RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 AXDND1Q5T1B0 1012 aaPredicted RBP7.91□□□□□ -1.14
HMGCS1-207ENST00000514610 RNF141Q8WVD5 230 aa7.91□□□□□ -1.14
HMGCS1-207ENST00000514610 PRDM5Q9NQX1 630 aaPredicted RBP7.91□□□□□ -1.14
HMGCS1-207ENST00000514610 SIRPGQ9P1W8 387 aa7.91□□□□□ -1.14
HMGCS1-207ENST00000514610 DDAH1O94760 285 aa7.9□□□□□ -1.14
HMGCS1-207ENST00000514610 TP53P04637 393 aaPredicted RBP7.9□□□□□ -1.14
HMGCS1-207ENST00000514610 FURINP09958 794 aa7.9□□□□□ -1.14
HMGCS1-207ENST00000514610 SLC7A5Q01650 507 aa7.9□□□□□ -1.14
HMGCS1-207ENST00000514610 CYP27C1Q4G0S4 372 aa7.9□□□□□ -1.14
HMGCS1-207ENST00000514610 KIAA1211LQ6NV74 962 aa7.9□□□□□ -1.14
HMGCS1-207ENST00000514610 ZDHHC13Q8IUH4 622 aa7.9□□□□□ -1.14
HMGCS1-207ENST00000514610 Q96M66 194 aa7.9□□□□□ -1.14
HMGCS1-207ENST00000514610 ASPNQ9BXN1 380 aa7.9□□□□□ -1.14
HMGCS1-207ENST00000514610 FAM221BA6H8Z2 402 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 U2SURPO15042 1029 aaKnown RBP7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 SHOXO15266 292 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 GSC2O15499 205 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 CYP27A1Q02318 531 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 RASA3Q14644 834 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 BMS1Q14692 1282 aaKnown RBP7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 SFRP5Q5T4F7 317 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 DCAF15Q66K64 600 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 ZNF746Q6NUN9 644 aaPredicted RBP7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 FAM181AQ8N9Y4 354 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 FBXL18Q96ME1 805 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 OSBPL1AQ9BXW6 950 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 ZSWIM4Q9H7M6 989 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 SNTG2Q9NY99 539 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 SUSD2Q9UGT4 822 aa7.89□□□□□ -1.15
HMGCS1-207ENST00000514610 PRR19A6NJB7 356 aa7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 CCDC85CA6NKD9 419 aa7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 IGF2BP3O00425 579 aaKnown RBP eCLIP7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 CBFA2T2O43439 604 aa7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 CBX7O95931 251 aa7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 OXCT1P55809 520 aa7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 RNF4P78317 190 aa7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 DUSP27Q5VZP5 1158 aa7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 C22orf34Q6ZV56 151 aa7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 MKRN2Q9H000 416 aaKnown RBP7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 ATG3Q9NT62 314 aa7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 GTF2IRD1Q9UHL9 959 aa7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 CAPN6Q9Y6Q1 641 aa7.88□□□□□ -1.15
HMGCS1-207ENST00000514610 ZNF865P0CJ78 1059 aaPredicted RBP7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 CYP7A1P22680 504 aa7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 CHMP4BP1P59074 171 aa7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 SNW1Q13573 536 aaKnown RBP7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 NCAPHQ15003 741 aa7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 NBPF9Q3BBW0 867 aa7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 BBS9Q3SYG4 887 aa7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 CCDC144CPQ8IYA2 1237 aa7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 DTWD2Q8NBA8 298 aa7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 MKL1Q969V6 931 aa7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 DEPDC7Q96QD5 511 aa7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 HAUS7Q99871 368 aa7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 CDK11AQ9UQ88 783 aaPredicted RBP7.87□□□□□ -1.15
HMGCS1-207ENST00000514610 EPHX1P07099 455 aa7.86□□□□□ -1.15
HMGCS1-207ENST00000514610 ITGB7P26010 798 aa7.86□□□□□ -1.15
HMGCS1-207ENST00000514610 AUHQ13825 339 aaKnown RBP7.86□□□□□ -1.15
HMGCS1-207ENST00000514610 PRSS36Q5K4E3 855 aa7.86□□□□□ -1.15
HMGCS1-207ENST00000514610 SMARCC1Q92922 1105 aaPredicted RBP7.86□□□□□ -1.15
HMGCS1-207ENST00000514610 COX4I2Q96KJ9 171 aa7.86□□□□□ -1.15
HMGCS1-207ENST00000514610 SRPK1Q96SB4 655 aaKnown RBP7.86□□□□□ -1.15
HMGCS1-207ENST00000514610 METTL22Q9BUU2 404 aaPredicted RBP7.86□□□□□ -1.15
HMGCS1-207ENST00000514610 KLHL25Q9H0H3 589 aa7.86□□□□□ -1.15
HMGCS1-207ENST00000514610 CCDC113Q9H0I3 377 aa7.86□□□□□ -1.15
HMGCS1-207ENST00000514610 LRRC4CQ9HCJ2 640 aa7.86□□□□□ -1.15
HMGCS1-207ENST00000514610 ZNF451Q9Y4E5 1061 aa7.86□□□□□ -1.15
HMGCS1-207ENST00000514610 KIR3DL1P43629 444 aa7.85□□□□□ -1.15
HMGCS1-207ENST00000514610 TNK2Q07912 1038 aa7.85□□□□□ -1.15
HMGCS1-207ENST00000514610 NKPD1Q17RQ9 610 aa7.85□□□□□ -1.15
HMGCS1-207ENST00000514610 C7orf61Q8IZ16 206 aa7.85□□□□□ -1.15
HMGCS1-207ENST00000514610 MFSD4AQ8N468 514 aa7.85□□□□□ -1.15
HMGCS1-207ENST00000514610 PRDM14Q9GZV8 571 aa7.85□□□□□ -1.15
HMGCS1-207ENST00000514610 SEMA6BQ9H3T3 888 aa7.85□□□□□ -1.15
HMGCS1-207ENST00000514610 PLAGL2Q9UPG8 496 aa7.85□□□□□ -1.15
HMGCS1-207ENST00000514610 PDPK1O15530 556 aa7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 SUSD5O60279 629 aa7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 ITIH2P19823 946 aa7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 HOXA10P31260 410 aaPredicted RBP7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 RASGRF1Q13972 1273 aa7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 CPSF6Q16630 551 aaKnown RBP eCLIP7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 ANKRD39Q53RE8 183 aa7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 TMC3Q7Z5M5 1100 aa7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 SPACA3Q8IXA5 215 aa7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 ZNF513Q8N8E2 541 aaPredicted RBP7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 FGD4Q96M96 766 aa7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 PIM2Q9P1W9 311 aa7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 LEMD3Q9Y2U8 911 aa7.84□□□□□ -1.15
HMGCS1-207ENST00000514610 LOC105371045A0A1W2PR82 267 aa7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 SHISA3A0PJX4 238 aa7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 GNAT3A8MTJ3 354 aa7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 TGFB1P01137 390 aa7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 CD247P20963 164 aa7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 NFE2L2Q16236 605 aa7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 SLC10A6Q3KNW5 377 aa7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 HEATR6Q6AI08 1181 aaKnown RBP7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 LRP10Q7Z4F1 713 aa7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 SLC51AQ86UW1 340 aa7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 PLD6Q8N2A8 252 aaKnown RBP7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 GP6Q9HCN6 339 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms