RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 NACAP1Q9BZK3 213 aa19.69■□□□□ 0.74
DDX41-213ENST00000512027 NAPBQ9H115 298 aa19.69■□□□□ 0.74
DDX41-213ENST00000512027 MKNK2Q9HBH9 465 aa19.69■□□□□ 0.74
DDX41-213ENST00000512027 ARHGEF10LQ9HCE6 1279 aa19.69■□□□□ 0.74
DDX41-213ENST00000512027 TMX2Q9Y320 296 aa19.69■□□□□ 0.74
DDX41-213ENST00000512027 ERVK-9P63128 1117 aa19.68■□□□□ 0.74
DDX41-213ENST00000512027 ERVK-24P63145 666 aa19.68■□□□□ 0.74
DDX41-213ENST00000512027 ZNF589Q86UQ0 364 aaPredicted RBP19.68■□□□□ 0.74
DDX41-213ENST00000512027 GPRC5AQ8NFJ5 357 aa19.68■□□□□ 0.74
DDX41-213ENST00000512027 COA7Q96BR5 231 aa19.68■□□□□ 0.74
DDX41-213ENST00000512027 TANGO6Q9C0B7 1094 aa19.68■□□□□ 0.74
DDX41-213ENST00000512027 PORCNQ9H237 461 aa19.68■□□□□ 0.74
DDX41-213ENST00000512027 OSBPL3Q9H4L5 887 aa19.68■□□□□ 0.74
DDX41-213ENST00000512027 COL11A1P12107 1806 aaPredicted RBP19.67■□□□□ 0.74
DDX41-213ENST00000512027 SPDYE16A6NNV3 312 aaPredicted RBP19.67■□□□□ 0.74
DDX41-213ENST00000512027 ADCY3O60266 1144 aa19.67■□□□□ 0.74
DDX41-213ENST00000512027 EN2P19622 333 aaPredicted RBP19.67■□□□□ 0.74
DDX41-213ENST00000512027 CTDSPL2Q05D32 466 aa19.67■□□□□ 0.74
DDX41-213ENST00000512027 PPARAQ07869 468 aa19.67■□□□□ 0.74
DDX41-213ENST00000512027 VCPKMTQ9H867 229 aa19.67■□□□□ 0.74
DDX41-213ENST00000512027 INCENPQ9NQS7 918 aa19.67■□□□□ 0.74
DDX41-213ENST00000512027 HELLSQ9NRZ9 838 aa19.67■□□□□ 0.74
DDX41-213ENST00000512027 BTBD7Q9P203 1132 aa19.67■□□□□ 0.74
DDX41-213ENST00000512027 BIN2Q9UBW5 565 aaPredicted RBP19.67■□□□□ 0.74
DDX41-213ENST00000512027 TACC3Q9Y6A5 838 aa19.67■□□□□ 0.74
DDX41-213ENST00000512027 RAD21O60216 631 aa19.66■□□□□ 0.74
DDX41-213ENST00000512027 SAMD1Q6SPF0 538 aaPredicted RBP19.66■□□□□ 0.74
DDX41-213ENST00000512027 KANSL2Q9H9L4 492 aa19.66■□□□□ 0.74
DDX41-213ENST00000512027 MCMDC2Q4G0Z9 681 aa19.65■□□□□ 0.74
DDX41-213ENST00000512027 FAM47AQ5JRC9 791 aa19.65■□□□□ 0.74
DDX41-213ENST00000512027 TMEM106CQ9BVX2 250 aa19.65■□□□□ 0.74
DDX41-213ENST00000512027 SH2D4AQ9H788 454 aa19.65■□□□□ 0.74
DDX41-213ENST00000512027 GJD2Q9UKL4 321 aa19.65■□□□□ 0.74
DDX41-213ENST00000512027 MKI67P46013 3256 aaKnown RBP19.65■□□□□ 0.74
DDX41-213ENST00000512027 IGKV6D-41A0A0C4DH26 115 aa19.64■□□□□ 0.73
DDX41-213ENST00000512027 SDSP20132 328 aa19.64■□□□□ 0.73
DDX41-213ENST00000512027 ZNF444Q8N0Y2 327 aaPredicted RBP19.64■□□□□ 0.73
DDX41-213ENST00000512027 SLAIN1Q8ND83 568 aa19.64■□□□□ 0.73
DDX41-213ENST00000512027 GTF3C2Q8WUA4 911 aaPredicted RBP19.64■□□□□ 0.73
DDX41-213ENST00000512027 RABGAP1Q9Y3P9 1069 aa19.64■□□□□ 0.73
DDX41-213ENST00000512027 PDE4DIPQ5VU43 2346 aa19.63■□□□□ 0.73
DDX41-213ENST00000512027 CCDC171Q6TFL3 1326 aa19.63■□□□□ 0.73
DDX41-213ENST00000512027 INHAP05111 366 aa19.63■□□□□ 0.73
DDX41-213ENST00000512027 IRF5Q13568 498 aa19.63■□□□□ 0.73
DDX41-213ENST00000512027 LPAR1Q92633 364 aa19.63■□□□□ 0.73
DDX41-213ENST00000512027 ATG4CQ96DT6 458 aa19.63■□□□□ 0.73
DDX41-213ENST00000512027 CEP95Q96GE4 821 aa19.63■□□□□ 0.73
DDX41-213ENST00000512027 NUP88Q99567 741 aaPredicted RBP19.63■□□□□ 0.73
DDX41-213ENST00000512027 UNC93B1Q9H1C4 597 aa19.63■□□□□ 0.73
DDX41-213ENST00000512027 FBXO28Q9NVF7 368 aa19.63■□□□□ 0.73
DDX41-213ENST00000512027 WDR46O15213 610 aaKnown RBP19.62■□□□□ 0.73
DDX41-213ENST00000512027 FLOT1O75955 427 aa19.62■□□□□ 0.73
DDX41-213ENST00000512027 HSPD1P10809 573 aaKnown RBP19.62■□□□□ 0.73
DDX41-213ENST00000512027 CCL5P13501 91 aa19.62■□□□□ 0.73
DDX41-213ENST00000512027 GSPT1P15170 499 aaKnown RBP19.62■□□□□ 0.73
DDX41-213ENST00000512027 CYP2B6P20813 491 aa19.62■□□□□ 0.73
DDX41-213ENST00000512027 PDE4BQ07343 736 aa19.62■□□□□ 0.73
DDX41-213ENST00000512027 TRIM32Q13049 653 aa19.62■□□□□ 0.73
DDX41-213ENST00000512027 COG2Q14746 738 aa19.62■□□□□ 0.73
DDX41-213ENST00000512027 FAM83BQ5T0W9 1011 aa19.62■□□□□ 0.73
DDX41-213ENST00000512027 WDR78Q5VTH9 848 aa19.62■□□□□ 0.73
DDX41-213ENST00000512027 LBX2Q6XYB7 198 aa19.62■□□□□ 0.73
DDX41-213ENST00000512027 GPR142Q7Z601 462 aa19.62■□□□□ 0.73
DDX41-213ENST00000512027 CCAR1Q8IX12 1150 aaKnown RBP19.62■□□□□ 0.73
DDX41-213ENST00000512027 CLIP2Q9UDT6 1046 aa19.62■□□□□ 0.73
DDX41-213ENST00000512027 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.62■□□□□ 0.73
DDX41-213ENST00000512027 LAMA4Q16363 1823 aa19.62■□□□□ 0.73
DDX41-213ENST00000512027 FGAP02671 866 aa19.61■□□□□ 0.73
DDX41-213ENST00000512027 TSPY3P0CV98 308 aa19.61■□□□□ 0.73
DDX41-213ENST00000512027 TSPY8P0CW00 308 aa19.61■□□□□ 0.73
DDX41-213ENST00000512027 MAPK4P31152 587 aa19.61■□□□□ 0.73
DDX41-213ENST00000512027 DSG3P32926 999 aa19.61■□□□□ 0.73
DDX41-213ENST00000512027 CWC27Q6UX04 472 aaKnown RBP19.61■□□□□ 0.73
DDX41-213ENST00000512027 LRRC47Q8N1G4 583 aaKnown RBP19.61■□□□□ 0.73
DDX41-213ENST00000512027 PXYLP1Q8TE99 480 aa19.61■□□□□ 0.73
DDX41-213ENST00000512027 ZNF287Q9HBT7 754 aa19.61■□□□□ 0.73
DDX41-213ENST00000512027 CWC22Q9HCG8 908 aaKnown RBP19.61■□□□□ 0.73
DDX41-213ENST00000512027 GOPCQ9HD26 462 aa19.61■□□□□ 0.73
DDX41-213ENST00000512027 NYAP2Q9P242 653 aa19.61■□□□□ 0.73
DDX41-213ENST00000512027 PLIN4Q96Q06 1357 aa19.6■□□□□ 0.73
DDX41-213ENST00000512027 SLC3A2P08195 630 aaKnown RBP19.6■□□□□ 0.73
DDX41-213ENST00000512027 HAND2P61296 217 aa19.6■□□□□ 0.73
DDX41-213ENST00000512027 UBXN2AP68543 259 aa19.6■□□□□ 0.73
DDX41-213ENST00000512027 TFAP4Q01664 338 aa19.6■□□□□ 0.73
DDX41-213ENST00000512027 TTC22Q5TAA0 569 aa19.6■□□□□ 0.73
DDX41-213ENST00000512027 PLEKHH3Q7Z736 793 aa19.6■□□□□ 0.73
DDX41-213ENST00000512027 TRIB2Q92519 343 aa19.6■□□□□ 0.73
DDX41-213ENST00000512027 CHMP4CQ96CF2 233 aa19.6■□□□□ 0.73
DDX41-213ENST00000512027 SHISA4Q96DD7 197 aa19.6■□□□□ 0.73
DDX41-213ENST00000512027 RNF208Q9H0X6 261 aa19.6■□□□□ 0.73
DDX41-213ENST00000512027 DIAPH3Q9NSV4 1193 aa19.6■□□□□ 0.73
DDX41-213ENST00000512027 MTMR4Q9NYA4 1195 aa19.6■□□□□ 0.73
DDX41-213ENST00000512027 NMT2O60551 498 aa19.59■□□□□ 0.73
DDX41-213ENST00000512027 NDUFB10O96000 172 aa19.59■□□□□ 0.73
DDX41-213ENST00000512027 ALX1Q15699 326 aa19.59■□□□□ 0.73
DDX41-213ENST00000512027 NEDD1Q8NHV4 660 aa19.59■□□□□ 0.73
DDX41-213ENST00000512027 NUDT12Q9BQG2 462 aa19.59■□□□□ 0.73
DDX41-213ENST00000512027 MOV10L1Q9BXT6 1211 aaKnown RBP19.59■□□□□ 0.73
DDX41-213ENST00000512027 IL25Q9H293 177 aa19.59■□□□□ 0.73
DDX41-213ENST00000512027 HOXC10Q9NYD6 342 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms