RNA–Protein interactions for RNA: ENST00000514382.5

CCND3-220, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-220ENST00000514382 DEFB123Q8N688 67 aa16.37■□□□□ 0.21
CCND3-220ENST00000514382 MOV10L1Q9BXT6 1211 aaKnown RBP16.37■□□□□ 0.21
CCND3-220ENST00000514382 MTMR10Q9NXD2 777 aa16.37■□□□□ 0.21
CCND3-220ENST00000514382 ZBED9Q6R2W3 1325 aa16.37■□□□□ 0.21
CCND3-220ENST00000514382 GOLIM4O00461 696 aa16.36■□□□□ 0.21
CCND3-220ENST00000514382 AKR1B1P15121 316 aa16.36■□□□□ 0.21
CCND3-220ENST00000514382 MAP3K12Q12852 859 aa16.36■□□□□ 0.21
CCND3-220ENST00000514382 LRIT3Q3SXY7 679 aa16.36■□□□□ 0.21
CCND3-220ENST00000514382 PRAMEF19Q5SWL8 479 aa16.36■□□□□ 0.21
CCND3-220ENST00000514382 SLC9C2Q5TAH2 1124 aa16.36■□□□□ 0.21
CCND3-220ENST00000514382 UBE2OQ9C0C9 1292 aaKnown RBP16.36■□□□□ 0.21
CCND3-220ENST00000514382 ARMT1Q9H993 441 aa16.36■□□□□ 0.21
CCND3-220ENST00000514382 DCP1AQ9NPI6 582 aaPredicted RBP16.36■□□□□ 0.21
CCND3-220ENST00000514382 MCM3APO60318 1980 aa16.35■□□□□ 0.21
CCND3-220ENST00000514382 DLL1O00548 723 aa16.35■□□□□ 0.21
CCND3-220ENST00000514382 POLR3DP05423 398 aaPredicted RBP16.35■□□□□ 0.21
CCND3-220ENST00000514382 HOXC6P09630 235 aa16.35■□□□□ 0.21
CCND3-220ENST00000514382 CYBAP13498 195 aa16.35■□□□□ 0.21
CCND3-220ENST00000514382 TTC6Q86TZ1 520 aa16.35■□□□□ 0.21
CCND3-220ENST00000514382 DNAJC2Q99543 621 aaKnown RBP16.35■□□□□ 0.21
CCND3-220ENST00000514382 SENP6Q9GZR1 1112 aaPredicted RBP16.35■□□□□ 0.21
CCND3-220ENST00000514382 MCM9Q9NXL9 1143 aa16.35■□□□□ 0.21
CCND3-220ENST00000514382 DDX20Q9UHI6 824 aaKnown RBP16.35■□□□□ 0.21
CCND3-220ENST00000514382 GJC2Q5T442 439 aaPredicted RBP16.34■□□□□ 0.21
CCND3-220ENST00000514382 CCAR1Q8IX12 1150 aaKnown RBP16.34■□□□□ 0.21
CCND3-220ENST00000514382 TRMT44Q8IYL2 757 aaKnown RBP16.34■□□□□ 0.21
CCND3-220ENST00000514382 SPICE1Q8N0Z3 855 aa16.34■□□□□ 0.21
CCND3-220ENST00000514382 GTF3C2Q8WUA4 911 aaPredicted RBP16.34■□□□□ 0.21
CCND3-220ENST00000514382 ATG4CQ96DT6 458 aa16.34■□□□□ 0.21
CCND3-220ENST00000514382 MPHOSPH10O00566 681 aaKnown RBP16.33■□□□□ 0.2
CCND3-220ENST00000514382 ERCC3P19447 782 aa16.33■□□□□ 0.2
CCND3-220ENST00000514382 ADORA2AP29274 412 aa16.33■□□□□ 0.2
CCND3-220ENST00000514382 CNGA1P29973 690 aa16.33■□□□□ 0.2
CCND3-220ENST00000514382 USP14P54578 494 aa16.33■□□□□ 0.2
CCND3-220ENST00000514382 FBXO28Q9NVF7 368 aa16.33■□□□□ 0.2
CCND3-220ENST00000514382 IGSF3O75054 1194 aa16.32■□□□□ 0.2
CCND3-220ENST00000514382 RTP1P59025 263 aa16.32■□□□□ 0.2
CCND3-220ENST00000514382 ATP2B2Q01814 1243 aa16.32■□□□□ 0.2
CCND3-220ENST00000514382 MFSD14CQ5VZR4 134 aa16.32■□□□□ 0.2
CCND3-220ENST00000514382 SH3RF1Q7Z6J0 888 aa16.32■□□□□ 0.2
CCND3-220ENST00000514382 GUCD1Q96NT3 240 aa16.32■□□□□ 0.2
CCND3-220ENST00000514382 TANGO6Q9C0B7 1094 aa16.32■□□□□ 0.2
CCND3-220ENST00000514382 SPATC1LQ9H0A9 340 aa16.32■□□□□ 0.2
CCND3-220ENST00000514382 CDH23Q9H251 3354 aa16.32■□□□□ 0.2
CCND3-220ENST00000514382 BOLA2Q9H3K6 86 aa16.32■□□□□ 0.2
CCND3-220ENST00000514382 CABP5Q9NP86 173 aa16.32■□□□□ 0.2
CCND3-220ENST00000514382 COG6Q9Y2V7 657 aa16.32■□□□□ 0.2
CCND3-220ENST00000514382 MYH4Q9Y623 1939 aa16.31■□□□□ 0.2
CCND3-220ENST00000514382 MBD4O95243 580 aa16.31■□□□□ 0.2
CCND3-220ENST00000514382 DSG3P32926 999 aa16.31■□□□□ 0.2
CCND3-220ENST00000514382 ADD2P35612 726 aa16.31■□□□□ 0.2
CCND3-220ENST00000514382 COG2Q14746 738 aa16.31■□□□□ 0.2
CCND3-220ENST00000514382 C9orf50Q5SZB4 431 aa16.31■□□□□ 0.2
CCND3-220ENST00000514382 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
CCND3-220ENST00000514382 LPAR1Q92633 364 aa16.31■□□□□ 0.2
CCND3-220ENST00000514382 FAM161BQ96MY7 647 aa16.31■□□□□ 0.2
CCND3-220ENST00000514382 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCND3-220ENST00000514382 CRNKL1Q9BZJ0 848 aaKnown RBP16.31■□□□□ 0.2
CCND3-220ENST00000514382 CWC22Q9HCG8 908 aaKnown RBP16.31■□□□□ 0.2
CCND3-220ENST00000514382 SMARCA5O60264 1052 aaPredicted RBP16.3■□□□□ 0.2
CCND3-220ENST00000514382 TAL1P17542 331 aaPredicted RBP16.3■□□□□ 0.2
CCND3-220ENST00000514382 ITGB8P26012 769 aa16.3■□□□□ 0.2
CCND3-220ENST00000514382 CCNA1P78396 465 aa16.3■□□□□ 0.2
CCND3-220ENST00000514382 TMEM132BQ14DG7 1078 aa16.3■□□□□ 0.2
CCND3-220ENST00000514382 ERC1Q8IUD2 1116 aa16.3■□□□□ 0.2
CCND3-220ENST00000514382 LENG1Q96BZ8 264 aaPredicted RBP16.3■□□□□ 0.2
CCND3-220ENST00000514382 ZBTB40Q9NUA8 1239 aa16.3■□□□□ 0.2
CCND3-220ENST00000514382 PRUNE2Q8WUY3 3088 aa16.3■□□□□ 0.2
CCND3-220ENST00000514382 POTEB2H3BUK9 544 aa16.29■□□□□ 0.2
CCND3-220ENST00000514382 IRX5P78411 483 aaPredicted RBP16.29■□□□□ 0.2
CCND3-220ENST00000514382 FAM47AQ5JRC9 791 aa16.29■□□□□ 0.2
CCND3-220ENST00000514382 C20orf194Q5TEA3 1177 aa16.29■□□□□ 0.2
CCND3-220ENST00000514382 GPR153Q6NV75 609 aa16.29■□□□□ 0.2
CCND3-220ENST00000514382 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCND3-220ENST00000514382 STXBP5LQ9Y2K9 1186 aa16.29■□□□□ 0.2
CCND3-220ENST00000514382 TMX2Q9Y320 296 aa16.29■□□□□ 0.2
CCND3-220ENST00000514382 TRIM43BA6NCK2 446 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 USP17L12C9JPN9 530 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 USP17L21D6R901 530 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 DNM1LO00429 736 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 PGK2P07205 417 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 CDK8P49336 464 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 TRIM60Q495X7 471 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 C12orf60Q5U649 245 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 OLFML2BQ68BL8 750 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 SLC39A5Q6ZMH5 540 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 TMEM179Q6ZVK1 233 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 DPP9Q86TI2 863 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 CERS3Q8IU89 383 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 REPS2Q8NFH8 660 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 FERMT2Q96AC1 680 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 TRIM43Q96BQ3 446 aaPredicted RBP16.28■□□□□ 0.2
CCND3-220ENST00000514382 PUS7LQ9H0K6 701 aaKnown RBP16.28■□□□□ 0.2
CCND3-220ENST00000514382 VCPKMTQ9H867 229 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 PAG1Q9NWQ8 432 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 ATP11BQ9Y2G3 1177 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 IVNS1ABPQ9Y6Y0 642 aa16.28■□□□□ 0.2
CCND3-220ENST00000514382 FLOT1O75955 427 aa16.27■□□□□ 0.2
CCND3-220ENST00000514382 GLRX3O76003 335 aaKnown RBP16.27■□□□□ 0.2
CCND3-220ENST00000514382 EEF2P13639 858 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms