RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 SERTAD1Q9UHV2 236 aa11.48□□□□□ -0.57
SNF8-211ENST00000512243 ZNRF3Q9ULT6 936 aa11.48□□□□□ -0.57
SNF8-211ENST00000512243 DOCK2Q92608 1830 aa11.48□□□□□ -0.57
SNF8-211ENST00000512243 COL1A1P02452 1464 aaPredicted RBP11.47□□□□□ -0.57
SNF8-211ENST00000512243 YDJCA8MPS7 323 aa11.47□□□□□ -0.57
SNF8-211ENST00000512243 SLURP2P0DP57 97 aa11.47□□□□□ -0.57
SNF8-211ENST00000512243 MX1P20591 662 aa11.47□□□□□ -0.57
SNF8-211ENST00000512243 CHAF1AQ13111 956 aaPredicted RBP11.47□□□□□ -0.57
SNF8-211ENST00000512243 NCOA4Q13772 614 aa11.47□□□□□ -0.57
SNF8-211ENST00000512243 EML3Q32P44 896 aa11.47□□□□□ -0.57
SNF8-211ENST00000512243 FOXR1Q6PIV2 292 aa11.47□□□□□ -0.57
SNF8-211ENST00000512243 TDRD7Q8NHU6 1098 aaKnown RBP11.47□□□□□ -0.57
SNF8-211ENST00000512243 DENND2AQ9ULE3 1009 aa11.47□□□□□ -0.57
SNF8-211ENST00000512243 IQSEC3Q9UPP2 1182 aaPredicted RBP11.47□□□□□ -0.57
SNF8-211ENST00000512243 GTF3C3Q9Y5Q9 886 aa11.47□□□□□ -0.57
SNF8-211ENST00000512243 TTC41PQ6P2S7 1318 aa11.46□□□□□ -0.57
SNF8-211ENST00000512243 USP17L3A6NCW0 530 aa11.46□□□□□ -0.57
SNF8-211ENST00000512243 USP17L4A6NCW7 530 aa11.46□□□□□ -0.57
SNF8-211ENST00000512243 FZD9O00144 591 aa11.46□□□□□ -0.57
SNF8-211ENST00000512243 RAD17O75943 681 aa11.46□□□□□ -0.57
SNF8-211ENST00000512243 CIAPIN1Q6FI81 312 aa11.46□□□□□ -0.57
SNF8-211ENST00000512243 USP17L1Q7RTZ2 530 aa11.46□□□□□ -0.57
SNF8-211ENST00000512243 RHBDD1Q8TEB9 315 aa11.46□□□□□ -0.57
SNF8-211ENST00000512243 MYH2Q9UKX2 1941 aa11.46□□□□□ -0.58
SNF8-211ENST00000512243 AOX1Q06278 1338 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 PDS5AQ29RF7 1337 aaKnown RBP11.45□□□□□ -0.58
SNF8-211ENST00000512243 FAM205AQ6ZU69 1335 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 SALL3Q9BXA9 1300 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 ZNF541Q9H0D2 1346 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 A0A1B0GTH6 734 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 USP17L5A8MUK1 530 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 TMEM229AB2RXF0 380 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 ERC2O15083 957 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 THBS1P07996 1170 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 MCAMP43121 646 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 PLA2G4AP47712 749 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 GTF2IP78347 998 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 RASGRF1Q13972 1273 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 TNIP1Q15025 636 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 TTLL5Q6EMB2 1281 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 C16orf71Q8IYS4 520 aaPredicted RBP11.45□□□□□ -0.58
SNF8-211ENST00000512243 OTUD7AQ8TE49 926 aaPredicted RBP11.45□□□□□ -0.58
SNF8-211ENST00000512243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.45□□□□□ -0.58
SNF8-211ENST00000512243 ZNF512BQ96KM6 892 aaPredicted RBP11.45□□□□□ -0.58
SNF8-211ENST00000512243 RUBCNLQ9H714 662 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 ECHDC1Q9NTX5 307 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 JAG2Q9Y219 1238 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 PCDHGA11Q9Y5H2 935 aa11.45□□□□□ -0.58
SNF8-211ENST00000512243 SCN4AP35499 1836 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 PSMD14O00487 310 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 ATP5JP18859 108 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 PDE1AP54750 535 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 SRSF11Q05519 484 aaKnown RBP11.44□□□□□ -0.58
SNF8-211ENST00000512243 CXCL9Q07325 125 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 STRIP1Q5VSL9 837 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 TSHZ3Q63HK5 1081 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 ZGPATQ8N5A5 531 aaKnown RBP11.44□□□□□ -0.58
SNF8-211ENST00000512243 SPATA5Q8NB90 893 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 WDR66Q8TBY9 1149 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 TBC1D22AQ8WUA7 517 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 TRERF1Q96PN7 1200 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 NOD1Q9Y239 953 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 GJA3Q9Y6H8 435 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 ECM29Q5VYK3 1845 aa11.44□□□□□ -0.58
SNF8-211ENST00000512243 WDR90Q96KV7 1748 aa11.43□□□□□ -0.58
SNF8-211ENST00000512243 MYO3BQ8WXR4 1341 aa11.43□□□□□ -0.58
SNF8-211ENST00000512243 GLRX3O76003 335 aaKnown RBP11.43□□□□□ -0.58
SNF8-211ENST00000512243 MSX1P28360 303 aa11.43□□□□□ -0.58
SNF8-211ENST00000512243 FKBP1AP62942 108 aaKnown RBP11.43□□□□□ -0.58
SNF8-211ENST00000512243 MFSD14BQ5SR56 506 aa11.43□□□□□ -0.58
SNF8-211ENST00000512243 DNAJC2Q99543 621 aaKnown RBP11.43□□□□□ -0.58
SNF8-211ENST00000512243 BOLA2Q9H3K6 86 aa11.43□□□□□ -0.58
SNF8-211ENST00000512243 KCNQ5Q9NR82 932 aa11.43□□□□□ -0.58
SNF8-211ENST00000512243 HMG20BQ9P0W2 317 aa11.43□□□□□ -0.58
SNF8-211ENST00000512243 STAP2Q9UGK3 403 aa11.43□□□□□ -0.58
SNF8-211ENST00000512243 ADAMTSL1Q8N6G6 1762 aa11.42□□□□□ -0.58
SNF8-211ENST00000512243 VIL1P09327 827 aaKnown RBP11.42□□□□□ -0.58
SNF8-211ENST00000512243 ZAP70P43403 619 aa11.42□□□□□ -0.58
SNF8-211ENST00000512243 SMTNP53814 917 aa11.42□□□□□ -0.58
SNF8-211ENST00000512243 DACT2Q5SW24 774 aa11.42□□□□□ -0.58
SNF8-211ENST00000512243 PI16Q6UXB8 463 aa11.42□□□□□ -0.58
SNF8-211ENST00000512243 PLEKHM2Q8IWE5 1019 aa11.42□□□□□ -0.58
SNF8-211ENST00000512243 GPC2Q8N158 579 aa11.42□□□□□ -0.58
SNF8-211ENST00000512243 PI4K2BQ8TCG2 481 aa11.42□□□□□ -0.58
SNF8-211ENST00000512243 UCN2Q96RP3 112 aa11.42□□□□□ -0.58
SNF8-211ENST00000512243 HAUS7Q99871 368 aa11.42□□□□□ -0.58
SNF8-211ENST00000512243 MAST3O60307 1309 aa11.41□□□□□ -0.58
SNF8-211ENST00000512243 SALL1Q9NSC2 1324 aa11.41□□□□□ -0.58
SNF8-211ENST00000512243 RPS12P25398 132 aaKnown RBP11.41□□□□□ -0.58
SNF8-211ENST00000512243 TTF1Q15361 905 aaPredicted RBP11.41□□□□□ -0.58
SNF8-211ENST00000512243 SPTY2D1Q68D10 685 aaPredicted RBP11.41□□□□□ -0.58
SNF8-211ENST00000512243 LYPD4Q6UWN0 246 aa11.41□□□□□ -0.58
SNF8-211ENST00000512243 AGBL3Q8NEM8 1001 aa11.41□□□□□ -0.58
SNF8-211ENST00000512243 MXD3Q9BW11 206 aa11.41□□□□□ -0.58
SNF8-211ENST00000512243 PAG1Q9NWQ8 432 aa11.41□□□□□ -0.58
SNF8-211ENST00000512243 ABCF2Q9UG63 623 aa11.41□□□□□ -0.58
SNF8-211ENST00000512243 SUGT1Q9Y2Z0 365 aa11.41□□□□□ -0.58
SNF8-211ENST00000512243 USP3Q9Y6I4 520 aa11.41□□□□□ -0.58
SNF8-211ENST00000512243 GLTPD2A6NH11 291 aa11.4□□□□□ -0.58
SNF8-211ENST00000512243 GOLIM4O00461 696 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms