RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 PNMA3Q9UL41 463 aa10.49□□□□□ -0.73
PABPC1-202ENST00000517403 TACC3Q9Y6A5 838 aa10.49□□□□□ -0.73
PABPC1-202ENST00000517403 CEP290O15078 2479 aa10.49□□□□□ -0.73
PABPC1-202ENST00000517403 LAMA3Q16787 3333 aa10.49□□□□□ -0.73
PABPC1-202ENST00000517403 LRRC37A2A6NM11 1700 aa10.48□□□□□ -0.73
PABPC1-202ENST00000517403 M0R2C6 588 aa10.48□□□□□ -0.73
PABPC1-202ENST00000517403 HMGCRP04035 888 aa10.48□□□□□ -0.73
PABPC1-202ENST00000517403 HOXD10P28358 340 aa10.48□□□□□ -0.73
PABPC1-202ENST00000517403 CACNB2Q08289 660 aaPredicted RBP10.48□□□□□ -0.73
PABPC1-202ENST00000517403 CERKLQ49MI3 558 aaPredicted RBP10.48□□□□□ -0.73
PABPC1-202ENST00000517403 LHX8Q68G74 356 aa10.48□□□□□ -0.73
PABPC1-202ENST00000517403 USP17L2Q6R6M4 530 aa10.48□□□□□ -0.73
PABPC1-202ENST00000517403 CATSPERGQ6ZRH7 1159 aa10.48□□□□□ -0.73
PABPC1-202ENST00000517403 CLASRPQ8N2M8 674 aaKnown RBP10.48□□□□□ -0.73
PABPC1-202ENST00000517403 TBC1D2Q9BYX2 928 aa10.48□□□□□ -0.73
PABPC1-202ENST00000517403 TSPYL2Q9H2G4 693 aaPredicted RBP10.48□□□□□ -0.73
PABPC1-202ENST00000517403 RPAP3Q9H6T3 665 aaPredicted RBP10.48□□□□□ -0.73
PABPC1-202ENST00000517403 SALL3Q9BXA9 1300 aa10.48□□□□□ -0.73
PABPC1-202ENST00000517403 LCTP09848 1927 aa10.48□□□□□ -0.73
PABPC1-202ENST00000517403 PLXNA1Q9UIW2 1896 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 MYH4Q9Y623 1939 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 C19orf81C9J6K1 198 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 IFIT2P09913 472 aaKnown RBP10.47□□□□□ -0.73
PABPC1-202ENST00000517403 PRKAR2AP13861 404 aaKnown RBP10.47□□□□□ -0.73
PABPC1-202ENST00000517403 UBXN2AP68543 259 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 RASGRP2Q7LDG7 609 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 SPICE1Q8N0Z3 855 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 NKX2-3Q8TAU0 364 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 OSBP2Q969R2 916 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 COA7Q96BR5 231 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 ATG4CQ96DT6 458 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 FEZ1Q99689 392 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 FBXO28Q9NVF7 368 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 TMOD4Q9NZQ9 345 aa10.47□□□□□ -0.73
PABPC1-202ENST00000517403 USP17L12C9JPN9 530 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 USP17L21D6R901 530 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 RBAK-RBAKDNI3L0D1 243 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 RAB11FIP3O75154 756 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 C12orf60Q5U649 245 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 CTR9Q6PD62 1173 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 LBX2Q6XYB7 198 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 STK11IPQ8N1F8 1099 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 GPRC5AQ8NFJ5 357 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 PI4K2BQ8TCG2 481 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 LRCH3Q96II8 777 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 SEC62Q99442 399 aaKnown RBP10.46□□□□□ -0.73
PABPC1-202ENST00000517403 MOV10L1Q9BXT6 1211 aaKnown RBP10.46□□□□□ -0.73
PABPC1-202ENST00000517403 CRNKL1Q9BZJ0 848 aaKnown RBP10.46□□□□□ -0.73
PABPC1-202ENST00000517403 OGDHLQ9ULD0 1010 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 ZMYND8Q9ULU4 1186 aaPredicted RBP10.46□□□□□ -0.73
PABPC1-202ENST00000517403 PCDHB8Q9UN66 801 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 PCDHB13Q9Y5F0 798 aa10.46□□□□□ -0.73
PABPC1-202ENST00000517403 ROBO3Q96MS0 1386 aa10.46□□□□□ -0.74
PABPC1-202ENST00000517403 DNAH12Q6ZR08 3092 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 ZNFX1Q9P2E3 1918 aaKnown RBP10.45□□□□□ -0.74
PABPC1-202ENST00000517403 GSG1L2A8MUP6 293 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 COBLO75128 1261 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 POLR3DP05423 398 aaPredicted RBP10.45□□□□□ -0.74
PABPC1-202ENST00000517403 COL6A1P12109 1028 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 SYN1P17600 705 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 CDK8P49336 464 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 PDE3AQ14432 1141 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 GRB14Q14449 540 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 HSP90AB4PQ58FF6 505 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 C16orf86Q6ZW13 317 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 TTC6Q86TZ1 520 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 REPS2Q8NFH8 660 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 DPF3Q92784 378 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 NUP88Q99567 741 aaPredicted RBP10.45□□□□□ -0.74
PABPC1-202ENST00000517403 APBA2Q99767 749 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 TRIM34Q9BYJ4 488 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 DCTPP1Q9H773 170 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 GINM1Q9NU53 330 aa10.45□□□□□ -0.74
PABPC1-202ENST00000517403 RPTORQ8N122 1335 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 USP17L15C9J2P7 530 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 USP17L13C9JLJ4 530 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 USP17L11C9JVI0 530 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 USP17L18D6R9N7 530 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 USP17L22D6RA61 530 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 USP17L17D6RBQ6 530 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 USP17L19D6RCP7 530 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 USP17L20D6RJB6 530 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 MPHOSPH10O00566 681 aaKnown RBP10.44□□□□□ -0.74
PABPC1-202ENST00000517403 IGSF3O75054 1194 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 TFRCP02786 760 aaKnown RBP10.44□□□□□ -0.74
PABPC1-202ENST00000517403 RASA1P20936 1047 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 PTPREP23469 700 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 CYP2C19P33261 490 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 USP17L24Q0WX57 530 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 MAP2K5Q13163 448 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 PABPC4Q13310 644 aaKnown RBP eCLIP10.44□□□□□ -0.74
PABPC1-202ENST00000517403 TTF1Q15361 905 aaPredicted RBP10.44□□□□□ -0.74
PABPC1-202ENST00000517403 UBE3CQ15386 1083 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 LRRC26Q2I0M4 334 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 ANO1Q5XXA6 986 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 PLEKHH3Q7Z736 793 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 C7orf61Q8IZ16 206 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 LENG1Q96BZ8 264 aaPredicted RBP10.44□□□□□ -0.74
PABPC1-202ENST00000517403 STRBPQ96SI9 672 aaKnown RBP10.44□□□□□ -0.74
PABPC1-202ENST00000517403 NUDT12Q9BQG2 462 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms