RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 TTLL1O95922 423 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 SNHG28P0DPA3 235 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 SEPT2Q15019 361 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 NBPF12Q5TAG4 269 aaPredicted RBP10.9□□□□□ -0.66
DHFR-206ENST00000513048 CLEC17AQ6ZS10 378 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 MIGA2Q7L4E1 593 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 RASGRP2Q7LDG7 609 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 TNPO1Q92973 898 aaKnown RBP10.9□□□□□ -0.66
DHFR-206ENST00000513048 TRIM34Q9BYJ4 488 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 KANSL2Q9H9L4 492 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 RBM28Q9NW13 759 aaKnown RBP10.9□□□□□ -0.66
DHFR-206ENST00000513048 NYAP2Q9P242 653 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 MAD2L2Q9UI95 211 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 STX8Q9UNK0 236 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 PPP2R3BQ9Y5P8 575 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 ATAD5Q96QE3 1844 aa10.9□□□□□ -0.66
DHFR-206ENST00000513048 PAPPA2Q9BXP8 1791 aa10.9□□□□□ -0.67
DHFR-206ENST00000513048 CCDC196A0A1B0GTZ2 297 aa10.89□□□□□ -0.67
DHFR-206ENST00000513048 PALM3A6NDB9 673 aaPredicted RBP10.89□□□□□ -0.67
DHFR-206ENST00000513048 UBE2Q2LH0YL09 131 aa10.89□□□□□ -0.67
DHFR-206ENST00000513048 MPHOSPH10O00566 681 aaKnown RBP10.89□□□□□ -0.67
DHFR-206ENST00000513048 CPLX1O14810 134 aa10.89□□□□□ -0.67
DHFR-206ENST00000513048 CDKL5O76039 1030 aa10.89□□□□□ -0.67
DHFR-206ENST00000513048 FMNL1O95466 1100 aaPredicted RBP10.89□□□□□ -0.67
DHFR-206ENST00000513048 GH2P01242 217 aa10.89□□□□□ -0.67
DHFR-206ENST00000513048 EEF2P13639 858 aaKnown RBP10.89□□□□□ -0.67
DHFR-206ENST00000513048 EPHX2P34913 555 aa10.89□□□□□ -0.67
DHFR-206ENST00000513048 CAP2P40123 477 aa10.89□□□□□ -0.67
DHFR-206ENST00000513048 LARP1BQ659C4 914 aaKnown RBP10.89□□□□□ -0.67
DHFR-206ENST00000513048 USP50Q70EL3 339 aaPredicted RBP10.89□□□□□ -0.67
DHFR-206ENST00000513048 CMTR1Q8N1G2 835 aaKnown RBP10.89□□□□□ -0.67
DHFR-206ENST00000513048 STAG2Q8N3U4 1231 aa10.89□□□□□ -0.67
DHFR-206ENST00000513048 SRBD1Q8N5C6 995 aaKnown RBP10.89□□□□□ -0.67
DHFR-206ENST00000513048 PHKBQ93100 1093 aa10.89□□□□□ -0.67
DHFR-206ENST00000513048 TAF1DQ9H5J8 278 aaPredicted RBP10.89□□□□□ -0.67
DHFR-206ENST00000513048 ORC3Q9UBD5 711 aaPredicted RBP10.89□□□□□ -0.67
DHFR-206ENST00000513048 CLIP2Q9UDT6 1046 aa10.89□□□□□ -0.67
DHFR-206ENST00000513048 ZNF112Q9UJU3 913 aa10.89□□□□□ -0.67
DHFR-206ENST00000513048 ZBTB21Q9ULJ3 1066 aa10.89□□□□□ -0.67
DHFR-206ENST00000513048 CNTNAP5Q8WYK1 1306 aa10.88□□□□□ -0.67
DHFR-206ENST00000513048 WDR33Q9C0J8 1336 aaKnown RBP10.88□□□□□ -0.67
DHFR-206ENST00000513048 MYH6P13533 1939 aa10.88□□□□□ -0.67
DHFR-206ENST00000513048 ZSCAN22P10073 491 aaPredicted RBP10.88□□□□□ -0.67
DHFR-206ENST00000513048 PDHBP11177 359 aa10.88□□□□□ -0.67
DHFR-206ENST00000513048 PDCP20941 246 aa10.88□□□□□ -0.67
DHFR-206ENST00000513048 PKN1Q16512 942 aa10.88□□□□□ -0.67
DHFR-206ENST00000513048 PPP4R3BQ5MIZ7 849 aa10.88□□□□□ -0.67
DHFR-206ENST00000513048 PRAMEF18Q5VWM3 479 aa10.88□□□□□ -0.67
DHFR-206ENST00000513048 CPLX2Q6PUV4 134 aaKnown RBP10.88□□□□□ -0.67
DHFR-206ENST00000513048 LRRC47Q8N1G4 583 aaKnown RBP10.88□□□□□ -0.67
DHFR-206ENST00000513048 RGS22Q8NE09 1264 aa10.88□□□□□ -0.67
DHFR-206ENST00000513048 CTCFLQ8NI51 663 aaPredicted RBP10.88□□□□□ -0.67
DHFR-206ENST00000513048 ZC3H15Q8WU90 426 aaKnown RBP10.88□□□□□ -0.67
DHFR-206ENST00000513048 AIFM3Q96NN9 605 aa10.88□□□□□ -0.67
DHFR-206ENST00000513048 SYNPO2Q9UMS6 1093 aa10.88□□□□□ -0.67
DHFR-206ENST00000513048 DOCK1Q14185 1865 aa10.87□□□□□ -0.67
DHFR-206ENST00000513048 A0A1W2PRG0 241 aa10.87□□□□□ -0.67
DHFR-206ENST00000513048 USP17L5A8MUK1 530 aa10.87□□□□□ -0.67
DHFR-206ENST00000513048 PRPF3O43395 683 aaKnown RBP10.87□□□□□ -0.67
DHFR-206ENST00000513048 PDIA4P13667 645 aaKnown RBP10.87□□□□□ -0.67
DHFR-206ENST00000513048 KIF5BP33176 963 aa10.87□□□□□ -0.67
DHFR-206ENST00000513048 ICA1Q05084 483 aa10.87□□□□□ -0.67
DHFR-206ENST00000513048 SSRP1Q08945 709 aaKnown RBP10.87□□□□□ -0.67
DHFR-206ENST00000513048 DLK2Q6UY11 383 aa10.87□□□□□ -0.67
DHFR-206ENST00000513048 CDC37L1Q7L3B6 337 aa10.87□□□□□ -0.67
DHFR-206ENST00000513048 FAM184AQ8NB25 1140 aa10.87□□□□□ -0.67
DHFR-206ENST00000513048 SHISA4Q96DD7 197 aa10.87□□□□□ -0.67
DHFR-206ENST00000513048 SLC26A6Q9BXS9 759 aa10.87□□□□□ -0.67
DHFR-206ENST00000513048 RNF26Q9BY78 433 aaPredicted RBP10.87□□□□□ -0.67
DHFR-206ENST00000513048 CABP5Q9NP86 173 aa10.87□□□□□ -0.67
DHFR-206ENST00000513048 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.87□□□□□ -0.67
DHFR-206ENST00000513048 BAZ2BQ9UIF8 2168 aaKnown RBP10.86□□□□□ -0.67
DHFR-206ENST00000513048 IQCA1LA6NCM1 817 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 ADM5C9JUS6 153 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 CYTH3O43739 400 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 CTNND1O60716 968 aaKnown RBP10.86□□□□□ -0.67
DHFR-206ENST00000513048 F13A1P00488 732 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 GOLGA8HP0CJ92 632 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 SMARCA1P28370 1054 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 INPP5BP32019 993 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 GNAQP50148 359 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 ZNF543Q08ER8 600 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 RESTQ13127 1097 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 FOXD4L5Q5VV16 416 aaPredicted RBP10.86□□□□□ -0.67
DHFR-206ENST00000513048 DCAF15Q66K64 600 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 USP17L2Q6R6M4 530 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 GMCL1P1Q8NEA9 526 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 FBXO18Q8NFZ0 1043 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 ACER1Q8TDN7 264 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 FOXD4L4Q8WXT5 416 aaPredicted RBP10.86□□□□□ -0.67
DHFR-206ENST00000513048 DCPSQ96C86 337 aaKnown RBP10.86□□□□□ -0.67
DHFR-206ENST00000513048 HOOK2Q96ED9 719 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 DCBLD2Q96PD2 775 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 ALG1Q9BT22 464 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 ZNF341Q9BYN7 854 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 GJB4Q9NTQ9 266 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 GINM1Q9NU53 330 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 PHIPQ8WWQ0 1821 aa10.86□□□□□ -0.67
DHFR-206ENST00000513048 OTOFQ9HC10 1997 aa10.85□□□□□ -0.67
DHFR-206ENST00000513048 VPS37CA5D8V6 355 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms