RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CSRNP1Q96S65 589 aa5.84□□□□□ -1.47
PDLIM5-218ENST00000513341 LRP6O75581 1613 aa5.84□□□□□ -1.47
PDLIM5-218ENST00000513341 CCDC141Q6ZP82 1450 aa5.83□□□□□ -1.48
PDLIM5-218ENST00000513341 MTUS2Q5JR59 1369 aa5.83□□□□□ -1.48
PDLIM5-218ENST00000513341 AFF2P51816 1311 aa5.83□□□□□ -1.48
PDLIM5-218ENST00000513341 TCAF2A6NFQ2 919 aa5.83□□□□□ -1.48
PDLIM5-218ENST00000513341 AAMPQ13685 434 aa5.83□□□□□ -1.48
PDLIM5-218ENST00000513341 ZC3H12AQ5D1E8 599 aaKnown RBP5.83□□□□□ -1.48
PDLIM5-218ENST00000513341 NPAS4Q8IUM7 802 aa5.83□□□□□ -1.48
PDLIM5-218ENST00000513341 EPB41L4BQ9H329 900 aa5.83□□□□□ -1.48
PDLIM5-218ENST00000513341 ABCB6Q9NP58 842 aa5.83□□□□□ -1.48
PDLIM5-218ENST00000513341 PRDM10Q9NQV6 1147 aa5.83□□□□□ -1.48
PDLIM5-218ENST00000513341 TBX22Q9Y458 520 aa5.83□□□□□ -1.48
PDLIM5-218ENST00000513341 AHDC1Q5TGY3 1603 aaPredicted RBP5.82□□□□□ -1.48
PDLIM5-218ENST00000513341 TIAM1Q13009 1591 aa5.82□□□□□ -1.48
PDLIM5-218ENST00000513341 NWD1Q149M9 1564 aa5.82□□□□□ -1.48
PDLIM5-218ENST00000513341 ATF3P18847 181 aa5.82□□□□□ -1.48
PDLIM5-218ENST00000513341 IDI1Q13907 227 aa5.82□□□□□ -1.48
PDLIM5-218ENST00000513341 C22orf34Q6ZV56 151 aa5.82□□□□□ -1.48
PDLIM5-218ENST00000513341 PDZD3Q86UT5 571 aa5.82□□□□□ -1.48
PDLIM5-218ENST00000513341 DIRC2Q96SL1 478 aa5.82□□□□□ -1.48
PDLIM5-218ENST00000513341 EHD4Q9H223 541 aa5.82□□□□□ -1.48
PDLIM5-218ENST00000513341 PARD6AQ9NPB6 346 aa5.82□□□□□ -1.48
PDLIM5-218ENST00000513341 SLC52A1Q9NWF4 448 aa5.82□□□□□ -1.48
PDLIM5-218ENST00000513341 SMG5Q9UPR3 1016 aaKnown RBP5.82□□□□□ -1.48
PDLIM5-218ENST00000513341 EIF2AK4Q9P2K8 1649 aaKnown RBP5.81□□□□□ -1.48
PDLIM5-218ENST00000513341 CHD2O14647 1828 aaKnown RBP5.81□□□□□ -1.48
PDLIM5-218ENST00000513341 ETV2O00321 342 aaPredicted RBP5.81□□□□□ -1.48
PDLIM5-218ENST00000513341 LINC00310P59036 64 aa5.81□□□□□ -1.48
PDLIM5-218ENST00000513341 PBXIP1Q96AQ6 731 aa5.81□□□□□ -1.48
PDLIM5-218ENST00000513341 DCP1AQ9NPI6 582 aaPredicted RBP5.81□□□□□ -1.48
PDLIM5-218ENST00000513341 SEMA3GQ9NS98 782 aa5.81□□□□□ -1.48
PDLIM5-218ENST00000513341 MAPK8IP1Q9UQF2 711 aa5.81□□□□□ -1.48
PDLIM5-218ENST00000513341 CEP162Q5TB80 1403 aa5.81□□□□□ -1.48
PDLIM5-218ENST00000513341 SETD5Q9C0A6 1442 aa5.81□□□□□ -1.48
PDLIM5-218ENST00000513341 ARHGEF5Q12774 1597 aa5.8□□□□□ -1.48
PDLIM5-218ENST00000513341 EFCAB6Q5THR3 1501 aa5.8□□□□□ -1.48
PDLIM5-218ENST00000513341 GNAT3A8MTJ3 354 aa5.8□□□□□ -1.48
PDLIM5-218ENST00000513341 FAAP100Q0VG06 881 aa5.8□□□□□ -1.48
PDLIM5-218ENST00000513341 CARS2Q9HA77 564 aaKnown RBP5.8□□□□□ -1.48
PDLIM5-218ENST00000513341 SSU72Q9NP77 194 aaKnown RBP5.8□□□□□ -1.48
PDLIM5-218ENST00000513341 CCDC87Q9NVE4 849 aa5.8□□□□□ -1.48
PDLIM5-218ENST00000513341 TRPC5Q9UL62 973 aaPredicted RBP5.8□□□□□ -1.48
PDLIM5-218ENST00000513341 RGS12O14924 1447 aa5.8□□□□□ -1.48
PDLIM5-218ENST00000513341 PIK3R4Q99570 1358 aa5.8□□□□□ -1.48
PDLIM5-218ENST00000513341 PIK3C2BO00750 1634 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 MROH1Q8NDA8 1641 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 TMEM238LA0A1B0GVL6 79 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 NUAK1O60285 661 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 EOMESO95936 686 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 SSFA2P28290 1259 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 FKBP4Q02790 459 aaKnown RBP eCLIP5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 MTMR3Q13615 1198 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 BRINP3Q76B58 766 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 C14orf37Q86TY3 774 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 C8orf37Q96NL8 207 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 FOXQ1Q9C009 403 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 ZC3H12CQ9C0D7 883 aaKnown RBP5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 CACNA2D2Q9NY47 1150 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 TRAK1Q9UPV9 953 aa5.79□□□□□ -1.48
PDLIM5-218ENST00000513341 FOXD2O60548 495 aaPredicted RBP5.78□□□□□ -1.48
PDLIM5-218ENST00000513341 PPP1R15AO75807 674 aaPredicted RBP5.78□□□□□ -1.48
PDLIM5-218ENST00000513341 PPP2R3AQ06190 1150 aa5.78□□□□□ -1.48
PDLIM5-218ENST00000513341 DIP2AQ14689 1571 aa5.78□□□□□ -1.48
PDLIM5-218ENST00000513341 USPL1Q5W0Q7 1092 aa5.78□□□□□ -1.48
PDLIM5-218ENST00000513341 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.78□□□□□ -1.48
PDLIM5-218ENST00000513341 MTMR7Q9Y216 660 aa5.78□□□□□ -1.48
PDLIM5-218ENST00000513341 MAST1Q9Y2H9 1570 aa5.78□□□□□ -1.48
PDLIM5-218ENST00000513341 SETBP1Q9Y6X0 1596 aa5.78□□□□□ -1.48
PDLIM5-218ENST00000513341 EHBP1L1Q8N3D4 1523 aa5.78□□□□□ -1.48
PDLIM5-218ENST00000513341 PLEKHG1Q9ULL1 1385 aa5.78□□□□□ -1.48
PDLIM5-218ENST00000513341 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.77□□□□□ -1.49
PDLIM5-218ENST00000513341 NTF4P34130 210 aa5.77□□□□□ -1.49
PDLIM5-218ENST00000513341 THAP5Q7Z6K1 395 aa5.77□□□□□ -1.49
PDLIM5-218ENST00000513341 ALPK1Q96QP1 1244 aa5.77□□□□□ -1.49
PDLIM5-218ENST00000513341 PRDM5Q9NQX1 630 aaPredicted RBP5.77□□□□□ -1.49
PDLIM5-218ENST00000513341 DUOX2Q9NRD8 1548 aa5.77□□□□□ -1.49
PDLIM5-218ENST00000513341 KANK1Q14678 1352 aa5.77□□□□□ -1.49
PDLIM5-218ENST00000513341 CEP152O94986 1710 aa5.77□□□□□ -1.49
PDLIM5-218ENST00000513341 DCCP43146 1447 aa5.76□□□□□ -1.49
PDLIM5-218ENST00000513341 CPNE3O75131 537 aaKnown RBP5.76□□□□□ -1.49
PDLIM5-218ENST00000513341 RAC2P15153 192 aa5.76□□□□□ -1.49
PDLIM5-218ENST00000513341 SYN1P17600 705 aa5.76□□□□□ -1.49
PDLIM5-218ENST00000513341 RING1Q06587 406 aa5.76□□□□□ -1.49
PDLIM5-218ENST00000513341 ABHD4Q8TB40 342 aa5.76□□□□□ -1.49
PDLIM5-218ENST00000513341 KCNN1Q92952 543 aa5.76□□□□□ -1.49
PDLIM5-218ENST00000513341 ATP13A1Q9HD20 1204 aa5.76□□□□□ -1.49
PDLIM5-218ENST00000513341 NPHS2Q9NP85 383 aa5.76□□□□□ -1.49
PDLIM5-218ENST00000513341 TMEM39AQ9NV64 488 aa5.76□□□□□ -1.49
PDLIM5-218ENST00000513341 LRP5O75197 1615 aa5.75□□□□□ -1.49
PDLIM5-218ENST00000513341 A0A0G2JLL6 359 aaPredicted RBP5.75□□□□□ -1.49
PDLIM5-218ENST00000513341 KCT2Q8NC54 265 aa5.75□□□□□ -1.49
PDLIM5-218ENST00000513341 KCNB2Q92953 911 aa5.75□□□□□ -1.49
PDLIM5-218ENST00000513341 HSPA12BQ96MM6 686 aa5.75□□□□□ -1.49
PDLIM5-218ENST00000513341 KCNC2Q96PR1 638 aa5.75□□□□□ -1.49
PDLIM5-218ENST00000513341 DNAJC25Q9H1X3 360 aa5.75□□□□□ -1.49
PDLIM5-218ENST00000513341 NOS1P29475 1434 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 BLMP54132 1417 aaPredicted RBP5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 PTCH1Q13635 1447 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 ERBINQ96RT1 1412 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms