RNA–Protein interactions for RNA: ENST00000514898.1

RUFY3-213, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 4

Gene RUFY3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-213ENST00000514898 COL25A1Q9BXS0 654 aaPredicted RBP28.17■■■□□ 2.1
RUFY3-213ENST00000514898 PRUNE2Q8WUY3 3088 aa28.17■■■□□ 2.1
RUFY3-213ENST00000514898 COBLO75128 1261 aa28.16■■■□□ 2.1
RUFY3-213ENST00000514898 SPATC1LQ9H0A9 340 aa28.16■■■□□ 2.1
RUFY3-213ENST00000514898 CDH23Q9H251 3354 aa28.16■■■□□ 2.1
RUFY3-213ENST00000514898 STRNO43815 780 aa28.15■■■□□ 2.1
RUFY3-213ENST00000514898 SNX17Q15036 470 aa28.15■■■□□ 2.1
RUFY3-213ENST00000514898 AACSQ86V21 672 aa28.15■■■□□ 2.1
RUFY3-213ENST00000514898 SHCBP1Q8NEM2 672 aa28.15■■■□□ 2.1
RUFY3-213ENST00000514898 HOXC10Q9NYD6 342 aa28.15■■■□□ 2.1
RUFY3-213ENST00000514898 EXOC6BQ9Y2D4 811 aa28.15■■■□□ 2.1
RUFY3-213ENST00000514898 MAGEB6P1A0A0J9YX57 407 aa28.14■■■□□ 2.1
RUFY3-213ENST00000514898 POLR3DP05423 398 aaPredicted RBP28.14■■■□□ 2.1
RUFY3-213ENST00000514898 ERCC3P19447 782 aa28.14■■■□□ 2.1
RUFY3-213ENST00000514898 SLC39A5Q6ZMH5 540 aa28.14■■■□□ 2.1
RUFY3-213ENST00000514898 DPP9Q86TI2 863 aa28.14■■■□□ 2.1
RUFY3-213ENST00000514898 SIAH1Q8IUQ4 282 aa28.14■■■□□ 2.1
RUFY3-213ENST00000514898 ITPRIPQ8IWB1 547 aa28.14■■■□□ 2.1
RUFY3-213ENST00000514898 SPTBN5Q9NRC6 3674 aaKnown RBP28.14■■■□□ 2.09
RUFY3-213ENST00000514898 PARP14Q460N5 1801 aa28.13■■■□□ 2.09
RUFY3-213ENST00000514898 PDE6AP16499 860 aa28.13■■■□□ 2.09
RUFY3-213ENST00000514898 ANO1Q5XXA6 986 aa28.13■■■□□ 2.09
RUFY3-213ENST00000514898 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.13■■■□□ 2.09
RUFY3-213ENST00000514898 ARRDC4Q8NCT1 418 aa28.13■■■□□ 2.09
RUFY3-213ENST00000514898 FAM161BQ96MY7 647 aa28.13■■■□□ 2.09
RUFY3-213ENST00000514898 TCRBV5S4A2TA0A5A2 114 aa28.12■■■□□ 2.09
RUFY3-213ENST00000514898 SEPT4O43236 478 aa28.12■■■□□ 2.09
RUFY3-213ENST00000514898 SLC44A5Q8NCS7 719 aa28.12■■■□□ 2.09
RUFY3-213ENST00000514898 DCP1AQ9NPI6 582 aaPredicted RBP28.12■■■□□ 2.09
RUFY3-213ENST00000514898 MCM9Q9NXL9 1143 aa28.12■■■□□ 2.09
RUFY3-213ENST00000514898 ATP11BQ9Y2G3 1177 aa28.12■■■□□ 2.09
RUFY3-213ENST00000514898 CYP2D6P10635 497 aa28.11■■■□□ 2.09
RUFY3-213ENST00000514898 DSG3P32926 999 aa28.11■■■□□ 2.09
RUFY3-213ENST00000514898 SHHQ15465 462 aa28.11■■■□□ 2.09
RUFY3-213ENST00000514898 C9orf50Q5SZB4 431 aa28.11■■■□□ 2.09
RUFY3-213ENST00000514898 SLC9C2Q5TAH2 1124 aa28.11■■■□□ 2.09
RUFY3-213ENST00000514898 FTSJ3Q8IY81 847 aaKnown RBP28.11■■■□□ 2.09
RUFY3-213ENST00000514898 SDR42E1Q8WUS8 393 aa28.11■■■□□ 2.09
RUFY3-213ENST00000514898 TANGO6Q9C0B7 1094 aa28.11■■■□□ 2.09
RUFY3-213ENST00000514898 SMCHD1A6NHR9 2005 aa28.11■■■□□ 2.09
RUFY3-213ENST00000514898 ZNFX1Q9P2E3 1918 aaKnown RBP28.1■■■□□ 2.09
RUFY3-213ENST00000514898 MPHOSPH10O00566 681 aaKnown RBP28.1■■■□□ 2.09
RUFY3-213ENST00000514898 PRAMEF19Q5SWL8 479 aa28.1■■■□□ 2.09
RUFY3-213ENST00000514898 ERC1Q8IUD2 1116 aa28.1■■■□□ 2.09
RUFY3-213ENST00000514898 ABRAQ8N0Z2 381 aa28.1■■■□□ 2.09
RUFY3-213ENST00000514898 CRNKL1Q9BZJ0 848 aaKnown RBP28.1■■■□□ 2.09
RUFY3-213ENST00000514898 PRKAG2Q9UGJ0 569 aa28.1■■■□□ 2.09
RUFY3-213ENST00000514898 TMEM179Q6ZVK1 233 aa28.09■■■□□ 2.09
RUFY3-213ENST00000514898 CLEC10AQ8IUN9 316 aa28.09■■■□□ 2.09
RUFY3-213ENST00000514898 LCORLQ8N3X6 602 aa28.09■■■□□ 2.09
RUFY3-213ENST00000514898 MB21D1Q8N884 522 aa28.09■■■□□ 2.09
RUFY3-213ENST00000514898 PDLIM7Q9NR12 457 aa28.09■■■□□ 2.09
RUFY3-213ENST00000514898 ZNF532Q9HCE3 1301 aa28.09■■■□□ 2.09
RUFY3-213ENST00000514898 TTF1Q15361 905 aaPredicted RBP28.08■■■□□ 2.09
RUFY3-213ENST00000514898 TRIM60Q495X7 471 aa28.08■■■□□ 2.09
RUFY3-213ENST00000514898 C1orf53Q5VUE5 145 aa28.08■■■□□ 2.09
RUFY3-213ENST00000514898 SH3RF1Q7Z6J0 888 aa28.08■■■□□ 2.09
RUFY3-213ENST00000514898 ATG4CQ96DT6 458 aa28.08■■■□□ 2.09
RUFY3-213ENST00000514898 MAML3Q96JK9 1138 aa28.08■■■□□ 2.09
RUFY3-213ENST00000514898 MROH8Q9H579 483 aa28.08■■■□□ 2.09
RUFY3-213ENST00000514898 IL1RAPL2Q9NP60 686 aa28.08■■■□□ 2.09
RUFY3-213ENST00000514898 TRIM43BA6NCK2 446 aa28.07■■■□□ 2.08
RUFY3-213ENST00000514898 KBTBD13C9JR72 458 aa28.07■■■□□ 2.08
RUFY3-213ENST00000514898 SMIM22K7EJ46 135 aa28.07■■■□□ 2.08
RUFY3-213ENST00000514898 LRRC41Q15345 812 aa28.07■■■□□ 2.08
RUFY3-213ENST00000514898 FAM47AQ5JRC9 791 aa28.07■■■□□ 2.08
RUFY3-213ENST00000514898 ZNF697Q5TEC3 545 aa28.07■■■□□ 2.08
RUFY3-213ENST00000514898 RHPN1Q8TCX5 695 aa28.07■■■□□ 2.08
RUFY3-213ENST00000514898 BADQ92934 168 aa28.07■■■□□ 2.08
RUFY3-213ENST00000514898 TRIM43Q96BQ3 446 aaPredicted RBP28.07■■■□□ 2.08
RUFY3-213ENST00000514898 DYNLL2Q96FJ2 89 aa28.07■■■□□ 2.08
RUFY3-213ENST00000514898 CDX2Q99626 313 aaPredicted RBP28.07■■■□□ 2.08
RUFY3-213ENST00000514898 TMX2Q9Y320 296 aa28.07■■■□□ 2.08
RUFY3-213ENST00000514898 MYH8P13535 1937 aa28.06■■■□□ 2.08
RUFY3-213ENST00000514898 AKR1B1P15121 316 aa28.06■■■□□ 2.08
RUFY3-213ENST00000514898 ADCYAP1R1P41586 468 aa28.06■■■□□ 2.08
RUFY3-213ENST00000514898 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.06■■■□□ 2.08
RUFY3-213ENST00000514898 SWAP70Q9UH65 585 aa28.06■■■□□ 2.08
RUFY3-213ENST00000514898 COL11A1P12107 1806 aaPredicted RBP28.05■■■□□ 2.08
RUFY3-213ENST00000514898 NCAPG2Q86XI2 1143 aa28.05■■■□□ 2.08
RUFY3-213ENST00000514898 SPICE1Q8N0Z3 855 aa28.05■■■□□ 2.08
RUFY3-213ENST00000514898 SEMA6BQ9H3T3 888 aa28.05■■■□□ 2.08
RUFY3-213ENST00000514898 VCPKMTQ9H867 229 aa28.05■■■□□ 2.08
RUFY3-213ENST00000514898 BAZ2AQ9UIF9 1905 aaKnown RBP28.05■■■□□ 2.08
RUFY3-213ENST00000514898 ADAMTS5Q9UNA0 930 aa28.05■■■□□ 2.08
RUFY3-213ENST00000514898 FLOT1O75955 427 aa28.04■■■□□ 2.08
RUFY3-213ENST00000514898 PLS1Q14651 629 aa28.04■■■□□ 2.08
RUFY3-213ENST00000514898 TMEM132BQ14DG7 1078 aa28.04■■■□□ 2.08
RUFY3-213ENST00000514898 SLFNL1Q499Z3 407 aa28.04■■■□□ 2.08
RUFY3-213ENST00000514898 FERMT2Q96AC1 680 aa28.04■■■□□ 2.08
RUFY3-213ENST00000514898 TTYH1Q9H313 450 aaPredicted RBP28.04■■■□□ 2.08
RUFY3-213ENST00000514898 PRDM5Q9NQX1 630 aaPredicted RBP28.04■■■□□ 2.08
RUFY3-213ENST00000514898 SLC5A4Q9NY91 659 aa28.04■■■□□ 2.08
RUFY3-213ENST00000514898 GOLIM4O00461 696 aa28.03■■■□□ 2.08
RUFY3-213ENST00000514898 PRKAB2O43741 272 aa28.03■■■□□ 2.08
RUFY3-213ENST00000514898 ITGB8P26012 769 aa28.03■■■□□ 2.08
RUFY3-213ENST00000514898 ARMT1Q9H993 441 aa28.03■■■□□ 2.08
RUFY3-213ENST00000514898 PHF24Q9UPV7 400 aa28.03■■■□□ 2.08
RUFY3-213ENST00000514898 TTC28Q96AY4 2481 aa28.03■■■□□ 2.08
RUFY3-213ENST00000514898 SMAD3P84022 425 aaKnown RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms