RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 GREM1O60565 184 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 DNAJA2O60884 412 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 KRT1P04264 644 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 CFPP27918 469 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 TPP2P29144 1249 aaPredicted RBP3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 RAP1GAPP47736 663 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 GAB4Q2WGN9 574 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 FBLN7Q53RD9 439 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 C1QL4Q86Z23 238 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 CREG2Q8IUH2 290 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 PHACTR4Q8IZ21 702 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 ZNF296Q8WUU4 475 aaPredicted RBP3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 KREMEN1Q96MU8 473 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 DUSP15Q9H1R2 295 aaPredicted RBP3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 NSUN3Q9H649 340 aaKnown RBP3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 GMIPQ9P107 970 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 PCDHB14Q9Y5E9 798 aa3.82□□□□□ -1.8
SNORA40.9-201ENST00000515895 LRRN2O75325 713 aa3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 TSPAN15O95858 294 aa3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 C1QTNF9P0C862 333 aa3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 SRFP11831 508 aa3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 ZNF16P17020 682 aaPredicted RBP3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 TRHRP34981 398 aaPredicted RBP3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 CRKP46108 304 aa3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 TSPYL5Q86VY4 417 aaPredicted RBP3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 ABHD4Q8TB40 342 aa3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 BAHD1Q8TBE0 780 aaPredicted RBP3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 KIF2CQ99661 725 aa3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 ADAMTS10Q9H324 1103 aa3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 BRMS1Q9HCU9 246 aa3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 ADAMTS1Q9UHI8 967 aa3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 DUSP13Q9UII6 198 aa3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 TMEM59LQ9UK28 342 aa3.81□□□□□ -1.8
SNORA40.9-201ENST00000515895 SLC22A31A6NKX4 558 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 RGS13O14921 159 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 ATE1O95260 518 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 RAC2P15153 192 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 RAG1P15918 1043 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 LTKP29376 864 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 GBP1P32455 592 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 CHMP4BP1P59074 171 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 RNF4P78317 190 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 EGR3Q06889 387 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 APOBRQ0VD83 1088 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 ARSHQ5FYA8 562 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 OVOS1Q6IE37 1185 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 LCNL1Q6ZST4 164 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 LRRC56Q8IYG6 542 aaPredicted RBP3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 FBXO15Q8NCQ5 510 aaPredicted RBP3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 BHLHE22Q8NFJ8 381 aaPredicted RBP3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 TOX2Q96NM4 488 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 PPP1R16BQ96T49 567 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 C19orf44Q9H6X5 657 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 EHMT1Q9H9B1 1298 aa3.8□□□□□ -1.8
SNORA40.9-201ENST00000515895 RBM47A0AV96 593 aaKnown RBP3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 UBOX5O94941 541 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 HPXP02790 462 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 ZNF76P36508 570 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 MFAP1P55081 439 aaKnown RBP3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 SEZ6Q53EL9 994 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 LDLRAD1Q5T700 205 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 ANKLE2Q86XL3 938 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 KIAA0825Q8IV33 1275 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 REXO1Q8N1G1 1221 aaKnown RBP3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 TMEM87AQ8NBN3 555 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 MYLIPQ8WY64 445 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 RNF32Q9H0A6 362 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 EPB41L4BQ9H329 900 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 DCP1AQ9NPI6 582 aaPredicted RBP3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 UBP1Q9NZI7 540 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 PCDHA11Q9Y5I1 949 aa3.79□□□□□ -1.8
SNORA40.9-201ENST00000515895 SHISA3A0PJX4 238 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 KRTAP9-7A8MTY7 169 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 NPIPB6E9PJ23 425 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 NFIBO00712 420 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 ZGLP1P0C6A0 271 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 MCM4P33991 863 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 ZNF165P49910 485 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 CLCQ05315 142 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 RAD51AP2Q09MP3 1159 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 NMIQ13287 307 aaPredicted RBP3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 CLEC16AQ2KHT3 1053 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 TIGD5Q53EQ6 642 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 CDCP2Q5VXM1 449 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 GK5Q6ZS86 529 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 NLRC3Q7RTR2 1065 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 ENOX1Q8TC92 643 aaKnown RBP3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 NKD1Q969G9 470 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 SYTL4Q96C24 671 aaPredicted RBP3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 VWCEQ96DN2 955 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 NT5C1AQ9BXI3 368 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 ASCC2Q9H1I8 757 aaPredicted RBP3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 SP110Q9HB58 689 aa3.78□□□□□ -1.8
SNORA40.9-201ENST00000515895 ETV2O00321 342 aaPredicted RBP3.77□□□□□ -1.81
SNORA40.9-201ENST00000515895 CLEC3AO75596 197 aa3.77□□□□□ -1.81
SNORA40.9-201ENST00000515895 ZSCAN22P10073 491 aaPredicted RBP3.77□□□□□ -1.81
SNORA40.9-201ENST00000515895 POLR2BP30876 1174 aaKnown RBP3.77□□□□□ -1.81
SNORA40.9-201ENST00000515895 CCNFP41002 786 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms