 398 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC9-203ENST00000517667 FCER1AP12319 257 aa13.93□□□□□ -0.18
TRAPPC9-203ENST00000517667 TRIM27P14373 513 aa13.93□□□□□ -0.18
TRAPPC9-203ENST00000517667 POLA2Q14181 598 aa13.93□□□□□ -0.18
TRAPPC9-203ENST00000517667 PLS1Q14651 629 aa13.93□□□□□ -0.18
TRAPPC9-203ENST00000517667 SEPT2Q15019 361 aa13.93□□□□□ -0.18
TRAPPC9-203ENST00000517667 NCAPG2Q86XI2 1143 aa13.93□□□□□ -0.18
TRAPPC9-203ENST00000517667 COL11A1P12107 1806 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 MPHOSPH10O00566 681 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 SLC25A27O95847 323 aa13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 DNAJB2P25686 324 aa13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 ITGB8P26012 769 aa13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 GUCY1A2P33402 732 aa13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 PLCD1P51178 756 aa13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 PRAMEF19Q5SWL8 479 aa13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 SSH3Q8TE77 659 aa13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 SH2D4AQ9H788 454 aa13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 DBNLQ9UJU6 430 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-203ENST00000517667 SMCHD1A6NHR9 2005 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 A0A1W2PQ45 241 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 A0A1W2PQY0 241 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 A0A1W2PRG0 241 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 PQBP1O60828 265 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 SURF6O75683 361 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 FLOT1O75955 427 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 COL9A1P20849 921 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 DSG3P32926 999 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 GABPAQ06546 454 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 GRIN2CQ14957 1233 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 TMEM179Q6ZVK1 233 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 TOX2Q96NM4 488 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 ZNF576Q9H609 170 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 ARHGEF10LQ9HCE6 1279 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 TMEM39AQ9NV64 488 aa13.91□□□□□ -0.18
TRAPPC9-203ENST00000517667 BDP1A6H8Y1 2624 aa13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 DCDC2CA8MYV0 355 aa13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 AKR1A1P14550 325 aa13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 EPHB4P54760 987 aa13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 CCDC174Q6PII3 467 aa13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 ANKRD33Q7Z3H0 272 aa13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 NUP133Q8WUM0 1156 aa13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 RIOK1Q9BRS2 568 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 TINF2Q9BSI4 451 aa13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 TSEN34Q9BSV6 310 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 CRNKL1Q9BZJ0 848 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 SWAP70Q9UH65 585 aa13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 DIS3Q9Y2L1 958 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-203ENST00000517667 MAGEB6P1A0A0J9YX57 407 aa13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 WDR46O15213 610 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 PGK1P00558 417 aa13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 ATP8B2P98198 1209 aa13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 KCTD2Q14681 263 aa13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 USP38Q8NB14 1042 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms