RNA–Protein interactions for RNA: ENST00000513757.5

LPCAT1-205, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 4

Gene LPCAT1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-205ENST00000513757 SEPT2Q15019 361 aa11.86□□□□□ -0.51
LPCAT1-205ENST00000513757 SNX17Q15036 470 aa11.86□□□□□ -0.51
LPCAT1-205ENST00000513757 SLC39A5Q6ZMH5 540 aa11.86□□□□□ -0.51
LPCAT1-205ENST00000513757 ABRAQ8N0Z2 381 aa11.86□□□□□ -0.51
LPCAT1-205ENST00000513757 SPATC1LQ9H0A9 340 aa11.86□□□□□ -0.51
LPCAT1-205ENST00000513757 ATP11BQ9Y2G3 1177 aa11.86□□□□□ -0.51
LPCAT1-205ENST00000513757 DNAH12Q6ZR08 3092 aa11.86□□□□□ -0.51
LPCAT1-205ENST00000513757 UNC80Q8N2C7 3258 aa11.85□□□□□ -0.51
LPCAT1-205ENST00000513757 POLR3DP05423 398 aaPredicted RBP11.85□□□□□ -0.51
LPCAT1-205ENST00000513757 TTF1Q15361 905 aaPredicted RBP11.85□□□□□ -0.51
LPCAT1-205ENST00000513757 GJC2Q5T442 439 aaPredicted RBP11.85□□□□□ -0.51
LPCAT1-205ENST00000513757 C1orf53Q5VUE5 145 aa11.85□□□□□ -0.51
LPCAT1-205ENST00000513757 ERC1Q8IUD2 1116 aa11.85□□□□□ -0.51
LPCAT1-205ENST00000513757 CRNKL1Q9BZJ0 848 aaKnown RBP11.85□□□□□ -0.51
LPCAT1-205ENST00000513757 MROH8Q9H579 483 aa11.85□□□□□ -0.51
LPCAT1-205ENST00000513757 ANTXR1Q9H6X2 564 aa11.85□□□□□ -0.51
LPCAT1-205ENST00000513757 NCOR1O75376 2440 aa11.85□□□□□ -0.51
LPCAT1-205ENST00000513757 SMCHD1A6NHR9 2005 aa11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 MAGEB6P1A0A0J9YX57 407 aa11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 A0A1W2PRG0 241 aa11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 ERCC3P19447 782 aa11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 DSG3P32926 999 aa11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 SMAD3P84022 425 aaKnown RBP11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 SHHQ15465 462 aa11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 TMEM179Q6ZVK1 233 aa11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 FAM161BQ96MY7 647 aa11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 TANGO6Q9C0B7 1094 aa11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 C1orf115Q9H7X2 142 aa11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 NRBP1Q9UHY1 535 aa11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 ZNFX1Q9P2E3 1918 aaKnown RBP11.84□□□□□ -0.51
LPCAT1-205ENST00000513757 LAMA2P24043 3122 aaKnown RBP11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 MPHOSPH10O00566 681 aaKnown RBP11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 COBLO75128 1261 aa11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 TRIM60Q495X7 471 aa11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 AACSQ86V21 672 aa11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 FTSJ3Q8IY81 847 aaKnown RBP11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 CDX2Q99626 313 aaPredicted RBP11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 SEMA6BQ9H3T3 888 aa11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 SH2D4AQ9H788 454 aa11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 PRDM5Q9NQX1 630 aaPredicted RBP11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 PDLIM7Q9NR12 457 aa11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 MCM9Q9NXL9 1143 aa11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 SWAP70Q9UH65 585 aa11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 MYH8P13535 1937 aa11.83□□□□□ -0.52
LPCAT1-205ENST00000513757 PARP14Q460N5 1801 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 TMEM265A0A087WTH1 108 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 SLC25A27O95847 323 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 PDE6AP16499 860 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 LRRC41Q15345 812 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 HSP90AB4PQ58FF6 505 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 C9orf50Q5SZB4 431 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 SLC9C2Q5TAH2 1124 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 ITPRIPQ8IWB1 547 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 BADQ92934 168 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 MAML3Q96JK9 1138 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 ARHGEF10LQ9HCE6 1279 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 PHF24Q9UPV7 400 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 TMX2Q9Y320 296 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 MYO9BQ13459 2157 aa11.82□□□□□ -0.52
LPCAT1-205ENST00000513757 ROBO3Q96MS0 1386 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 WDR46O15213 610 aaKnown RBP11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 FLOT1O75955 427 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 FCER1AP12319 257 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 ADCYAP1R1P41586 468 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 PLS1Q14651 629 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 FAM47AQ5JRC9 791 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 ANO1Q5XXA6 986 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 CEP85Q6P2H3 762 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 NCAPG2Q86XI2 1143 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 MAFAQ8NHW3 353 aaPredicted RBP11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 ATG4CQ96DT6 458 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 CCDC17Q96LX7 622 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 VCPKMTQ9H867 229 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 DCP1AQ9NPI6 582 aaPredicted RBP11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 TACC3Q9Y6A5 838 aa11.81□□□□□ -0.52
LPCAT1-205ENST00000513757 TCRBV5S4A2TA0A5A2 114 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 TRIM43BA6NCK2 446 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 RARBP10826 455 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 COPB2P35606 906 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 TLE2Q04725 743 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 ICA1Q05084 483 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 KIAA1755Q5JYT7 1200 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 PRAMEF19Q5SWL8 479 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 RNF180Q86T96 592 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 SLC44A5Q8NCS7 719 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 SDR42E1Q8WUS8 393 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 FERMT2Q96AC1 680 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 TRIM43Q96BQ3 446 aaPredicted RBP11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 XPNPEP3Q9NQH7 507 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 EXOC6BQ9Y2D4 811 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 DIS3Q9Y2L1 958 aaKnown RBP11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 ZNF532Q9HCE3 1301 aa11.8□□□□□ -0.52
LPCAT1-205ENST00000513757 PLXNA1Q9UIW2 1896 aa11.79□□□□□ -0.52
LPCAT1-205ENST00000513757 KIAA0355O15063 1070 aa11.79□□□□□ -0.52
LPCAT1-205ENST00000513757 CLTBP09497 229 aa11.79□□□□□ -0.52
LPCAT1-205ENST00000513757 RLBP1P12271 317 aa11.79□□□□□ -0.52
LPCAT1-205ENST00000513757 EVX2Q03828 476 aa11.79□□□□□ -0.52
LPCAT1-205ENST00000513757 TMEM132BQ14DG7 1078 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms