RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 ZNF516Q92618 1163 aa11.68□□□□□ -0.54
TRIO-220ENST00000512979 COPRSQ9NQ92 184 aa11.68□□□□□ -0.54
TRIO-220ENST00000512979 SFI1A8K8P3 1242 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 IPO8O15397 1037 aaKnown RBP11.67□□□□□ -0.54
TRIO-220ENST00000512979 SRGAP3O43295 1099 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 LDHBP07195 334 aaKnown RBP11.67□□□□□ -0.54
TRIO-220ENST00000512979 PRDX5P30044 214 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 ADORA1P30542 326 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 CRHR2Q13324 411 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 HOOK2Q96ED9 719 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 PRIMPOLQ96LW4 560 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 WRNIP1Q96S55 665 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 PTPN18Q99952 460 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 DENND2AQ9ULE3 1009 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 DAGLAQ9Y4D2 1042 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 TRIM17Q9Y577 477 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 OTOFQ9HC10 1997 aa11.67□□□□□ -0.54
TRIO-220ENST00000512979 CCL15-CCL14A0A0B4J2E2 113 aa11.66□□□□□ -0.54
TRIO-220ENST00000512979 BCAR3O75815 825 aa11.66□□□□□ -0.54
TRIO-220ENST00000512979 TRIM27P14373 513 aa11.66□□□□□ -0.54
TRIO-220ENST00000512979 GTF2A2P52657 109 aa11.66□□□□□ -0.54
TRIO-220ENST00000512979 OCLNQ16625 522 aa11.66□□□□□ -0.54
TRIO-220ENST00000512979 CCL15Q16663 113 aa11.66□□□□□ -0.54
TRIO-220ENST00000512979 DCAF15Q66K64 600 aa11.66□□□□□ -0.54
TRIO-220ENST00000512979 BRI3BPQ8WY22 251 aa11.66□□□□□ -0.54
TRIO-220ENST00000512979 FRAT1Q92837 279 aaPredicted RBP11.66□□□□□ -0.54
TRIO-220ENST00000512979 BIN2Q9UBW5 565 aaPredicted RBP11.66□□□□□ -0.54
TRIO-220ENST00000512979 PCDHGA11Q9Y5H2 935 aa11.66□□□□□ -0.54
TRIO-220ENST00000512979 SNCAIPQ9Y6H5 919 aa11.66□□□□□ -0.54
TRIO-220ENST00000512979 RPAP1Q9BWH6 1393 aaPredicted RBP11.66□□□□□ -0.54
TRIO-220ENST00000512979 SALL1Q9NSC2 1324 aa11.65□□□□□ -0.54
TRIO-220ENST00000512979 RBM47A0AV96 593 aaKnown RBP11.65□□□□□ -0.54
TRIO-220ENST00000512979 TIMM10P62072 90 aa11.65□□□□□ -0.54
TRIO-220ENST00000512979 TCP10Q12799 353 aa11.65□□□□□ -0.54
TRIO-220ENST00000512979 CDC42EP5Q6NZY7 148 aa11.65□□□□□ -0.54
TRIO-220ENST00000512979 ATF7IPQ6VMQ6 1270 aa11.65□□□□□ -0.54
TRIO-220ENST00000512979 MIGA2Q7L4E1 593 aa11.65□□□□□ -0.54
TRIO-220ENST00000512979 OTOP1Q7RTM1 612 aa11.65□□□□□ -0.54
TRIO-220ENST00000512979 CD99L2Q8TCZ2 262 aa11.65□□□□□ -0.54
TRIO-220ENST00000512979 FAM151AQ8WW52 585 aa11.65□□□□□ -0.54
TRIO-220ENST00000512979 ZKSCAN4Q969J2 545 aaPredicted RBP11.65□□□□□ -0.54
TRIO-220ENST00000512979 ERO1AQ96HE7 468 aa11.65□□□□□ -0.54
TRIO-220ENST00000512979 CXXC1Q9P0U4 656 aaPredicted RBP11.65□□□□□ -0.54
TRIO-220ENST00000512979 TNNQ9UQP3 1299 aa11.65□□□□□ -0.54
TRIO-220ENST00000512979 PCDHB11Q9Y5F2 797 aa11.65□□□□□ -0.54
TRIO-220ENST00000512979 A0A1B0GUL7 405 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 GNAI2P04899 355 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 MARSP56192 900 aaKnown RBP11.64□□□□□ -0.55
TRIO-220ENST00000512979 SP3Q02447 781 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 TFCP2Q12800 502 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 NFIAQ12857 509 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 MTX1Q13505 466 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 RASGRF1Q13972 1273 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 TAF1CQ15572 869 aaPredicted RBP11.64□□□□□ -0.55
TRIO-220ENST00000512979 NBPF20Q3BBV1 942 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 TJAP1Q5JTD0 557 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 ERO1BQ86YB8 467 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 ZGPATQ8N5A5 531 aaKnown RBP11.64□□□□□ -0.55
TRIO-220ENST00000512979 XAGE2Q96GT9 111 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 ZNF341Q9BYN7 854 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 ZFYVE28Q9HCC9 887 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 USP40Q9NVE5 1235 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 AKAP2Q9Y2D5 859 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 FCF1Q9Y324 198 aaKnown RBP11.64□□□□□ -0.55
TRIO-220ENST00000512979 MYH13Q9UKX3 1938 aa11.64□□□□□ -0.55
TRIO-220ENST00000512979 LGR5O75473 907 aa11.63□□□□□ -0.55
TRIO-220ENST00000512979 S1PR4O95977 384 aa11.63□□□□□ -0.55
TRIO-220ENST00000512979 ERCC3P19447 782 aa11.63□□□□□ -0.55
TRIO-220ENST00000512979 USP4Q13107 963 aa11.63□□□□□ -0.55
TRIO-220ENST00000512979 TAS1R3Q7RTX0 852 aa11.63□□□□□ -0.55
TRIO-220ENST00000512979 DZIP1Q86YF9 867 aaKnown RBP11.63□□□□□ -0.55
TRIO-220ENST00000512979 FAM43AQ8N2R8 423 aa11.63□□□□□ -0.55
TRIO-220ENST00000512979 EFCC1Q9HA90 598 aa11.63□□□□□ -0.55
TRIO-220ENST00000512979 ABCF2Q9UG63 623 aa11.63□□□□□ -0.55
TRIO-220ENST00000512979 LAMB1P07942 1786 aa11.63□□□□□ -0.55
TRIO-220ENST00000512979 ESPNB1AK53 854 aa11.62□□□□□ -0.55
TRIO-220ENST00000512979 ABL1P00519 1130 aa11.62□□□□□ -0.55
TRIO-220ENST00000512979 CETPP11597 493 aa11.62□□□□□ -0.55
TRIO-220ENST00000512979 INPP5BP32019 993 aa11.62□□□□□ -0.55
TRIO-220ENST00000512979 HNRNPUQ00839 825 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRIO-220ENST00000512979 PPIL2Q13356 520 aa11.62□□□□□ -0.55
TRIO-220ENST00000512979 SNAPC2Q13487 334 aa11.62□□□□□ -0.55
TRIO-220ENST00000512979 MVPQ14764 893 aaKnown RBP11.62□□□□□ -0.55
TRIO-220ENST00000512979 TMEM57Q8N5G2 664 aa11.62□□□□□ -0.55
TRIO-220ENST00000512979 NEUROD6Q96NK8 337 aa11.62□□□□□ -0.55
TRIO-220ENST00000512979 C1QTNF2Q9BXJ5 285 aa11.62□□□□□ -0.55
TRIO-220ENST00000512979 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.62□□□□□ -0.55
TRIO-220ENST00000512979 GAKO14976 1311 aa11.61□□□□□ -0.55
TRIO-220ENST00000512979 PDS5AQ29RF7 1337 aaKnown RBP11.61□□□□□ -0.55
TRIO-220ENST00000512979 PNMA6EA0A0J9YXQ4 647 aa11.61□□□□□ -0.55
TRIO-220ENST00000512979 BTBD19C9JJ37 291 aa11.61□□□□□ -0.55
TRIO-220ENST00000512979 WDHD1O75717 1129 aaPredicted RBP11.61□□□□□ -0.55
TRIO-220ENST00000512979 CAP1Q01518 475 aa11.61□□□□□ -0.55
TRIO-220ENST00000512979 PPATQ06203 517 aa11.61□□□□□ -0.55
TRIO-220ENST00000512979 G3BP1Q13283 466 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRIO-220ENST00000512979 ZKSCAN2Q63HK3 967 aa11.61□□□□□ -0.55
TRIO-220ENST00000512979 SPTY2D1Q68D10 685 aaPredicted RBP11.61□□□□□ -0.55
TRIO-220ENST00000512979 ZFPM1Q8IX07 1006 aa11.61□□□□□ -0.55
TRIO-220ENST00000512979 HINFPQ9BQA5 517 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms